RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 TSPY10P0CW01 314 aa13.44□□□□□ -0.26
KCNMA1-259ENST00000639406 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
KCNMA1-259ENST00000639406 HMGN5P82970 282 aaKnown RBP13.43□□□□□ -0.26
KCNMA1-259ENST00000639406 UQCRHLA0A096LP55 91 aa13.43□□□□□ -0.26
KCNMA1-259ENST00000639406 UQCRHP07919 91 aa13.43□□□□□ -0.26
KCNMA1-259ENST00000639406 PLCD4Q9BRC7 762 aa13.43□□□□□ -0.26
KCNMA1-259ENST00000639406 RUFY1Q96T51 708 aa13.42□□□□□ -0.26
KCNMA1-259ENST00000639406 DEF6Q9H4E7 631 aa13.42□□□□□ -0.26
KCNMA1-259ENST00000639406 CCDC173Q0VFZ6 552 aa13.41□□□□□ -0.26
KCNMA1-259ENST00000639406 FOXD4L6Q3SYB3 417 aaPredicted RBP13.41□□□□□ -0.26
KCNMA1-259ENST00000639406 FOXD4L3Q6VB84 417 aaPredicted RBP13.41□□□□□ -0.26
KCNMA1-259ENST00000639406 ATP6V1DQ9Y5K8 247 aa13.41□□□□□ -0.26
KCNMA1-259ENST00000639406 KTN1Q86UP2 1357 aaKnown RBP13.4□□□□□ -0.26
KCNMA1-259ENST00000639406 KIF3AQ9Y496 699 aa13.4□□□□□ -0.26
KCNMA1-259ENST00000639406 TSR1Q2NL82 804 aaKnown RBP13.4□□□□□ -0.26
KCNMA1-259ENST00000639406 EXOC6Q8TAG9 804 aa13.4□□□□□ -0.26
KCNMA1-259ENST00000639406 PRDM10Q9NQV6 1147 aa13.4□□□□□ -0.26
KCNMA1-259ENST00000639406 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
KCNMA1-259ENST00000639406 PLEKHD1A6NEE1 506 aa13.39□□□□□ -0.27
KCNMA1-259ENST00000639406 TSPYL1Q9H0U9 437 aa13.39□□□□□ -0.27
KCNMA1-259ENST00000639406 TPM1P09493 284 aa13.39□□□□□ -0.27
KCNMA1-259ENST00000639406 CDR1P51861 262 aa13.39□□□□□ -0.27
KCNMA1-259ENST00000639406 HMMRO75330 724 aa13.39□□□□□ -0.27
KCNMA1-259ENST00000639406 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
KCNMA1-259ENST00000639406 PDE3BQ13370 1112 aa13.38□□□□□ -0.27
KCNMA1-259ENST00000639406 TPD52L1Q16890 204 aaPredicted RBP13.38□□□□□ -0.27
KCNMA1-259ENST00000639406 TRIM6-TRIM34B2RNG4 842 aa13.37□□□□□ -0.27
KCNMA1-259ENST00000639406 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
KCNMA1-259ENST00000639406 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
KCNMA1-259ENST00000639406 SF3A1Q15459 793 aaKnown RBP13.37□□□□□ -0.27
KCNMA1-259ENST00000639406 BAZ1BQ9UIG0 1483 aaKnown RBP13.37□□□□□ -0.27
KCNMA1-259ENST00000639406 ERICH4A6NGS2 130 aa13.37□□□□□ -0.27
KCNMA1-259ENST00000639406 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
KCNMA1-259ENST00000639406 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
KCNMA1-259ENST00000639406 TRAK2O60296 914 aa13.37□□□□□ -0.27
KCNMA1-259ENST00000639406 USP8P40818 1118 aa13.36□□□□□ -0.27
KCNMA1-259ENST00000639406 RALBP1Q15311 655 aa13.36□□□□□ -0.27
KCNMA1-259ENST00000639406 ERCC4Q92889 916 aaPredicted RBP13.36□□□□□ -0.27
KCNMA1-259ENST00000639406 CEP89Q96ST8 783 aa13.36□□□□□ -0.27
KCNMA1-259ENST00000639406 RRP1P56182 461 aaKnown RBP13.36□□□□□ -0.27
KCNMA1-259ENST00000639406 TMF1P82094 1093 aa13.36□□□□□ -0.27
KCNMA1-259ENST00000639406 PES1O00541 588 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-259ENST00000639406 FRAT2O75474 233 aaPredicted RBP13.35□□□□□ -0.27
KCNMA1-259ENST00000639406 PDS5BQ9NTI5 1447 aa13.35□□□□□ -0.27
KCNMA1-259ENST00000639406 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
KCNMA1-259ENST00000639406 PDCL3Q9H2J4 239 aa13.34□□□□□ -0.27
KCNMA1-259ENST00000639406 GIMAP7Q8NHV1 300 aa13.34□□□□□ -0.27
KCNMA1-259ENST00000639406 GOLGA3Q08378 1498 aa13.34□□□□□ -0.27
KCNMA1-259ENST00000639406 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
KCNMA1-259ENST00000639406 GOLGA2Q08379 1002 aa13.34□□□□□ -0.27
KCNMA1-259ENST00000639406 MEX3CQ5U5Q3 659 aaKnown RBP13.34□□□□□ -0.27
KCNMA1-259ENST00000639406 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
KCNMA1-259ENST00000639406 ZHX1Q9UKY1 873 aaPredicted RBP13.33□□□□□ -0.28
KCNMA1-259ENST00000639406 H3BQV1 296 aa13.33□□□□□ -0.28
KCNMA1-259ENST00000639406 IFFO2Q5TF58 517 aa13.33□□□□□ -0.28
KCNMA1-259ENST00000639406 GPATCH11Q8N954 259 aa13.32□□□□□ -0.28
KCNMA1-259ENST00000639406 CGNQ9P2M7 1197 aaKnown RBP13.32□□□□□ -0.28
KCNMA1-259ENST00000639406 CENPJQ9HC77 1338 aaPredicted RBP13.31□□□□□ -0.28
KCNMA1-259ENST00000639406 RASSF8Q8NHQ8 419 aa13.31□□□□□ -0.28
KCNMA1-259ENST00000639406 NUCB2P80303 420 aa13.31□□□□□ -0.28
KCNMA1-259ENST00000639406 CLUAP1Q96AJ1 413 aa13.31□□□□□ -0.28
KCNMA1-259ENST00000639406 CBX1P83916 185 aa13.31□□□□□ -0.28
KCNMA1-259ENST00000639406 MLECQ14165 292 aa13.31□□□□□ -0.28
KCNMA1-259ENST00000639406 ESPNB1AK53 854 aa13.3□□□□□ -0.28
KCNMA1-259ENST00000639406 PLIN1O60240 522 aa13.3□□□□□ -0.28
KCNMA1-259ENST00000639406 KIAA0754O94854 1291 aa13.3□□□□□ -0.28
KCNMA1-259ENST00000639406 SMC4Q9NTJ3 1288 aa13.3□□□□□ -0.28
KCNMA1-259ENST00000639406 SKIDA1Q1XH10 827 aa13.3□□□□□ -0.28
KCNMA1-259ENST00000639406 RNF214Q8ND24 703 aa13.3□□□□□ -0.28
KCNMA1-259ENST00000639406 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
KCNMA1-259ENST00000639406 GORABQ5T7V8 394 aa13.29□□□□□ -0.28
KCNMA1-259ENST00000639406 SASS6Q6UVJ0 657 aa13.29□□□□□ -0.28
KCNMA1-259ENST00000639406 RSF1Q96T23 1441 aaPredicted RBP13.29□□□□□ -0.28
KCNMA1-259ENST00000639406 IPO7O95373 1038 aaKnown RBP13.29□□□□□ -0.28
KCNMA1-259ENST00000639406 MORC1Q86VD1 984 aa13.29□□□□□ -0.28
KCNMA1-259ENST00000639406 GRPEL1Q9HAV7 217 aa13.29□□□□□ -0.28
KCNMA1-259ENST00000639406 CCDC9Q9Y3X0 531 aaKnown RBP13.29□□□□□ -0.28
KCNMA1-259ENST00000639406 CHMP3Q9Y3E7 222 aa13.29□□□□□ -0.28
KCNMA1-259ENST00000639406 ZBED9Q6R2W3 1325 aa13.28□□□□□ -0.28
KCNMA1-259ENST00000639406 PDCL2Q8N4E4 241 aa13.28□□□□□ -0.28
KCNMA1-259ENST00000639406 PRM3Q9NNZ6 103 aa13.28□□□□□ -0.28
KCNMA1-259ENST00000639406 DYDC1Q8WWB3 177 aa13.28□□□□□ -0.28
KCNMA1-259ENST00000639406 CALCOCO1Q9P1Z2 691 aa13.27□□□□□ -0.28
KCNMA1-259ENST00000639406 IRX3P78415 501 aaPredicted RBP13.27□□□□□ -0.28
KCNMA1-259ENST00000639406 GPATCH3Q96I76 525 aa13.27□□□□□ -0.29
KCNMA1-259ENST00000639406 AXDND1Q5T1B0 1012 aaPredicted RBP13.26□□□□□ -0.29
KCNMA1-259ENST00000639406 TSPY26PQ9H489 355 aa13.26□□□□□ -0.29
KCNMA1-259ENST00000639406 E9PSI1 815 aa13.26□□□□□ -0.29
KCNMA1-259ENST00000639406 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
KCNMA1-259ENST00000639406 CAVIN1Q6NZI2 390 aaKnown RBP13.26□□□□□ -0.29
KCNMA1-259ENST00000639406 FAM184AQ8NB25 1140 aa13.26□□□□□ -0.29
KCNMA1-259ENST00000639406 TMX4Q9H1E5 349 aaPredicted RBP13.26□□□□□ -0.29
KCNMA1-259ENST00000639406 NEFHP12036 1026 aa13.26□□□□□ -0.29
KCNMA1-259ENST00000639406 TNIKQ9UKE5 1360 aa13.25□□□□□ -0.29
KCNMA1-259ENST00000639406 CCDC112Q8NEF3 446 aa13.25□□□□□ -0.29
KCNMA1-259ENST00000639406 BICD2Q8TD16 824 aa13.25□□□□□ -0.29
KCNMA1-259ENST00000639406 ISY1Q9ULR0 285 aaKnown RBP13.25□□□□□ -0.29
KCNMA1-259ENST00000639406 LETM1O95202 739 aaPredicted RBP13.24□□□□□ -0.29
KCNMA1-259ENST00000639406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-259ENST00000639406 CCNB3Q8WWL7 1395 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms