RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 ZBED9Q6R2W3 1325 aa23.01■■□□□ 1.27
SCARB2-213ENST00000638680 ISY1Q9ULR0 285 aaKnown RBP23.01■■□□□ 1.27
SCARB2-213ENST00000638680 GPATCH3Q96I76 525 aa23.01■■□□□ 1.27
SCARB2-213ENST00000638680 RRP7AQ9Y3A4 280 aaKnown RBP23■■□□□ 1.27
SCARB2-213ENST00000638680 PRKRIP1Q9H875 184 aaPredicted RBP23■■□□□ 1.27
SCARB2-213ENST00000638680 SPAG9O60271 1321 aaKnown RBP23■■□□□ 1.27
SCARB2-213ENST00000638680 PAK3O75914 559 aaPredicted RBP22.98■■□□□ 1.27
SCARB2-213ENST00000638680 DDX49Q9Y6V7 483 aaKnown RBP22.97■■□□□ 1.27
SCARB2-213ENST00000638680 NOC3LQ8WTT2 800 aaKnown RBP22.96■■□□□ 1.27
SCARB2-213ENST00000638680 PANK3Q9H999 370 aa22.96■■□□□ 1.27
SCARB2-213ENST00000638680 ST20-MTHFSA0A0A6YYL1 179 aa22.95■■□□□ 1.27
SCARB2-213ENST00000638680 BCL2L13Q9BXK5 485 aa22.95■■□□□ 1.26
SCARB2-213ENST00000638680 TERF2IPQ9NYB0 399 aa22.94■■□□□ 1.26
SCARB2-213ENST00000638680 FHOD3Q2V2M9 1422 aa22.94■■□□□ 1.26
SCARB2-213ENST00000638680 ZNF330Q9Y3S2 320 aaPredicted RBP22.93■■□□□ 1.26
SCARB2-213ENST00000638680 SKOR2Q2VWA4 1001 aaPredicted RBP22.93■■□□□ 1.26
SCARB2-213ENST00000638680 KIF16BQ96L93 1317 aa22.93■■□□□ 1.26
SCARB2-213ENST00000638680 HNRNPMP52272 730 aaKnown RBP eCLIP22.92■■□□□ 1.26
SCARB2-213ENST00000638680 GOLGA6L1Q8N7Z2 621 aa22.92■■□□□ 1.26
SCARB2-213ENST00000638680 CARMIL2Q6F5E8 1435 aa22.92■■□□□ 1.26
SCARB2-213ENST00000638680 GORABQ5T7V8 394 aa22.92■■□□□ 1.26
SCARB2-213ENST00000638680 CHMP3Q9Y3E7 222 aa22.92■■□□□ 1.26
SCARB2-213ENST00000638680 ANKRD45Q5TZF3 282 aa22.91■■□□□ 1.26
SCARB2-213ENST00000638680 VSIG10Q8N0Z9 540 aa22.91■■□□□ 1.26
SCARB2-213ENST00000638680 LMOD3Q0VAK6 560 aa22.89■■□□□ 1.26
SCARB2-213ENST00000638680 COG6Q9Y2V7 657 aa22.89■■□□□ 1.26
SCARB2-213ENST00000638680 E9PSI1 815 aa22.89■■□□□ 1.25
SCARB2-213ENST00000638680 RAPGEF2Q9Y4G8 1499 aa22.88■■□□□ 1.25
SCARB2-213ENST00000638680 NUTM2DQ5VT03 806 aaPredicted RBP22.88■■□□□ 1.25
SCARB2-213ENST00000638680 CHMP4AQ9BY43 222 aa22.88■■□□□ 1.25
SCARB2-213ENST00000638680 FOXD4L6Q3SYB3 417 aaPredicted RBP22.88■■□□□ 1.25
SCARB2-213ENST00000638680 FOXD4L3Q6VB84 417 aaPredicted RBP22.88■■□□□ 1.25
SCARB2-213ENST00000638680 CCDC34Q96HJ3 373 aa22.87■■□□□ 1.25
SCARB2-213ENST00000638680 EFCAB2Q5VUJ9 269 aa22.87■■□□□ 1.25
SCARB2-213ENST00000638680 ZKSCAN2Q63HK3 967 aa22.86■■□□□ 1.25
SCARB2-213ENST00000638680 CREBRFQ8IUR6 639 aa22.86■■□□□ 1.25
SCARB2-213ENST00000638680 KIF3BO15066 747 aa22.86■■□□□ 1.25
SCARB2-213ENST00000638680 HDAC5Q9UQL6 1122 aa22.86■■□□□ 1.25
SCARB2-213ENST00000638680 RILPL2Q969X0 211 aa22.85■■□□□ 1.25
SCARB2-213ENST00000638680 CSB-PGBD3P0DP91 1061 aa22.85■■□□□ 1.25
SCARB2-213ENST00000638680 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.85■■□□□ 1.25
SCARB2-213ENST00000638680 TDRD9Q8NDG6 1382 aaKnown RBP22.85■■□□□ 1.25
SCARB2-213ENST00000638680 CGNL1Q0VF96 1302 aa22.84■■□□□ 1.25
SCARB2-213ENST00000638680 ELL2O00472 640 aaPredicted RBP22.83■■□□□ 1.25
SCARB2-213ENST00000638680 USP47Q96K76 1375 aa22.82■■□□□ 1.24
SCARB2-213ENST00000638680 SF3A1Q15459 793 aaKnown RBP22.82■■□□□ 1.24
SCARB2-213ENST00000638680 TRAK1Q9UPV9 953 aa22.81■■□□□ 1.24
SCARB2-213ENST00000638680 TAF7LQ5H9L4 462 aa22.81■■□□□ 1.24
SCARB2-213ENST00000638680 CCDC18Q5T9S5 1454 aa22.81■■□□□ 1.24
SCARB2-213ENST00000638680 NCBP3Q53F19 620 aaKnown RBP22.81■■□□□ 1.24
SCARB2-213ENST00000638680 RASSF8Q8NHQ8 419 aa22.8■■□□□ 1.24
SCARB2-213ENST00000638680 H3BQV1 296 aa22.79■■□□□ 1.24
SCARB2-213ENST00000638680 IFFO2Q5TF58 517 aa22.79■■□□□ 1.24
SCARB2-213ENST00000638680 KIF3AQ9Y496 699 aa22.78■■□□□ 1.24
SCARB2-213ENST00000638680 WIZO95785 1651 aa22.78■■□□□ 1.24
SCARB2-213ENST00000638680 TPM3P06753 285 aa22.78■■□□□ 1.24
SCARB2-213ENST00000638680 A0A0U1RQG5 324 aaPredicted RBP22.78■■□□□ 1.24
SCARB2-213ENST00000638680 APAF1O14727 1248 aa22.77■■□□□ 1.24
SCARB2-213ENST00000638680 ATP6V1DQ9Y5K8 247 aa22.77■■□□□ 1.24
SCARB2-213ENST00000638680 CCDC144AA2RUR9 1427 aa22.77■■□□□ 1.24
SCARB2-213ENST00000638680 GOLGA6L19H0YKK7 550 aa22.77■■□□□ 1.24
SCARB2-213ENST00000638680 CHMP5Q9NZZ3 219 aa22.76■■□□□ 1.23
SCARB2-213ENST00000638680 TOP2AP11388 1531 aaKnown RBP22.75■■□□□ 1.23
SCARB2-213ENST00000638680 AMPHP49418 695 aa22.75■■□□□ 1.23
SCARB2-213ENST00000638680 BECN2A8MW95 431 aa22.74■■□□□ 1.23
SCARB2-213ENST00000638680 FAM184AQ8NB25 1140 aa22.74■■□□□ 1.23
SCARB2-213ENST00000638680 TOMM22Q9NS69 142 aa22.73■■□□□ 1.23
SCARB2-213ENST00000638680 LTV1Q96GA3 475 aaPredicted RBP22.73■■□□□ 1.23
SCARB2-213ENST00000638680 ZNF592Q92610 1267 aa22.72■■□□□ 1.23
SCARB2-213ENST00000638680 FAM13BQ9NYF5 915 aa22.72■■□□□ 1.23
SCARB2-213ENST00000638680 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
SCARB2-213ENST00000638680 CCAR2Q8N163 923 aaKnown RBP22.72■■□□□ 1.23
SCARB2-213ENST00000638680 PDE4CQ08493 712 aa22.71■■□□□ 1.23
SCARB2-213ENST00000638680 RSPH4AQ5TD94 716 aa22.71■■□□□ 1.23
SCARB2-213ENST00000638680 DDX19BQ9UMR2 479 aa22.71■■□□□ 1.23
SCARB2-213ENST00000638680 NFKBIBQ15653 356 aa22.7■■□□□ 1.22
SCARB2-213ENST00000638680 ZNF771Q7L3S4 317 aaPredicted RBP22.7■■□□□ 1.22
SCARB2-213ENST00000638680 NGDNQ8NEJ9 315 aaKnown RBP22.7■■□□□ 1.22
SCARB2-213ENST00000638680 RUSC2Q8N2Y8 1516 aa22.69■■□□□ 1.22
SCARB2-213ENST00000638680 CCDC9Q9Y3X0 531 aaKnown RBP22.69■■□□□ 1.22
SCARB2-213ENST00000638680 REC8O95072 547 aa22.68■■□□□ 1.22
SCARB2-213ENST00000638680 DZIP1LQ8IYY4 767 aaKnown RBP22.68■■□□□ 1.22
SCARB2-213ENST00000638680 PES1O00541 588 aaKnown RBP22.68■■□□□ 1.22
SCARB2-213ENST00000638680 WASHC2CQ9Y4E1 1318 aa22.68■■□□□ 1.22
SCARB2-213ENST00000638680 TPD52L1Q16890 204 aaPredicted RBP22.67■■□□□ 1.22
SCARB2-213ENST00000638680 NUTM2FA1L443 756 aa22.67■■□□□ 1.22
SCARB2-213ENST00000638680 DIAPH3Q9NSV4 1193 aa22.66■■□□□ 1.22
SCARB2-213ENST00000638680 MCTP1Q6DN14 999 aa22.66■■□□□ 1.22
SCARB2-213ENST00000638680 FAM43AQ8N2R8 423 aa22.66■■□□□ 1.22
SCARB2-213ENST00000638680 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.65■■□□□ 1.22
SCARB2-213ENST00000638680 CCDC7Q96M83 1385 aa22.63■■□□□ 1.21
SCARB2-213ENST00000638680 C22orf23Q9BZE7 217 aa22.62■■□□□ 1.21
SCARB2-213ENST00000638680 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
SCARB2-213ENST00000638680 KIF7Q2M1P5 1343 aa22.61■■□□□ 1.21
SCARB2-213ENST00000638680 ANO2Q9NQ90 1003 aa22.61■■□□□ 1.21
SCARB2-213ENST00000638680 TSR1Q2NL82 804 aaKnown RBP22.61■■□□□ 1.21
SCARB2-213ENST00000638680 CNTLNQ9NXG0 1405 aa22.6■■□□□ 1.21
SCARB2-213ENST00000638680 EVC2Q86UK5 1308 aa22.6■■□□□ 1.21
SCARB2-213ENST00000638680 SETQ01105 290 aaPredicted RBP22.6■■□□□ 1.21
SCARB2-213ENST00000638680 COG3Q96JB2 828 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms