RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 MROH2BQ7Z745 1585 aa7.65□□□□□ -1.18
CHD2-221ENST00000635856 ATAD2BQ9ULI0 1458 aa7.65□□□□□ -1.19
CHD2-221ENST00000635856 GOLGA6L6A8MZA4 724 aa7.65□□□□□ -1.19
CHD2-221ENST00000635856 RIPK4P57078 832 aa7.65□□□□□ -1.19
CHD2-221ENST00000635856 HMGN5P82970 282 aaKnown RBP7.65□□□□□ -1.19
CHD2-221ENST00000635856 CHAF1AQ13111 956 aaPredicted RBP7.65□□□□□ -1.19
CHD2-221ENST00000635856 ERCC6Q03468 1493 aa7.65□□□□□ -1.19
CHD2-221ENST00000635856 SOX12O15370 315 aa7.64□□□□□ -1.19
CHD2-221ENST00000635856 TRAK2O60296 914 aa7.64□□□□□ -1.19
CHD2-221ENST00000635856 YY1AP1Q9H869 796 aa7.64□□□□□ -1.19
CHD2-221ENST00000635856 KCNG1Q9UIX4 513 aa7.64□□□□□ -1.19
CHD2-221ENST00000635856 GOLGA6L22H0YM25 854 aa7.64□□□□□ -1.19
CHD2-221ENST00000635856 GTF2A1P52655 376 aaPredicted RBP7.64□□□□□ -1.19
CHD2-221ENST00000635856 GEMIN8Q9NWZ8 242 aaKnown RBP7.64□□□□□ -1.19
CHD2-221ENST00000635856 SMARCA4P51532 1647 aa7.64□□□□□ -1.19
CHD2-221ENST00000635856 IRX5P78411 483 aaPredicted RBP7.63□□□□□ -1.19
CHD2-221ENST00000635856 SLC20A2Q08357 652 aa7.63□□□□□ -1.19
CHD2-221ENST00000635856 GRIPAP1Q4V328 841 aa7.63□□□□□ -1.19
CHD2-221ENST00000635856 CFAP44Q96MT7 982 aa7.63□□□□□ -1.19
CHD2-221ENST00000635856 SSR1P43307 286 aaKnown RBP7.63□□□□□ -1.19
CHD2-221ENST00000635856 MMP14P50281 582 aa7.63□□□□□ -1.19
CHD2-221ENST00000635856 ZNF526Q8TF50 670 aaPredicted RBP7.63□□□□□ -1.19
CHD2-221ENST00000635856 PDS5BQ9NTI5 1447 aa7.63□□□□□ -1.19
CHD2-221ENST00000635856 EIF4G1Q04637 1599 aaKnown RBP7.62□□□□□ -1.19
CHD2-221ENST00000635856 HSP90AB3PQ58FF7 597 aa7.62□□□□□ -1.19
CHD2-221ENST00000635856 GOLGA6L1Q8N7Z2 621 aa7.62□□□□□ -1.19
CHD2-221ENST00000635856 ZBTB22O15209 634 aa7.62□□□□□ -1.19
CHD2-221ENST00000635856 SKOR2Q2VWA4 1001 aaPredicted RBP7.62□□□□□ -1.19
CHD2-221ENST00000635856 CTR9Q6PD62 1173 aa7.62□□□□□ -1.19
CHD2-221ENST00000635856 CEP120Q8N960 986 aa7.62□□□□□ -1.19
CHD2-221ENST00000635856 MYCBPQ99417 103 aaPredicted RBP7.62□□□□□ -1.19
CHD2-221ENST00000635856 FSD2A1L4K1 749 aa7.61□□□□□ -1.19
CHD2-221ENST00000635856 EFCC1Q9HA90 598 aa7.61□□□□□ -1.19
CHD2-221ENST00000635856 NASPP49321 788 aaPredicted RBP7.61□□□□□ -1.19
CHD2-221ENST00000635856 ATP1B4Q9UN42 357 aaPredicted RBP7.61□□□□□ -1.19
CHD2-221ENST00000635856 GOLIM4O00461 696 aa7.61□□□□□ -1.19
CHD2-221ENST00000635856 PDCL2Q8N4E4 241 aa7.6□□□□□ -1.19
CHD2-221ENST00000635856 MCM4P33991 863 aa7.6□□□□□ -1.19
CHD2-221ENST00000635856 NCAPD3P42695 1498 aa7.6□□□□□ -1.19
CHD2-221ENST00000635856 KIAA2012Q0VF49 1180 aa7.6□□□□□ -1.19
CHD2-221ENST00000635856 TMED8Q6PL24 325 aaPredicted RBP7.6□□□□□ -1.19
CHD2-221ENST00000635856 GBP4Q96PP9 640 aa7.6□□□□□ -1.19
CHD2-221ENST00000635856 FBLN2P98095 1184 aa7.59□□□□□ -1.19
CHD2-221ENST00000635856 SETQ01105 290 aaPredicted RBP7.59□□□□□ -1.19
CHD2-221ENST00000635856 EXOC6Q8TAG9 804 aa7.59□□□□□ -1.19
CHD2-221ENST00000635856 RBM28Q9NW13 759 aaKnown RBP7.59□□□□□ -1.19
CHD2-221ENST00000635856 TOP2AP11388 1531 aaKnown RBP7.59□□□□□ -1.19
CHD2-221ENST00000635856 GPATCH11Q8N954 259 aa7.59□□□□□ -1.19
CHD2-221ENST00000635856 SMG6Q86US8 1419 aaKnown RBP7.58□□□□□ -1.2
CHD2-221ENST00000635856 MCM5P33992 734 aa7.58□□□□□ -1.2
CHD2-221ENST00000635856 GABPB1Q06547 395 aaPredicted RBP7.58□□□□□ -1.2
CHD2-221ENST00000635856 BICRAQ9NZM4 1560 aa7.58□□□□□ -1.2
CHD2-221ENST00000635856 TDO2P48775 406 aa7.57□□□□□ -1.2
CHD2-221ENST00000635856 XPCQ01831 940 aaPredicted RBP7.57□□□□□ -1.2
CHD2-221ENST00000635856 HS1BP3Q53T59 392 aa7.57□□□□□ -1.2
CHD2-221ENST00000635856 CHMP5Q9NZZ3 219 aa7.57□□□□□ -1.2
CHD2-221ENST00000635856 ERBB4Q15303 1308 aa7.57□□□□□ -1.2
CHD2-221ENST00000635856 SPDYE4A6NLX3 237 aa7.57□□□□□ -1.2
CHD2-221ENST00000635856 NGEFQ8N5V2 710 aa7.57□□□□□ -1.2
CHD2-221ENST00000635856 AKNAQ7Z591 1439 aa7.57□□□□□ -1.2
CHD2-221ENST00000635856 CADPSQ9ULU8 1353 aa7.57□□□□□ -1.2
CHD2-221ENST00000635856 IGSF3O75054 1194 aa7.57□□□□□ -1.2
CHD2-221ENST00000635856 RRP1P56182 461 aaKnown RBP7.57□□□□□ -1.2
CHD2-221ENST00000635856 FAM43BQ6ZT52 329 aaPredicted RBP7.57□□□□□ -1.2
CHD2-221ENST00000635856 TNIKQ9UKE5 1360 aa7.57□□□□□ -1.2
CHD2-221ENST00000635856 LOC102724159A0A0B4J2E5 919 aa7.57□□□□□ -1.2
CHD2-221ENST00000635856 PWP2Q15269 919 aaKnown RBP7.57□□□□□ -1.2
CHD2-221ENST00000635856 CCDC39Q9UFE4 941 aa7.57□□□□□ -1.2
CHD2-221ENST00000635856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.56□□□□□ -1.2
CHD2-221ENST00000635856 PRIMPOLQ96LW4 560 aa7.56□□□□□ -1.2
CHD2-221ENST00000635856 FEZ1Q99689 392 aa7.56□□□□□ -1.2
CHD2-221ENST00000635856 SMC4Q9NTJ3 1288 aa7.56□□□□□ -1.2
CHD2-221ENST00000635856 CHMP4CQ96CF2 233 aa7.56□□□□□ -1.2
CHD2-221ENST00000635856 DEF6Q9H4E7 631 aa7.56□□□□□ -1.2
CHD2-221ENST00000635856 TONSLQ96HA7 1378 aa7.56□□□□□ -1.2
CHD2-221ENST00000635856 NOM1Q5C9Z4 860 aaKnown RBP7.56□□□□□ -1.2
CHD2-221ENST00000635856 MNS1Q8NEH6 495 aa7.56□□□□□ -1.2
CHD2-221ENST00000635856 MFAP1P55081 439 aaKnown RBP7.55□□□□□ -1.2
CHD2-221ENST00000635856 ZBTB9Q96C00 473 aa7.55□□□□□ -1.2
CHD2-221ENST00000635856 CEP83Q9Y592 693 aa7.55□□□□□ -1.2
CHD2-221ENST00000635856 PSEN1P49768 467 aa7.55□□□□□ -1.2
CHD2-221ENST00000635856 SPRYD3Q8NCJ5 442 aa7.55□□□□□ -1.2
CHD2-221ENST00000635856 SLC26A8Q96RN1 970 aa7.55□□□□□ -1.2
CHD2-221ENST00000635856 RCAN3Q9UKA8 241 aa7.55□□□□□ -1.2
CHD2-221ENST00000635856 KTN1Q86UP2 1357 aaKnown RBP7.55□□□□□ -1.2
CHD2-221ENST00000635856 NINLQ9Y2I6 1382 aa7.55□□□□□ -1.2
CHD2-221ENST00000635856 DIAPH3Q9NSV4 1193 aa7.54□□□□□ -1.2
CHD2-221ENST00000635856 ZBTB7CA1YPR0 619 aa7.54□□□□□ -1.2
CHD2-221ENST00000635856 ERICH4A6NGS2 130 aa7.54□□□□□ -1.2
CHD2-221ENST00000635856 SATB1Q01826 763 aa7.54□□□□□ -1.2
CHD2-221ENST00000635856 PHLDB1Q86UU1 1377 aa7.54□□□□□ -1.2
CHD2-221ENST00000635856 SLC52A1Q9NWF4 448 aa7.54□□□□□ -1.2
CHD2-221ENST00000635856 NBPF20Q3BBV1 942 aa7.54□□□□□ -1.2
CHD2-221ENST00000635856 CENPQQ7L2Z9 268 aaPredicted RBP7.54□□□□□ -1.2
CHD2-221ENST00000635856 OGFRQ9NZT2 677 aa7.54□□□□□ -1.2
CHD2-221ENST00000635856 TRERF1Q96PN7 1200 aa7.54□□□□□ -1.2
CHD2-221ENST00000635856 ZNF500O60304 480 aaPredicted RBP7.53□□□□□ -1.2
CHD2-221ENST00000635856 CCDC88BA6NC98 1476 aa7.53□□□□□ -1.2
CHD2-221ENST00000635856 CCDC172P0C7W6 258 aa7.53□□□□□ -1.2
CHD2-221ENST00000635856 CARD10Q9BWT7 1032 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms