RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 WDR62O43379 1518 aa7.97□□□□□ -1.13
CDRT1-208ENST00000630868 TTLL13PA6NNM8 815 aa7.95□□□□□ -1.14
CDRT1-208ENST00000630868 OXER1Q8TDS5 423 aa7.95□□□□□ -1.14
CDRT1-208ENST00000630868 C2orf72A6NCS6 295 aa7.94□□□□□ -1.14
CDRT1-208ENST00000630868 MAP3K9P80192 1104 aa7.94□□□□□ -1.14
CDRT1-208ENST00000630868 SH3D19Q5HYK7 790 aa7.94□□□□□ -1.14
CDRT1-208ENST00000630868 PROSER2Q86WR7 435 aaPredicted RBP7.94□□□□□ -1.14
CDRT1-208ENST00000630868 DDX12PQ92771 950 aa7.94□□□□□ -1.14
CDRT1-208ENST00000630868 POM121Q96HA1 1249 aa7.94□□□□□ -1.14
CDRT1-208ENST00000630868 KIF3CO14782 793 aa7.93□□□□□ -1.14
CDRT1-208ENST00000630868 PTGDRQ13258 359 aa7.93□□□□□ -1.14
CDRT1-208ENST00000630868 PIP4P2Q8N4L2 257 aa7.93□□□□□ -1.14
CDRT1-208ENST00000630868 UPF1Q92900 1129 aaKnown RBP eCLIP7.93□□□□□ -1.14
CDRT1-208ENST00000630868 TIE1P35590 1138 aa7.92□□□□□ -1.14
CDRT1-208ENST00000630868 FNBP4Q8N3X1 1017 aaPredicted RBP7.92□□□□□ -1.14
CDRT1-208ENST00000630868 ZNF777Q9ULD5 760 aaPredicted RBP7.92□□□□□ -1.14
CDRT1-208ENST00000630868 PTGER2P43116 358 aa7.91□□□□□ -1.14
CDRT1-208ENST00000630868 PDCD7Q8N8D1 485 aaKnown RBP7.91□□□□□ -1.14
CDRT1-208ENST00000630868 TMUB1Q9BVT8 246 aa7.91□□□□□ -1.14
CDRT1-208ENST00000630868 BMP2KQ9NSY1 1161 aaPredicted RBP7.9□□□□□ -1.14
CDRT1-208ENST00000630868 TRIM35Q9UPQ4 493 aa7.89□□□□□ -1.15
CDRT1-208ENST00000630868 CEP164Q9UPV0 1460 aa7.88□□□□□ -1.15
CDRT1-208ENST00000630868 TRAIPQ9BWF2 469 aa7.88□□□□□ -1.15
CDRT1-208ENST00000630868 TMEM121BQ9BXQ6 578 aaPredicted RBP7.88□□□□□ -1.15
CDRT1-208ENST00000630868 CDHR5Q9HBB8 845 aa7.88□□□□□ -1.15
CDRT1-208ENST00000630868 KCTD17Q8N5Z5 321 aa7.87□□□□□ -1.15
CDRT1-208ENST00000630868 PHOX2BQ99453 314 aa7.87□□□□□ -1.15
CDRT1-208ENST00000630868 CFTRP13569 1480 aa7.87□□□□□ -1.15
CDRT1-208ENST00000630868 FANCD2Q9BXW9 1451 aa7.87□□□□□ -1.15
CDRT1-208ENST00000630868 MDM2Q00987 491 aaPredicted RBP7.86□□□□□ -1.15
CDRT1-208ENST00000630868 SKIV2LQ15477 1246 aaKnown RBP7.86□□□□□ -1.15
CDRT1-208ENST00000630868 PROCA1Q8NCQ7 364 aaPredicted RBP7.86□□□□□ -1.15
CDRT1-208ENST00000630868 CCDC97Q96F63 343 aaPredicted RBP7.86□□□□□ -1.15
CDRT1-208ENST00000630868 CLCN1P35523 988 aa7.85□□□□□ -1.15
CDRT1-208ENST00000630868 CHRDL2Q6WN34 429 aa7.85□□□□□ -1.15
CDRT1-208ENST00000630868 GPCPD1Q9NPB8 672 aa7.85□□□□□ -1.15
CDRT1-208ENST00000630868 SERPINA10Q9UK55 444 aa7.85□□□□□ -1.15
CDRT1-208ENST00000630868 WIZO95785 1651 aa7.84□□□□□ -1.15
CDRT1-208ENST00000630868 COG6Q9Y2V7 657 aa7.84□□□□□ -1.15
CDRT1-208ENST00000630868 EVI5O60447 810 aa7.83□□□□□ -1.16
CDRT1-208ENST00000630868 TMEM92Q6UXU6 159 aa7.83□□□□□ -1.16
CDRT1-208ENST00000630868 RETREG2Q8NC44 543 aa7.83□□□□□ -1.16
CDRT1-208ENST00000630868 PLSCR2Q9NRY7 297 aa7.83□□□□□ -1.16
CDRT1-208ENST00000630868 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
CDRT1-208ENST00000630868 URB2Q14146 1524 aaKnown RBP7.83□□□□□ -1.16
CDRT1-208ENST00000630868 RAD21O60216 631 aa7.82□□□□□ -1.16
CDRT1-208ENST00000630868 SSTR3P32745 418 aaPredicted RBP7.82□□□□□ -1.16
CDRT1-208ENST00000630868 BEGAINQ9BUH8 593 aa7.82□□□□□ -1.16
CDRT1-208ENST00000630868 NPDC1Q9NQX5 325 aaPredicted RBP7.82□□□□□ -1.16
CDRT1-208ENST00000630868 SPDYE5A6NIY4 337 aa7.81□□□□□ -1.16
CDRT1-208ENST00000630868 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDRT1-208ENST00000630868 POLR3EQ9NVU0 708 aa7.81□□□□□ -1.16
CDRT1-208ENST00000630868 AEBP1Q8IUX7 1158 aa7.8□□□□□ -1.16
CDRT1-208ENST00000630868 NLRP7Q8WX94 980 aa7.8□□□□□ -1.16
CDRT1-208ENST00000630868 FAM217BQ9NTX9 383 aaPredicted RBP7.8□□□□□ -1.16
CDRT1-208ENST00000630868 RIMBP3CA6NJZ7 1639 aa7.79□□□□□ -1.16
CDRT1-208ENST00000630868 RIMBP3BA6NNM3 1639 aa7.79□□□□□ -1.16
CDRT1-208ENST00000630868 RIMBP3Q9UFD9 1639 aa7.79□□□□□ -1.16
CDRT1-208ENST00000630868 IRX5P78411 483 aaPredicted RBP7.79□□□□□ -1.16
CDRT1-208ENST00000630868 EN1Q05925 392 aaPredicted RBP7.79□□□□□ -1.16
CDRT1-208ENST00000630868 MYSM1Q5VVJ2 828 aa7.79□□□□□ -1.16
CDRT1-208ENST00000630868 FBXO31Q5XUX0 539 aaPredicted RBP7.79□□□□□ -1.16
CDRT1-208ENST00000630868 SNRKQ9NRH2 765 aa7.79□□□□□ -1.16
CDRT1-208ENST00000630868 IRF5Q13568 498 aa7.78□□□□□ -1.16
CDRT1-208ENST00000630868 GALR2O43603 387 aaPredicted RBP7.77□□□□□ -1.17
CDRT1-208ENST00000630868 TBC1D12O60347 775 aa7.77□□□□□ -1.17
CDRT1-208ENST00000630868 FAM161AQ3B820 660 aa7.77□□□□□ -1.17
CDRT1-208ENST00000630868 ATP1B4Q9UN42 357 aaPredicted RBP7.77□□□□□ -1.17
CDRT1-208ENST00000630868 ARHGEF11O15085 1522 aa7.77□□□□□ -1.17
CDRT1-208ENST00000630868 C19orf67A6NJJ6 358 aa7.76□□□□□ -1.17
CDRT1-208ENST00000630868 RFC5P40937 340 aa7.76□□□□□ -1.17
CDRT1-208ENST00000630868 CLK2P49760 499 aaKnown RBP7.76□□□□□ -1.17
CDRT1-208ENST00000630868 TOP2AP11388 1531 aaKnown RBP7.76□□□□□ -1.17
CDRT1-208ENST00000630868 RSF1Q96T23 1441 aaPredicted RBP7.76□□□□□ -1.17
CDRT1-208ENST00000630868 IFT140Q96RY7 1462 aa7.75□□□□□ -1.17
CDRT1-208ENST00000630868 ZNF608Q9ULD9 1512 aaPredicted RBP7.75□□□□□ -1.17
CDRT1-208ENST00000630868 MAP3K7O43318 606 aa7.75□□□□□ -1.17
CDRT1-208ENST00000630868 ATN1P54259 1190 aaPredicted RBP7.75□□□□□ -1.17
CDRT1-208ENST00000630868 TSR1Q2NL82 804 aaKnown RBP7.75□□□□□ -1.17
CDRT1-208ENST00000630868 METTL3Q86U44 580 aaKnown RBP7.75□□□□□ -1.17
CDRT1-208ENST00000630868 RGS22Q8NE09 1264 aa7.75□□□□□ -1.17
CDRT1-208ENST00000630868 ZNF330Q9Y3S2 320 aaPredicted RBP7.75□□□□□ -1.17
CDRT1-208ENST00000630868 G3V3G9 751 aa7.74□□□□□ -1.17
CDRT1-208ENST00000630868 OCEL1Q9H607 264 aa7.74□□□□□ -1.17
CDRT1-208ENST00000630868 MTMR14Q8NCE2 650 aa7.73□□□□□ -1.17
CDRT1-208ENST00000630868 BANK1Q8NDB2 785 aa7.73□□□□□ -1.17
CDRT1-208ENST00000630868 RBM33Q96EV2 1170 aaKnown RBP7.73□□□□□ -1.17
CDRT1-208ENST00000630868 TMCO4Q5TGY1 634 aa7.72□□□□□ -1.17
CDRT1-208ENST00000630868 PTCD2Q8WV60 388 aaKnown RBP7.72□□□□□ -1.17
CDRT1-208ENST00000630868 TBC1D2Q9BYX2 928 aa7.72□□□□□ -1.17
CDRT1-208ENST00000630868 ANO8Q9HCE9 1232 aaPredicted RBP7.72□□□□□ -1.17
CDRT1-208ENST00000630868 LIMD1Q9UGP4 676 aa7.72□□□□□ -1.17
CDRT1-208ENST00000630868 MTMR7Q9Y216 660 aa7.72□□□□□ -1.17
CDRT1-208ENST00000630868 PRDM2Q13029 1718 aa7.72□□□□□ -1.17
CDRT1-208ENST00000630868 PHF14O94880 888 aa7.71□□□□□ -1.18
CDRT1-208ENST00000630868 GZF1Q9H116 711 aaPredicted RBP7.71□□□□□ -1.18
CDRT1-208ENST00000630868 GDPD2Q9HCC8 539 aa7.71□□□□□ -1.18
CDRT1-208ENST00000630868 TOPBP1Q92547 1522 aa7.71□□□□□ -1.18
CDRT1-208ENST00000630868 MFAP1P55081 439 aaKnown RBP7.7□□□□□ -1.18
CDRT1-208ENST00000630868 PXYLP1Q8TE99 480 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms