RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 ANKLE2Q86XL3 938 aa13.26□□□□□ -0.29
SRGAP2-217ENST00000624873 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
SRGAP2-217ENST00000624873 CHMP4BQ9H444 224 aaKnown RBP13.26□□□□□ -0.29
SRGAP2-217ENST00000624873 PSME1Q06323 249 aa13.26□□□□□ -0.29
SRGAP2-217ENST00000624873 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
SRGAP2-217ENST00000624873 ARHGEF11O15085 1522 aa13.25□□□□□ -0.29
SRGAP2-217ENST00000624873 MS4A1P11836 297 aa13.25□□□□□ -0.29
SRGAP2-217ENST00000624873 RTL5Q5HYW3 569 aaPredicted RBP13.25□□□□□ -0.29
SRGAP2-217ENST00000624873 SENP3-EIF4A1A0A087X0R7 540 aa13.25□□□□□ -0.29
SRGAP2-217ENST00000624873 ADGRL1O94910 1474 aa13.25□□□□□ -0.29
SRGAP2-217ENST00000624873 TIAM1Q13009 1591 aa13.25□□□□□ -0.29
SRGAP2-217ENST00000624873 PROSER2Q86WR7 435 aaPredicted RBP13.24□□□□□ -0.29
SRGAP2-217ENST00000624873 COG3Q96JB2 828 aa13.24□□□□□ -0.29
SRGAP2-217ENST00000624873 WDR62O43379 1518 aa13.24□□□□□ -0.29
SRGAP2-217ENST00000624873 SUPT6HQ7KZ85 1726 aaKnown RBP13.24□□□□□ -0.29
SRGAP2-217ENST00000624873 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
SRGAP2-217ENST00000624873 HFM1A2PYH4 1435 aa13.23□□□□□ -0.29
SRGAP2-217ENST00000624873 CENPJQ9HC77 1338 aaPredicted RBP13.23□□□□□ -0.29
SRGAP2-217ENST00000624873 EVA1CP58658 441 aa13.22□□□□□ -0.29
SRGAP2-217ENST00000624873 RRBP1Q9P2E9 1410 aaKnown RBP13.22□□□□□ -0.29
SRGAP2-217ENST00000624873 DENND4BO75064 1496 aaPredicted RBP13.22□□□□□ -0.29
SRGAP2-217ENST00000624873 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
SRGAP2-217ENST00000624873 CCDC141Q6ZP82 1450 aa13.21□□□□□ -0.29
SRGAP2-217ENST00000624873 CGNL1Q0VF96 1302 aa13.21□□□□□ -0.29
SRGAP2-217ENST00000624873 KIF14Q15058 1648 aa13.21□□□□□ -0.3
SRGAP2-217ENST00000624873 HSP90AA1P07900 732 aaKnown RBP13.2□□□□□ -0.3
SRGAP2-217ENST00000624873 DAPK1P53355 1430 aa13.19□□□□□ -0.3
SRGAP2-217ENST00000624873 CCER2I3L3R5 266 aa13.19□□□□□ -0.3
SRGAP2-217ENST00000624873 MEX3CQ5U5Q3 659 aaKnown RBP13.19□□□□□ -0.3
SRGAP2-217ENST00000624873 ANP32AP39687 249 aaKnown RBP13.19□□□□□ -0.3
SRGAP2-217ENST00000624873 TEX14Q8IWB6 1497 aa13.19□□□□□ -0.3
SRGAP2-217ENST00000624873 USP47Q96K76 1375 aa13.18□□□□□ -0.3
SRGAP2-217ENST00000624873 AKNAQ7Z591 1439 aa13.18□□□□□ -0.3
SRGAP2-217ENST00000624873 FRAT1Q92837 279 aaPredicted RBP13.18□□□□□ -0.3
SRGAP2-217ENST00000624873 PPP6R1Q9UPN7 881 aa13.18□□□□□ -0.3
SRGAP2-217ENST00000624873 FANCAO15360 1455 aa13.18□□□□□ -0.3
SRGAP2-217ENST00000624873 PANK3Q9H999 370 aa13.17□□□□□ -0.3
SRGAP2-217ENST00000624873 ASXL2Q76L83 1435 aa13.17□□□□□ -0.3
SRGAP2-217ENST00000624873 TMEM132EQ6IEE7 984 aa13.17□□□□□ -0.3
SRGAP2-217ENST00000624873 NLRP13Q86W25 1043 aa13.17□□□□□ -0.3
SRGAP2-217ENST00000624873 RPGRIP1LQ68CZ1 1315 aa13.16□□□□□ -0.3
SRGAP2-217ENST00000624873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRGAP2-217ENST00000624873 LMOD3Q0VAK6 560 aa13.16□□□□□ -0.3
SRGAP2-217ENST00000624873 EIF4G3O43432 1585 aaKnown RBP13.16□□□□□ -0.3
SRGAP2-217ENST00000624873 PCF11O94913 1555 aaKnown RBP13.16□□□□□ -0.3
SRGAP2-217ENST00000624873 CFAP70Q5T0N1 1121 aa13.15□□□□□ -0.3
SRGAP2-217ENST00000624873 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
SRGAP2-217ENST00000624873 KIAA1107Q9UPP5 1409 aa13.14□□□□□ -0.31
SRGAP2-217ENST00000624873 ROCK1Q13464 1354 aa13.14□□□□□ -0.31
SRGAP2-217ENST00000624873 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
SRGAP2-217ENST00000624873 OS9Q13438 667 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2-217ENST00000624873 GPRASP1Q5JY77 1395 aa13.13□□□□□ -0.31
SRGAP2-217ENST00000624873 SLC26A8Q96RN1 970 aa13.12□□□□□ -0.31
SRGAP2-217ENST00000624873 IRX6P78412 446 aaPredicted RBP13.12□□□□□ -0.31
SRGAP2-217ENST00000624873 CAMSAP2Q08AD1 1489 aa13.12□□□□□ -0.31
SRGAP2-217ENST00000624873 IPO8O15397 1037 aaKnown RBP13.11□□□□□ -0.31
SRGAP2-217ENST00000624873 ATP10BO94823 1461 aa13.11□□□□□ -0.31
SRGAP2-217ENST00000624873 MAP3K1Q13233 1512 aa13.11□□□□□ -0.31
SRGAP2-217ENST00000624873 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
SRGAP2-217ENST00000624873 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
SRGAP2-217ENST00000624873 ANKRD30BQ9BXX2 1392 aa13.11□□□□□ -0.31
SRGAP2-217ENST00000624873 ESCO1Q5FWF5 840 aa13.11□□□□□ -0.31
SRGAP2-217ENST00000624873 C1orf141Q5JVX7 400 aa13.1□□□□□ -0.31
SRGAP2-217ENST00000624873 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
SRGAP2-217ENST00000624873 NUP160Q12769 1436 aa13.1□□□□□ -0.31
SRGAP2-217ENST00000624873 WDR7Q9Y4E6 1490 aa13.09□□□□□ -0.31
SRGAP2-217ENST00000624873 UGGT2Q9NYU1 1516 aa13.09□□□□□ -0.31
SRGAP2-217ENST00000624873 EIF5BO60841 1220 aaKnown RBP13.09□□□□□ -0.31
SRGAP2-217ENST00000624873 RAPGEF6Q8TEU7 1601 aa13.08□□□□□ -0.32
SRGAP2-217ENST00000624873 NLRP6P59044 892 aa13.08□□□□□ -0.32
SRGAP2-217ENST00000624873 PRAM1Q96QH2 718 aa13.08□□□□□ -0.32
SRGAP2-217ENST00000624873 PLCH2O75038 1416 aa13.08□□□□□ -0.32
SRGAP2-217ENST00000624873 TMX4Q9H1E5 349 aaPredicted RBP13.08□□□□□ -0.32
SRGAP2-217ENST00000624873 CABP2Q9NPB3 220 aa13.07□□□□□ -0.32
SRGAP2-217ENST00000624873 HDAC5Q9UQL6 1122 aa13.07□□□□□ -0.32
SRGAP2-217ENST00000624873 CEBPAP49715 358 aaPredicted RBP13.06□□□□□ -0.32
SRGAP2-217ENST00000624873 CASC1Q6TDU7 716 aa13.06□□□□□ -0.32
SRGAP2-217ENST00000624873 ERBINQ96RT1 1412 aa13.06□□□□□ -0.32
SRGAP2-217ENST00000624873 DHX29Q7Z478 1369 aaKnown RBP13.06□□□□□ -0.32
SRGAP2-217ENST00000624873 SUPT16HQ9Y5B9 1047 aaKnown RBP13.06□□□□□ -0.32
SRGAP2-217ENST00000624873 MYBBP1AQ9BQG0 1328 aaKnown RBP13.06□□□□□ -0.32
SRGAP2-217ENST00000624873 TEFQ10587 303 aa13.05□□□□□ -0.32
SRGAP2-217ENST00000624873 ABCC5O15440 1437 aa13.05□□□□□ -0.32
SRGAP2-217ENST00000624873 WDR97A6NE52 1622 aa13.05□□□□□ -0.32
SRGAP2-217ENST00000624873 ABTB2Q8N961 1025 aa13.04□□□□□ -0.32
SRGAP2-217ENST00000624873 RAPGEF4Q8WZA2 1011 aa13.04□□□□□ -0.32
SRGAP2-217ENST00000624873 DIAPH1O60610 1272 aaKnown RBP13.04□□□□□ -0.32
SRGAP2-217ENST00000624873 ABCC2Q92887 1545 aa13.03□□□□□ -0.32
SRGAP2-217ENST00000624873 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
SRGAP2-217ENST00000624873 KIAA0556O60303 1618 aa13.03□□□□□ -0.32
SRGAP2-217ENST00000624873 NUP153P49790 1475 aaKnown RBP13.02□□□□□ -0.32
SRGAP2-217ENST00000624873 PTPN23Q9H3S7 1636 aa13.02□□□□□ -0.32
SRGAP2-217ENST00000624873 NLRP2Q9NX02 1062 aa13.02□□□□□ -0.32
SRGAP2-217ENST00000624873 THOC2Q8NI27 1593 aaKnown RBP13.02□□□□□ -0.32
SRGAP2-217ENST00000624873 FBXO31Q5XUX0 539 aaPredicted RBP13.02□□□□□ -0.33
SRGAP2-217ENST00000624873 GPATCH8Q9UKJ3 1502 aaKnown RBP13.02□□□□□ -0.33
SRGAP2-217ENST00000624873 NAIPQ13075 1403 aa13.02□□□□□ -0.33
SRGAP2-217ENST00000624873 GTF2E1P29083 439 aaPredicted RBP13.01□□□□□ -0.33
SRGAP2-217ENST00000624873 PMFBP1Q8TBY8 1022 aa13.01□□□□□ -0.33
SRGAP2-217ENST00000624873 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms