RNA–Protein interactions for RNA: ENST00000620759.1

CDKN3-212, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-212ENST00000620759 AMER1Q5JTC6 1135 aaPredicted RBP9.56□□□□□ -0.88
CDKN3-212ENST00000620759 EPAS1Q99814 870 aa9.56□□□□□ -0.88
CDKN3-212ENST00000620759 SPRYD3Q8NCJ5 442 aa9.55□□□□□ -0.88
CDKN3-212ENST00000620759 RABGEF1Q9UJ41 708 aa9.55□□□□□ -0.88
CDKN3-212ENST00000620759 COL9A1P20849 921 aa9.51□□□□□ -0.89
CDKN3-212ENST00000620759 ANKK1Q8NFD2 765 aa9.51□□□□□ -0.89
CDKN3-212ENST00000620759 PROX2Q3B8N5 592 aa9.5□□□□□ -0.89
CDKN3-212ENST00000620759 LAPTM4BQ86VI4 370 aa9.5□□□□□ -0.89
CDKN3-212ENST00000620759 ONECUT3O60422 494 aaPredicted RBP9.49□□□□□ -0.89
CDKN3-212ENST00000620759 C6orf132Q5T0Z8 1188 aa9.49□□□□□ -0.89
CDKN3-212ENST00000620759 IFFO2Q5TF58 517 aa9.47□□□□□ -0.89
CDKN3-212ENST00000620759 DDX12PQ92771 950 aa9.47□□□□□ -0.89
CDKN3-212ENST00000620759 SPDYE16A6NNV3 312 aaPredicted RBP9.46□□□□□ -0.9
CDKN3-212ENST00000620759 PDIA6Q15084 440 aa9.46□□□□□ -0.9
CDKN3-212ENST00000620759 RBM33Q96EV2 1170 aaKnown RBP9.46□□□□□ -0.9
CDKN3-212ENST00000620759 KIAA1468Q9P260 1216 aa9.46□□□□□ -0.9
CDKN3-212ENST00000620759 WDR70Q9NW82 654 aa9.45□□□□□ -0.9
CDKN3-212ENST00000620759 TRIM6-TRIM34B2RNG4 842 aa9.44□□□□□ -0.9
CDKN3-212ENST00000620759 NBR1Q14596 966 aa9.44□□□□□ -0.9
CDKN3-212ENST00000620759 RGS20O76081 388 aa9.43□□□□□ -0.9
CDKN3-212ENST00000620759 E2F4Q16254 413 aa9.43□□□□□ -0.9
CDKN3-212ENST00000620759 NYAP1Q6ZVC0 841 aa9.43□□□□□ -0.9
CDKN3-212ENST00000620759 CFAP44Q96MT7 982 aa9.43□□□□□ -0.9
CDKN3-212ENST00000620759 SOWAHBA6NEL2 793 aa9.42□□□□□ -0.9
CDKN3-212ENST00000620759 MAP3K7O43318 606 aa9.42□□□□□ -0.9
CDKN3-212ENST00000620759 EN1Q05925 392 aaPredicted RBP9.42□□□□□ -0.9
CDKN3-212ENST00000620759 PAXIP1Q6ZW49 1069 aaPredicted RBP9.42□□□□□ -0.9
CDKN3-212ENST00000620759 ZFRQ96KR1 1074 aaKnown RBP9.42□□□□□ -0.9
CDKN3-212ENST00000620759 FAM98CQ17RN3 349 aaKnown RBP9.41□□□□□ -0.9
CDKN3-212ENST00000620759 RTN4Q9NQC3 1192 aaKnown RBP9.41□□□□□ -0.9
CDKN3-212ENST00000620759 BCAMP50895 628 aa9.4□□□□□ -0.9
CDKN3-212ENST00000620759 SEPT9Q9UHD8 586 aaPredicted RBP9.4□□□□□ -0.9
CDKN3-212ENST00000620759 A0A0G2JS52 829 aa9.39□□□□□ -0.91
CDKN3-212ENST00000620759 PACS2Q86VP3 889 aa9.39□□□□□ -0.91
CDKN3-212ENST00000620759 ARIH1Q9Y4X5 557 aaPredicted RBP9.39□□□□□ -0.91
CDKN3-212ENST00000620759 CERKQ8TCT0 537 aa9.38□□□□□ -0.91
CDKN3-212ENST00000620759 TSR1Q2NL82 804 aaKnown RBP9.37□□□□□ -0.91
CDKN3-212ENST00000620759 LRCH3Q96II8 777 aa9.37□□□□□ -0.91
CDKN3-212ENST00000620759 ITGBL1O95965 494 aaPredicted RBP9.36□□□□□ -0.91
CDKN3-212ENST00000620759 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.36□□□□□ -0.91
CDKN3-212ENST00000620759 TSR3Q9UJK0 312 aaKnown RBP9.35□□□□□ -0.91
CDKN3-212ENST00000620759 GRXCR2A6NFK2 248 aa9.34□□□□□ -0.91
CDKN3-212ENST00000620759 WBP1LQ9NX94 342 aa9.34□□□□□ -0.91
CDKN3-212ENST00000620759 TSKSQ9UJT2 592 aa9.33□□□□□ -0.92
CDKN3-212ENST00000620759 PRSS12P56730 875 aa9.32□□□□□ -0.92
CDKN3-212ENST00000620759 CDCA7LQ96GN5 454 aa9.32□□□□□ -0.92
CDKN3-212ENST00000620759 HPS5Q9UPZ3 1129 aa9.32□□□□□ -0.92
CDKN3-212ENST00000620759 NBPF26B4DH59 902 aa9.3□□□□□ -0.92
CDKN3-212ENST00000620759 KCNC4Q03721 635 aa9.3□□□□□ -0.92
CDKN3-212ENST00000620759 PPP4CP60510 307 aa9.28□□□□□ -0.92
CDKN3-212ENST00000620759 IRX2Q9BZI1 471 aaPredicted RBP9.28□□□□□ -0.92
CDKN3-212ENST00000620759 RBM27Q9P2N5 1060 aaKnown RBP9.27□□□□□ -0.93
CDKN3-212ENST00000620759 OSBPP22059 807 aa9.26□□□□□ -0.93
CDKN3-212ENST00000620759 HDGFP51858 240 aaKnown RBP9.26□□□□□ -0.93
CDKN3-212ENST00000620759 PNMA3Q9UL41 463 aa9.26□□□□□ -0.93
CDKN3-212ENST00000620759 PRIM1P49642 420 aaKnown RBP9.25□□□□□ -0.93
CDKN3-212ENST00000620759 TATDN2Q93075 761 aa9.25□□□□□ -0.93
CDKN3-212ENST00000620759 SMAPO00193 183 aa9.24□□□□□ -0.93
CDKN3-212ENST00000620759 SAMD7Q7Z3H4 446 aa9.24□□□□□ -0.93
CDKN3-212ENST00000620759 CDHR5Q9HBB8 845 aa9.23□□□□□ -0.93
CDKN3-212ENST00000620759 FAM198AQ9UFP1 575 aa9.22□□□□□ -0.93
CDKN3-212ENST00000620759 NUDT18Q6ZVK8 323 aa9.21□□□□□ -0.94
CDKN3-212ENST00000620759 NECTIN2Q92692 538 aa9.21□□□□□ -0.94
CDKN3-212ENST00000620759 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
CDKN3-212ENST00000620759 RNF40O75150 1001 aa9.19□□□□□ -0.94
CDKN3-212ENST00000620759 SLC4A3P48751 1232 aa9.19□□□□□ -0.94
CDKN3-212ENST00000620759 PADI6Q6TGC4 694 aa9.16□□□□□ -0.94
CDKN3-212ENST00000620759 SLF2Q8IX21 1173 aa9.16□□□□□ -0.94
CDKN3-212ENST00000620759 TTC13Q8NBP0 860 aa9.16□□□□□ -0.94
CDKN3-212ENST00000620759 IL21Q9HBE4 155 aa9.16□□□□□ -0.94
CDKN3-212ENST00000620759 TSHZ2Q9NRE2 1034 aa9.16□□□□□ -0.94
CDKN3-212ENST00000620759 C3orf80F5H4A9 247 aa9.15□□□□□ -0.94
CDKN3-212ENST00000620759 TJAP1Q5JTD0 557 aa9.14□□□□□ -0.95
CDKN3-212ENST00000620759 MTRQ99707 1265 aa9.14□□□□□ -0.95
CDKN3-212ENST00000620759 NPDC1Q9NQX5 325 aaPredicted RBP9.14□□□□□ -0.95
CDKN3-212ENST00000620759 P3H3Q8IVL6 736 aa9.12□□□□□ -0.95
CDKN3-212ENST00000620759 KCNV2Q8TDN2 545 aa9.12□□□□□ -0.95
CDKN3-212ENST00000620759 MLLT3P42568 568 aaPredicted RBP9.11□□□□□ -0.95
CDKN3-212ENST00000620759 LAPTM4AQ15012 233 aa9.11□□□□□ -0.95
CDKN3-212ENST00000620759 SWT1Q5T5J6 900 aaKnown RBP9.11□□□□□ -0.95
CDKN3-212ENST00000620759 PRR14Q9BWN1 585 aa9.11□□□□□ -0.95
CDKN3-212ENST00000620759 APLP1P51693 650 aa9.1□□□□□ -0.95
CDKN3-212ENST00000620759 Q6ZNB5 142 aa9.09□□□□□ -0.95
CDKN3-212ENST00000620759 EYA1Q99502 592 aa9.08□□□□□ -0.96
CDKN3-212ENST00000620759 GGCXP38435 758 aa9.07□□□□□ -0.96
CDKN3-212ENST00000620759 PTGDRQ13258 359 aa9.07□□□□□ -0.96
CDKN3-212ENST00000620759 RBM46Q8TBY0 533 aaKnown RBP9.07□□□□□ -0.96
CDKN3-212ENST00000620759 DNAJB2P25686 324 aa9.06□□□□□ -0.96
CDKN3-212ENST00000620759 PPP1R18Q6NYC8 613 aa9.06□□□□□ -0.96
CDKN3-212ENST00000620759 NUTM2FA1L443 756 aa9.05□□□□□ -0.96
CDKN3-212ENST00000620759 ZNF516Q92618 1163 aa9.05□□□□□ -0.96
CDKN3-212ENST00000620759 PRKD2Q9BZL6 878 aa9.05□□□□□ -0.96
CDKN3-212ENST00000620759 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.05□□□□□ -0.96
CDKN3-212ENST00000620759 COPS2P61201 443 aa9.04□□□□□ -0.96
CDKN3-212ENST00000620759 V9GY48 417 aaPredicted RBP9.04□□□□□ -0.96
CDKN3-212ENST00000620759 PCDHB3Q9Y5E6 796 aa9.02□□□□□ -0.97
CDKN3-212ENST00000620759 ADGRG1Q9Y653 693 aa9.02□□□□□ -0.97
CDKN3-212ENST00000620759 GFRA3O60609 400 aa9.01□□□□□ -0.97
CDKN3-212ENST00000620759 ZPR1O75312 459 aa9.01□□□□□ -0.97
CDKN3-212ENST00000620759 FCHSD2O94868 740 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms