RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 MAP2K5Q13163 448 aa7.81□□□□□ -1.16
MALAT1-216ENST00000620465 C6orf132Q5T0Z8 1188 aa7.81□□□□□ -1.16
MALAT1-216ENST00000620465 CERKQ8TCT0 537 aa7.81□□□□□ -1.16
MALAT1-216ENST00000620465 ST18O60284 1047 aa7.8□□□□□ -1.16
MALAT1-216ENST00000620465 BCL2L12Q9HB09 334 aa7.8□□□□□ -1.16
MALAT1-216ENST00000620465 NPDC1Q9NQX5 325 aaPredicted RBP7.8□□□□□ -1.16
MALAT1-216ENST00000620465 EMP3P54852 163 aa7.79□□□□□ -1.16
MALAT1-216ENST00000620465 AK7Q96M32 723 aa7.79□□□□□ -1.16
MALAT1-216ENST00000620465 MINK1Q8N4C8 1332 aaPredicted RBP7.78□□□□□ -1.16
MALAT1-216ENST00000620465 PTPREP23469 700 aa7.78□□□□□ -1.16
MALAT1-216ENST00000620465 ERBB3P21860 1342 aa7.78□□□□□ -1.16
MALAT1-216ENST00000620465 RBM27Q9P2N5 1060 aaKnown RBP7.77□□□□□ -1.17
MALAT1-216ENST00000620465 FECHP22830 423 aa7.76□□□□□ -1.17
MALAT1-216ENST00000620465 VARS2Q5ST30 1063 aaKnown RBP7.76□□□□□ -1.17
MALAT1-216ENST00000620465 CCDC102AQ96A19 550 aa7.76□□□□□ -1.17
MALAT1-216ENST00000620465 MARVELD3Q96A59 401 aa7.76□□□□□ -1.17
MALAT1-216ENST00000620465 FAM163AQ96GL9 167 aaPredicted RBP7.76□□□□□ -1.17
MALAT1-216ENST00000620465 KCNH8Q96L42 1107 aa7.76□□□□□ -1.17
MALAT1-216ENST00000620465 PPP1R3GB7ZBB8 358 aa7.75□□□□□ -1.17
MALAT1-216ENST00000620465 IRF6O14896 467 aa7.75□□□□□ -1.17
MALAT1-216ENST00000620465 PADI6Q6TGC4 694 aa7.74□□□□□ -1.17
MALAT1-216ENST00000620465 KCNK17Q96T54 332 aa7.74□□□□□ -1.17
MALAT1-216ENST00000620465 TRIM66O15016 1216 aa7.73□□□□□ -1.17
MALAT1-216ENST00000620465 COL9A1P20849 921 aa7.73□□□□□ -1.17
MALAT1-216ENST00000620465 BRPF1P55201 1214 aaPredicted RBP7.73□□□□□ -1.17
MALAT1-216ENST00000620465 NEUROD2Q15784 382 aa7.73□□□□□ -1.17
MALAT1-216ENST00000620465 FAM205CA6NFA0 338 aa7.72□□□□□ -1.17
MALAT1-216ENST00000620465 PRSS12P56730 875 aa7.72□□□□□ -1.17
MALAT1-216ENST00000620465 CDCA7LQ96GN5 454 aa7.72□□□□□ -1.17
MALAT1-216ENST00000620465 PBX2P40425 430 aa7.71□□□□□ -1.18
MALAT1-216ENST00000620465 TTC13Q8NBP0 860 aa7.71□□□□□ -1.18
MALAT1-216ENST00000620465 PDE4DQ08499 809 aa7.7□□□□□ -1.18
MALAT1-216ENST00000620465 AMHR2Q16671 573 aa7.7□□□□□ -1.18
MALAT1-216ENST00000620465 ARHGAP33O14559 1287 aa7.69□□□□□ -1.18
MALAT1-216ENST00000620465 OATP04181 439 aa7.69□□□□□ -1.18
MALAT1-216ENST00000620465 LCE2DQ5TA82 110 aaPredicted RBP7.69□□□□□ -1.18
MALAT1-216ENST00000620465 HS3ST6Q96QI5 342 aa7.69□□□□□ -1.18
MALAT1-216ENST00000620465 ADGRG1Q9Y653 693 aa7.69□□□□□ -1.18
MALAT1-216ENST00000620465 TRIM6-TRIM34B2RNG4 842 aa7.68□□□□□ -1.18
MALAT1-216ENST00000620465 PSEN2P49810 448 aa7.68□□□□□ -1.18
MALAT1-216ENST00000620465 ZNF687Q8N1G0 1237 aa7.68□□□□□ -1.18
MALAT1-216ENST00000620465 NBPF26B4DH59 902 aa7.67□□□□□ -1.18
MALAT1-216ENST00000620465 TTLL12Q14166 644 aaPredicted RBP7.67□□□□□ -1.18
MALAT1-216ENST00000620465 METTL3Q86U44 580 aaKnown RBP7.67□□□□□ -1.18
MALAT1-216ENST00000620465 TSKSQ9UJT2 592 aa7.67□□□□□ -1.18
MALAT1-216ENST00000620465 FAM161AQ3B820 660 aa7.66□□□□□ -1.18
MALAT1-216ENST00000620465 POTEEQ6S8J3 1075 aa7.66□□□□□ -1.18
MALAT1-216ENST00000620465 RBM46Q8TBY0 533 aaKnown RBP7.66□□□□□ -1.18
MALAT1-216ENST00000620465 ZBED2Q9BTP6 218 aa7.66□□□□□ -1.18
MALAT1-216ENST00000620465 GPBP1L1Q9HC44 474 aaPredicted RBP7.66□□□□□ -1.18
MALAT1-216ENST00000620465 FAM198AQ9UFP1 575 aa7.66□□□□□ -1.18
MALAT1-216ENST00000620465 ONECUT3O60422 494 aaPredicted RBP7.65□□□□□ -1.18
MALAT1-216ENST00000620465 PROX2Q3B8N5 592 aa7.65□□□□□ -1.18
MALAT1-216ENST00000620465 PACS2Q86VP3 889 aa7.65□□□□□ -1.18
MALAT1-216ENST00000620465 PARP9Q8IXQ6 854 aa7.65□□□□□ -1.18
MALAT1-216ENST00000620465 PXYLP1Q8TE99 480 aa7.65□□□□□ -1.18
MALAT1-216ENST00000620465 KDM4CQ9H3R0 1056 aa7.65□□□□□ -1.18
MALAT1-216ENST00000620465 AXIN2Q9Y2T1 843 aa7.65□□□□□ -1.18
MALAT1-216ENST00000620465 POTEB3A0JP26 581 aa7.64□□□□□ -1.19
MALAT1-216ENST00000620465 POTEBQ6S5H4 581 aa7.64□□□□□ -1.19
MALAT1-216ENST00000620465 SLC4A5Q9BY07 1137 aa7.64□□□□□ -1.19
MALAT1-216ENST00000620465 CLCN1P35523 988 aa7.63□□□□□ -1.19
MALAT1-216ENST00000620465 DMRTA1Q5VZB9 504 aa7.63□□□□□ -1.19
MALAT1-216ENST00000620465 PHOX2BQ99453 314 aa7.63□□□□□ -1.19
MALAT1-216ENST00000620465 MDM2Q00987 491 aaPredicted RBP7.62□□□□□ -1.19
MALAT1-216ENST00000620465 NUDT18Q6ZVK8 323 aa7.62□□□□□ -1.19
MALAT1-216ENST00000620465 TATDN2Q93075 761 aa7.62□□□□□ -1.19
MALAT1-216ENST00000620465 EYA1Q99502 592 aa7.62□□□□□ -1.19
MALAT1-216ENST00000620465 GPCPD1Q9NPB8 672 aa7.62□□□□□ -1.19
MALAT1-216ENST00000620465 RABGEF1Q9UJ41 708 aa7.62□□□□□ -1.19
MALAT1-216ENST00000620465 PNMA3Q9UL41 463 aa7.62□□□□□ -1.19
MALAT1-216ENST00000620465 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.61□□□□□ -1.19
MALAT1-216ENST00000620465 GIGYF2Q6Y7W6 1299 aaKnown RBP7.61□□□□□ -1.19
MALAT1-216ENST00000620465 KIAA1468Q9P260 1216 aa7.61□□□□□ -1.19
MALAT1-216ENST00000620465 C3orf80F5H4A9 247 aa7.6□□□□□ -1.19
MALAT1-216ENST00000620465 TMEM132AQ24JP5 1023 aa7.6□□□□□ -1.19
MALAT1-216ENST00000620465 NLRP7Q8WX94 980 aa7.6□□□□□ -1.19
MALAT1-216ENST00000620465 DAXXQ9UER7 740 aaPredicted RBP7.6□□□□□ -1.19
MALAT1-216ENST00000620465 VPS9D1Q9Y2B5 631 aa7.6□□□□□ -1.19
MALAT1-216ENST00000620465 RCCD1A6NED2 376 aa7.59□□□□□ -1.19
MALAT1-216ENST00000620465 TK2O00142 265 aa7.59□□□□□ -1.19
MALAT1-216ENST00000620465 DNAJB2P25686 324 aa7.59□□□□□ -1.19
MALAT1-216ENST00000620465 LSM11P83369 360 aaKnown RBP eCLIP7.59□□□□□ -1.19
MALAT1-216ENST00000620465 TMUB1Q9BVT8 246 aa7.59□□□□□ -1.19
MALAT1-216ENST00000620465 SMAPO00193 183 aa7.58□□□□□ -1.2
MALAT1-216ENST00000620465 REPIN1Q9BWE0 567 aaKnown RBP7.58□□□□□ -1.2
MALAT1-216ENST00000620465 NBPF3Q9H094 633 aa7.58□□□□□ -1.2
MALAT1-216ENST00000620465 DDRGK1Q96HY6 314 aa7.57□□□□□ -1.2
MALAT1-216ENST00000620465 TMEM134Q9H6X4 195 aa7.57□□□□□ -1.2
MALAT1-216ENST00000620465 SEPT9Q9UHD8 586 aaPredicted RBP7.57□□□□□ -1.2
MALAT1-216ENST00000620465 ADGRD1Q6QNK2 874 aa7.56□□□□□ -1.2
MALAT1-216ENST00000620465 MS4A1P11836 297 aa7.55□□□□□ -1.2
MALAT1-216ENST00000620465 FAM98CQ17RN3 349 aaKnown RBP7.55□□□□□ -1.2
MALAT1-216ENST00000620465 LAPTM4BQ86VI4 370 aa7.55□□□□□ -1.2
MALAT1-216ENST00000620465 FAM117AQ9C073 453 aa7.55□□□□□ -1.2
MALAT1-216ENST00000620465 FAM217BQ9NTX9 383 aaPredicted RBP7.55□□□□□ -1.2
MALAT1-216ENST00000620465 SULF1Q8IWU6 871 aa7.54□□□□□ -1.2
MALAT1-216ENST00000620465 IL27Q8NEV9 243 aa7.54□□□□□ -1.2
MALAT1-216ENST00000620465 SSTR3P32745 418 aaPredicted RBP7.53□□□□□ -1.2
MALAT1-216ENST00000620465 PLEKHG3A1L390 1219 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms