RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 MRPL50Q8N5N7 158 aaKnown RBP5.54□□□□□ -1.52
SMC5-204ENST00000618375 FBXW7Q969H0 707 aa5.54□□□□□ -1.52
SMC5-204ENST00000618375 PHF14O94880 888 aa5.53□□□□□ -1.52
SMC5-204ENST00000618375 CENPBP07199 599 aaPredicted RBP5.53□□□□□ -1.52
SMC5-204ENST00000618375 PTPN5P54829 565 aa5.53□□□□□ -1.52
SMC5-204ENST00000618375 DDX12PQ92771 950 aa5.53□□□□□ -1.52
SMC5-204ENST00000618375 NBPF3Q9H094 633 aa5.53□□□□□ -1.52
SMC5-204ENST00000618375 PCDHGA10Q9Y5H3 936 aa5.53□□□□□ -1.52
SMC5-204ENST00000618375 FAM9AQ8IZU1 332 aaPredicted RBP5.52□□□□□ -1.53
SMC5-204ENST00000618375 RBM33Q96EV2 1170 aaKnown RBP5.52□□□□□ -1.53
SMC5-204ENST00000618375 PPP1R3GB7ZBB8 358 aa5.51□□□□□ -1.53
SMC5-204ENST00000618375 CAMK2BQ13554 666 aa5.51□□□□□ -1.53
SMC5-204ENST00000618375 E2F4Q16254 413 aa5.51□□□□□ -1.53
SMC5-204ENST00000618375 EPAS1Q99814 870 aa5.51□□□□□ -1.53
SMC5-204ENST00000618375 ZBED2Q9BTP6 218 aa5.51□□□□□ -1.53
SMC5-204ENST00000618375 SLC4A5Q9BY07 1137 aa5.51□□□□□ -1.53
SMC5-204ENST00000618375 PLA2G2EQ9NZK7 142 aa5.51□□□□□ -1.53
SMC5-204ENST00000618375 NBR1Q14596 966 aa5.5□□□□□ -1.53
SMC5-204ENST00000618375 WNT2BQ93097 391 aa5.5□□□□□ -1.53
SMC5-204ENST00000618375 MAP3K7O43318 606 aa5.49□□□□□ -1.53
SMC5-204ENST00000618375 PROX2Q3B8N5 592 aa5.49□□□□□ -1.53
SMC5-204ENST00000618375 GRXCR2A6NFK2 248 aa5.48□□□□□ -1.53
SMC5-204ENST00000618375 C6orf132Q5T0Z8 1188 aa5.48□□□□□ -1.53
SMC5-204ENST00000618375 SPDYE16A6NNV3 312 aaPredicted RBP5.47□□□□□ -1.53
SMC5-204ENST00000618375 BHMG1C9JSJ3 638 aaPredicted RBP5.47□□□□□ -1.53
SMC5-204ENST00000618375 COL9A1P20849 921 aa5.47□□□□□ -1.53
SMC5-204ENST00000618375 ANKK1Q8NFD2 765 aa5.47□□□□□ -1.53
SMC5-204ENST00000618375 RABGEF1Q9UJ41 708 aa5.47□□□□□ -1.53
SMC5-204ENST00000618375 PDIA6Q15084 440 aa5.46□□□□□ -1.54
SMC5-204ENST00000618375 THSD4Q6ZMP0 1018 aa5.46□□□□□ -1.54
SMC5-204ENST00000618375 KIAA1468Q9P260 1216 aa5.46□□□□□ -1.54
SMC5-204ENST00000618375 PACS2Q86VP3 889 aa5.44□□□□□ -1.54
SMC5-204ENST00000618375 SEPT9Q9UHD8 586 aaPredicted RBP5.44□□□□□ -1.54
SMC5-204ENST00000618375 TRIM6-TRIM34B2RNG4 842 aa5.43□□□□□ -1.54
SMC5-204ENST00000618375 EN1Q05925 392 aaPredicted RBP5.43□□□□□ -1.54
SMC5-204ENST00000618375 TSR1Q2NL82 804 aaKnown RBP5.43□□□□□ -1.54
SMC5-204ENST00000618375 LAPTM4BQ86VI4 370 aa5.43□□□□□ -1.54
SMC5-204ENST00000618375 BCAMP50895 628 aa5.42□□□□□ -1.54
SMC5-204ENST00000618375 ZFRQ96KR1 1074 aaKnown RBP5.42□□□□□ -1.54
SMC5-204ENST00000618375 ACIN1Q9UKV3 1341 aaKnown RBP5.42□□□□□ -1.54
SMC5-204ENST00000618375 ONECUT3O60422 494 aaPredicted RBP5.41□□□□□ -1.54
SMC5-204ENST00000618375 TSHZ2Q9NRE2 1034 aa5.41□□□□□ -1.54
SMC5-204ENST00000618375 ZEB1P37275 1124 aaPredicted RBP5.4□□□□□ -1.54
SMC5-204ENST00000618375 FAM98CQ17RN3 349 aaKnown RBP5.4□□□□□ -1.54
SMC5-204ENST00000618375 CERKQ8TCT0 537 aa5.4□□□□□ -1.54
SMC5-204ENST00000618375 LRCH3Q96II8 777 aa5.4□□□□□ -1.54
SMC5-204ENST00000618375 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.4□□□□□ -1.54
SMC5-204ENST00000618375 CCDC180Q9P1Z9 1646 aa5.4□□□□□ -1.55
SMC5-204ENST00000618375 SOWAHBA6NEL2 793 aa5.39□□□□□ -1.55
SMC5-204ENST00000618375 HDGFP51858 240 aaKnown RBP5.39□□□□□ -1.55
SMC5-204ENST00000618375 CDCA7LQ96GN5 454 aa5.39□□□□□ -1.55
SMC5-204ENST00000618375 EIF5BO60841 1220 aaKnown RBP5.38□□□□□ -1.55
SMC5-204ENST00000618375 RNF40O75150 1001 aa5.38□□□□□ -1.55
SMC5-204ENST00000618375 PRSS12P56730 875 aa5.38□□□□□ -1.55
SMC5-204ENST00000618375 PPARGC1BQ86YN6 1023 aaKnown RBP5.38□□□□□ -1.55
SMC5-204ENST00000618375 ANP32EQ9BTT0 268 aa5.38□□□□□ -1.55
SMC5-204ENST00000618375 TSKSQ9UJT2 592 aa5.38□□□□□ -1.55
SMC5-204ENST00000618375 ARIH1Q9Y4X5 557 aaPredicted RBP5.38□□□□□ -1.55
SMC5-204ENST00000618375 NBPF26B4DH59 902 aa5.37□□□□□ -1.55
SMC5-204ENST00000618375 SMAPO00193 183 aa5.37□□□□□ -1.55
SMC5-204ENST00000618375 WBP1LQ9NX94 342 aa5.37□□□□□ -1.55
SMC5-204ENST00000618375 PNMA3Q9UL41 463 aa5.37□□□□□ -1.55
SMC5-204ENST00000618375 HPS5Q9UPZ3 1129 aa5.37□□□□□ -1.55
SMC5-204ENST00000618375 OSBPP22059 807 aa5.36□□□□□ -1.55
SMC5-204ENST00000618375 PPP4CP60510 307 aa5.36□□□□□ -1.55
SMC5-204ENST00000618375 NYAP1Q6ZVC0 841 aa5.36□□□□□ -1.55
SMC5-204ENST00000618375 P3H3Q8IVL6 736 aa5.36□□□□□ -1.55
SMC5-204ENST00000618375 ARHGEF1Q92888 912 aaKnown RBP5.36□□□□□ -1.55
SMC5-204ENST00000618375 CDHR5Q9HBB8 845 aa5.36□□□□□ -1.55
SMC5-204ENST00000618375 TSR3Q9UJK0 312 aaKnown RBP5.36□□□□□ -1.55
SMC5-204ENST00000618375 DCAF1Q9Y4B6 1507 aa5.35□□□□□ -1.55
SMC5-204ENST00000618375 KCNV2Q8TDN2 545 aa5.35□□□□□ -1.55
SMC5-204ENST00000618375 TATDN2Q93075 761 aa5.35□□□□□ -1.55
SMC5-204ENST00000618375 SLC4A3P48751 1232 aa5.34□□□□□ -1.55
SMC5-204ENST00000618375 PRIM1P49642 420 aaKnown RBP5.34□□□□□ -1.55
SMC5-204ENST00000618375 NUDT18Q6ZVK8 323 aa5.34□□□□□ -1.55
SMC5-204ENST00000618375 SAMD7Q7Z3H4 446 aa5.34□□□□□ -1.55
SMC5-204ENST00000618375 KCNC4Q03721 635 aa5.33□□□□□ -1.56
SMC5-204ENST00000618375 NUTM2FA1L443 756 aa5.32□□□□□ -1.56
SMC5-204ENST00000618375 MLLT3P42568 568 aaPredicted RBP5.32□□□□□ -1.56
SMC5-204ENST00000618375 IFFO2Q5TF58 517 aa5.32□□□□□ -1.56
SMC5-204ENST00000618375 PADI6Q6TGC4 694 aa5.32□□□□□ -1.56
SMC5-204ENST00000618375 UBE2Q2Q8WVN8 375 aa5.32□□□□□ -1.56
SMC5-204ENST00000618375 A0A0G2JS52 829 aa5.31□□□□□ -1.56
SMC5-204ENST00000618375 HAP1P54257 671 aaPredicted RBP5.31□□□□□ -1.56
SMC5-204ENST00000618375 PLCB2Q00722 1185 aa5.31□□□□□ -1.56
SMC5-204ENST00000618375 RBM27Q9P2N5 1060 aaKnown RBP5.31□□□□□ -1.56
SMC5-204ENST00000618375 FAM198AQ9UFP1 575 aa5.31□□□□□ -1.56
SMC5-204ENST00000618375 NECTIN2Q92692 538 aa5.3□□□□□ -1.56
SMC5-204ENST00000618375 CLSPNQ9HAW4 1339 aa5.29□□□□□ -1.56
SMC5-204ENST00000618375 ITGBL1O95965 494 aaPredicted RBP5.29□□□□□ -1.56
SMC5-204ENST00000618375 GTF3C3Q9Y5Q9 886 aa5.29□□□□□ -1.56
SMC5-204ENST00000618375 MYO15BQ96JP2 1530 aa5.28□□□□□ -1.56
SMC5-204ENST00000618375 C3orf80F5H4A9 247 aa5.28□□□□□ -1.56
SMC5-204ENST00000618375 SEMA3EO15041 775 aa5.28□□□□□ -1.56
SMC5-204ENST00000618375 RGS20O76081 388 aa5.28□□□□□ -1.56
SMC5-204ENST00000618375 NEUROD1Q13562 356 aa5.28□□□□□ -1.56
SMC5-204ENST00000618375 SWT1Q5T5J6 900 aaKnown RBP5.28□□□□□ -1.56
SMC5-204ENST00000618375 SLF2Q8IX21 1173 aa5.28□□□□□ -1.56
SMC5-204ENST00000618375 IRX2Q9BZI1 471 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms