RNA–Protein interactions for RNA: ENST00000616760.1

CLIC1-210, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIC1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-210ENST00000616760 CDK13Q14004 1512 aaKnown RBP15.77■□□□□ 0.11
CLIC1-210ENST00000616760 ARHGAP35Q9NRY4 1499 aa15.76■□□□□ 0.11
CLIC1-210ENST00000616760 PCDHB13Q9Y5F0 798 aa15.75■□□□□ 0.11
CLIC1-210ENST00000616760 SIGLEC1Q9BZZ2 1709 aa15.74■□□□□ 0.11
CLIC1-210ENST00000616760 DCBLD2Q96PD2 775 aa15.74■□□□□ 0.11
CLIC1-210ENST00000616760 KIF14Q15058 1648 aa15.73■□□□□ 0.11
CLIC1-210ENST00000616760 ATP1B4Q9UN42 357 aaPredicted RBP15.73■□□□□ 0.11
CLIC1-210ENST00000616760 PLCH2O75038 1416 aa15.72■□□□□ 0.11
CLIC1-210ENST00000616760 YEATS2Q9ULM3 1422 aa15.72■□□□□ 0.11
CLIC1-210ENST00000616760 POTEIP0CG38 1075 aa15.72■□□□□ 0.11
CLIC1-210ENST00000616760 CHRM1P11229 460 aaPredicted RBP15.71■□□□□ 0.11
CLIC1-210ENST00000616760 SCAPERQ9BY12 1400 aa15.7■□□□□ 0.1
CLIC1-210ENST00000616760 PREX1Q8TCU6 1659 aa15.7■□□□□ 0.1
CLIC1-210ENST00000616760 CDK11AQ9UQ88 783 aaPredicted RBP15.69■□□□□ 0.1
CLIC1-210ENST00000616760 IFNL1Q8IU54 200 aa15.68■□□□□ 0.1
CLIC1-210ENST00000616760 C9orf84Q5VXU9 1444 aa15.68■□□□□ 0.1
CLIC1-210ENST00000616760 ATP10AO60312 1499 aa15.67■□□□□ 0.1
CLIC1-210ENST00000616760 ARHGEF12Q9NZN5 1544 aa15.67■□□□□ 0.1
CLIC1-210ENST00000616760 CLIP1P30622 1438 aa15.67■□□□□ 0.1
CLIC1-210ENST00000616760 ZNF518AQ6AHZ1 1483 aa15.66■□□□□ 0.1
CLIC1-210ENST00000616760 EFCAB2Q5VUJ9 269 aa15.66■□□□□ 0.1
CLIC1-210ENST00000616760 ARHGAP5Q13017 1502 aa15.65■□□□□ 0.1
CLIC1-210ENST00000616760 TRPC6Q9Y210 931 aa15.65■□□□□ 0.1
CLIC1-210ENST00000616760 KDM5CP41229 1560 aa15.65■□□□□ 0.1
CLIC1-210ENST00000616760 LRRIQ1Q96JM4 1722 aa15.65■□□□□ 0.1
CLIC1-210ENST00000616760 TROQ12816 1431 aaPredicted RBP15.63■□□□□ 0.09
CLIC1-210ENST00000616760 MLECQ14165 292 aa15.63■□□□□ 0.09
CLIC1-210ENST00000616760 CDC42BPBQ9Y5S2 1711 aa15.62■□□□□ 0.09
CLIC1-210ENST00000616760 REREQ9P2R6 1566 aa15.62■□□□□ 0.09
CLIC1-210ENST00000616760 PREX2Q70Z35 1606 aa15.61■□□□□ 0.09
CLIC1-210ENST00000616760 CASKIN1Q8WXD9 1431 aa15.61■□□□□ 0.09
CLIC1-210ENST00000616760 HSPA2P54652 639 aa15.61■□□□□ 0.09
CLIC1-210ENST00000616760 SETD1BQ9UPS6 1966 aaKnown RBP15.61■□□□□ 0.09
CLIC1-210ENST00000616760 TIE1P35590 1138 aa15.6■□□□□ 0.09
CLIC1-210ENST00000616760 ASTLQ6HA08 431 aaPredicted RBP15.6■□□□□ 0.09
CLIC1-210ENST00000616760 PCDHB8Q9UN66 801 aa15.6■□□□□ 0.09
CLIC1-210ENST00000616760 CCDC18Q5T9S5 1454 aa15.59■□□□□ 0.09
CLIC1-210ENST00000616760 DIP2CQ9Y2E4 1556 aa15.59■□□□□ 0.09
CLIC1-210ENST00000616760 ITSN2Q9NZM3 1697 aa15.58■□□□□ 0.08
CLIC1-210ENST00000616760 ATMINO43313 823 aaPredicted RBP15.58■□□□□ 0.08
CLIC1-210ENST00000616760 ZNF467Q7Z7K2 595 aaPredicted RBP15.58■□□□□ 0.08
CLIC1-210ENST00000616760 FYCO1Q9BQS8 1478 aa15.58■□□□□ 0.08
CLIC1-210ENST00000616760 BMP2KQ9NSY1 1161 aaPredicted RBP15.57■□□□□ 0.08
CLIC1-210ENST00000616760 ABCA6Q8N139 1617 aa15.57■□□□□ 0.08
CLIC1-210ENST00000616760 CDC42BPAQ5VT25 1732 aa15.55■□□□□ 0.08
CLIC1-210ENST00000616760 C3P01024 1663 aa15.55■□□□□ 0.08
CLIC1-210ENST00000616760 ABCC1P33527 1531 aa15.55■□□□□ 0.08
CLIC1-210ENST00000616760 MLH3Q9UHC1 1453 aa15.55■□□□□ 0.08
CLIC1-210ENST00000616760 UHRF1BP1Q6BDS2 1440 aa15.55■□□□□ 0.08
CLIC1-210ENST00000616760 MYT1LQ9UL68 1186 aa15.55■□□□□ 0.08
CLIC1-210ENST00000616760 CERKQ8TCT0 537 aa15.54■□□□□ 0.08
CLIC1-210ENST00000616760 STRCQ7RTU9 1775 aa15.54■□□□□ 0.08
CLIC1-210ENST00000616760 AGLP35573 1532 aa15.53■□□□□ 0.08
CLIC1-210ENST00000616760 TTLL13PA6NNM8 815 aa15.52■□□□□ 0.08
CLIC1-210ENST00000616760 ATN1P54259 1190 aaPredicted RBP15.52■□□□□ 0.08
CLIC1-210ENST00000616760 PELP1Q8IZL8 1130 aaKnown RBP15.52■□□□□ 0.08
CLIC1-210ENST00000616760 PKD2Q13563 968 aa15.51■□□□□ 0.07
CLIC1-210ENST00000616760 AFAP1Q8N556 730 aa15.51■□□□□ 0.07
CLIC1-210ENST00000616760 KIDINS220Q9ULH0 1771 aa15.51■□□□□ 0.07
CLIC1-210ENST00000616760 ESF1Q9H501 851 aaKnown RBP15.5■□□□□ 0.07
CLIC1-210ENST00000616760 MROH2AA6NES4 1674 aa15.49■□□□□ 0.07
CLIC1-210ENST00000616760 CEP162Q5TB80 1403 aa15.49■□□□□ 0.07
CLIC1-210ENST00000616760 CEBPAP49715 358 aaPredicted RBP15.48■□□□□ 0.07
CLIC1-210ENST00000616760 TMEM106CQ9BVX2 250 aa15.48■□□□□ 0.07
CLIC1-210ENST00000616760 CNTLNQ9NXG0 1405 aa15.48■□□□□ 0.07
CLIC1-210ENST00000616760 TRAPPC8Q9Y2L5 1435 aa15.46■□□□□ 0.07
CLIC1-210ENST00000616760 SOCS7O14512 581 aa15.46■□□□□ 0.07
CLIC1-210ENST00000616760 ECM2O94769 699 aaPredicted RBP15.45■□□□□ 0.06
CLIC1-210ENST00000616760 SAMD9LQ8IVG5 1584 aa15.45■□□□□ 0.06
CLIC1-210ENST00000616760 RNF25Q96BH1 459 aaPredicted RBP15.44■□□□□ 0.06
CLIC1-210ENST00000616760 DISP3Q9P2K9 1392 aa15.44■□□□□ 0.06
CLIC1-210ENST00000616760 PTPRTO14522 1441 aa15.43■□□□□ 0.06
CLIC1-210ENST00000616760 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
CLIC1-210ENST00000616760 MTUS2Q5JR59 1369 aa15.42■□□□□ 0.06
CLIC1-210ENST00000616760 PSEN1P49768 467 aa15.42■□□□□ 0.06
CLIC1-210ENST00000616760 PDAP1Q13442 181 aaKnown RBP15.42■□□□□ 0.06
CLIC1-210ENST00000616760 TRIM35Q9UPQ4 493 aa15.42■□□□□ 0.06
CLIC1-210ENST00000616760 SYCP2Q9BX26 1530 aa15.42■□□□□ 0.06
CLIC1-210ENST00000616760 PLEKHH2Q8IVE3 1493 aa15.41■□□□□ 0.06
CLIC1-210ENST00000616760 SLC39A7Q92504 469 aa15.41■□□□□ 0.06
CLIC1-210ENST00000616760 ATP7AQ04656 1500 aa15.4■□□□□ 0.06
CLIC1-210ENST00000616760 RIOK3O14730 519 aaKnown RBP15.4■□□□□ 0.06
CLIC1-210ENST00000616760 NPATQ14207 1427 aa15.4■□□□□ 0.06
CLIC1-210ENST00000616760 INO80Q9ULG1 1556 aaPredicted RBP15.4■□□□□ 0.06
CLIC1-210ENST00000616760 C7P10643 843 aa15.39■□□□□ 0.05
CLIC1-210ENST00000616760 IQSEC2Q5JU85 1478 aa15.39■□□□□ 0.05
CLIC1-210ENST00000616760 ZNF142P52746 1687 aaPredicted RBP15.38■□□□□ 0.05
CLIC1-210ENST00000616760 CLTCQ00610 1675 aaKnown RBP15.38■□□□□ 0.05
CLIC1-210ENST00000616760 ADGBQ8N7X0 1667 aa15.38■□□□□ 0.05
CLIC1-210ENST00000616760 LOC105371045A0A1W2PR82 267 aa15.38■□□□□ 0.05
CLIC1-210ENST00000616760 GPATCH8Q9UKJ3 1502 aaKnown RBP15.38■□□□□ 0.05
CLIC1-210ENST00000616760 CCNB3Q8WWL7 1395 aa15.37■□□□□ 0.05
CLIC1-210ENST00000616760 PLXNC1O60486 1568 aa15.37■□□□□ 0.05
CLIC1-210ENST00000616760 NCOA1Q15788 1441 aa15.37■□□□□ 0.05
CLIC1-210ENST00000616760 METRNQ9UJH8 293 aa15.37■□□□□ 0.05
CLIC1-210ENST00000616760 SPAG9O60271 1321 aaKnown RBP15.37■□□□□ 0.05
CLIC1-210ENST00000616760 KIAA1107Q9UPP5 1409 aa15.36■□□□□ 0.05
CLIC1-210ENST00000616760 ZNF777Q9ULD5 760 aaPredicted RBP15.36■□□□□ 0.05
CLIC1-210ENST00000616760 EHBP1L1Q8N3D4 1523 aa15.36■□□□□ 0.05
CLIC1-210ENST00000616760 CAMSAP1Q5T5Y3 1602 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms