RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 STK26Q9P289 416 aa7.31□□□□□ -1.24
SYNCRIP-204ENST00000616122 LAS1LQ9Y4W2 734 aaKnown RBP7.31□□□□□ -1.24
SYNCRIP-204ENST00000616122 ADAMTS8Q9UP79 889 aa7.31□□□□□ -1.24
SYNCRIP-204ENST00000616122 BRD4O60885 1362 aaPredicted RBP7.31□□□□□ -1.24
SYNCRIP-204ENST00000616122 SNAPC4Q5SXM2 1469 aa7.31□□□□□ -1.24
SYNCRIP-204ENST00000616122 UNC13AQ9UPW8 1703 aa7.31□□□□□ -1.24
SYNCRIP-204ENST00000616122 CCDC146Q8IYE0 955 aa7.3□□□□□ -1.24
SYNCRIP-204ENST00000616122 MAPK8IP3Q9UPT6 1336 aa7.3□□□□□ -1.24
SYNCRIP-204ENST00000616122 LAMC3Q9Y6N6 1575 aa7.3□□□□□ -1.24
SYNCRIP-204ENST00000616122 CLUAP1Q96AJ1 413 aa7.29□□□□□ -1.24
SYNCRIP-204ENST00000616122 IPO9Q96P70 1041 aaKnown RBP7.29□□□□□ -1.24
SYNCRIP-204ENST00000616122 SYNJ2O15056 1496 aa7.29□□□□□ -1.24
SYNCRIP-204ENST00000616122 NUTM2DQ5VT03 806 aaPredicted RBP7.29□□□□□ -1.24
SYNCRIP-204ENST00000616122 PDE4AP27815 886 aa7.29□□□□□ -1.24
SYNCRIP-204ENST00000616122 PLPPR3Q6T4P5 718 aa7.28□□□□□ -1.24
SYNCRIP-204ENST00000616122 GRIN2AQ12879 1464 aa7.28□□□□□ -1.24
SYNCRIP-204ENST00000616122 FTSJ3Q8IY81 847 aaKnown RBP7.28□□□□□ -1.24
SYNCRIP-204ENST00000616122 MLECQ14165 292 aa7.28□□□□□ -1.24
SYNCRIP-204ENST00000616122 DDRGK1Q96HY6 314 aa7.27□□□□□ -1.25
SYNCRIP-204ENST00000616122 IQGAP2Q13576 1575 aa7.27□□□□□ -1.25
SYNCRIP-204ENST00000616122 GPATCH8Q9UKJ3 1502 aaKnown RBP7.27□□□□□ -1.25
SYNCRIP-204ENST00000616122 VGFO15240 615 aaPredicted RBP7.27□□□□□ -1.25
SYNCRIP-204ENST00000616122 RRP7AQ9Y3A4 280 aaKnown RBP7.27□□□□□ -1.25
SYNCRIP-204ENST00000616122 CENPJQ9HC77 1338 aaPredicted RBP7.26□□□□□ -1.25
SYNCRIP-204ENST00000616122 HSP90AA1P07900 732 aaKnown RBP7.26□□□□□ -1.25
SYNCRIP-204ENST00000616122 NGEFQ8N5V2 710 aa7.26□□□□□ -1.25
SYNCRIP-204ENST00000616122 TMEM132EQ6IEE7 984 aa7.26□□□□□ -1.25
SYNCRIP-204ENST00000616122 NUP153P49790 1475 aaKnown RBP7.26□□□□□ -1.25
SYNCRIP-204ENST00000616122 CRBNQ96SW2 442 aa7.26□□□□□ -1.25
SYNCRIP-204ENST00000616122 EIF3AQ14152 1382 aaKnown RBP7.26□□□□□ -1.25
SYNCRIP-204ENST00000616122 BCL2L13Q9BXK5 485 aa7.26□□□□□ -1.25
SYNCRIP-204ENST00000616122 PPP2R1AP30153 589 aa7.25□□□□□ -1.25
SYNCRIP-204ENST00000616122 OSCARQ8IYS5 282 aa7.25□□□□□ -1.25
SYNCRIP-204ENST00000616122 SLC12A5Q9H2X9 1139 aa7.25□□□□□ -1.25
SYNCRIP-204ENST00000616122 MAGI1Q96QZ7 1491 aaPredicted RBP7.25□□□□□ -1.25
SYNCRIP-204ENST00000616122 ARHGEF11O15085 1522 aa7.25□□□□□ -1.25
SYNCRIP-204ENST00000616122 MS4A1P11836 297 aa7.24□□□□□ -1.25
SYNCRIP-204ENST00000616122 COG6Q9Y2V7 657 aa7.24□□□□□ -1.25
SYNCRIP-204ENST00000616122 CGNL1Q0VF96 1302 aa7.24□□□□□ -1.25
SYNCRIP-204ENST00000616122 E9PSI1 815 aa7.24□□□□□ -1.25
SYNCRIP-204ENST00000616122 DEKP35659 375 aaKnown RBP7.24□□□□□ -1.25
SYNCRIP-204ENST00000616122 SCAPERQ9BY12 1400 aa7.24□□□□□ -1.25
SYNCRIP-204ENST00000616122 BECN1Q14457 450 aa7.24□□□□□ -1.25
SYNCRIP-204ENST00000616122 TERF2IPQ9NYB0 399 aa7.24□□□□□ -1.25
SYNCRIP-204ENST00000616122 PTPN23Q9H3S7 1636 aa7.23□□□□□ -1.25
SYNCRIP-204ENST00000616122 CYB5RLQ6IPT4 315 aa7.23□□□□□ -1.25
SYNCRIP-204ENST00000616122 TESK2Q96S53 571 aa7.23□□□□□ -1.25
SYNCRIP-204ENST00000616122 PER1O15534 1290 aaPredicted RBP7.23□□□□□ -1.25
SYNCRIP-204ENST00000616122 TCP11L2Q8N4U5 519 aa7.23□□□□□ -1.25
SYNCRIP-204ENST00000616122 MYH16Q9H6N6 1097 aa7.22□□□□□ -1.25
SYNCRIP-204ENST00000616122 SMG6Q86US8 1419 aaKnown RBP7.22□□□□□ -1.25
SYNCRIP-204ENST00000616122 MTHFSP49914 203 aa7.22□□□□□ -1.25
SYNCRIP-204ENST00000616122 UGGT2Q9NYU1 1516 aa7.22□□□□□ -1.25
SYNCRIP-204ENST00000616122 CENPQQ7L2Z9 268 aaPredicted RBP7.22□□□□□ -1.25
SYNCRIP-204ENST00000616122 HECW1Q76N89 1606 aa7.22□□□□□ -1.25
SYNCRIP-204ENST00000616122 CUL7Q14999 1698 aa7.22□□□□□ -1.25
SYNCRIP-204ENST00000616122 ATP10BO94823 1461 aa7.22□□□□□ -1.25
SYNCRIP-204ENST00000616122 HDGFL2Q7Z4V5 671 aaPredicted RBP7.22□□□□□ -1.25
SYNCRIP-204ENST00000616122 THOC2Q8NI27 1593 aaKnown RBP7.22□□□□□ -1.25
SYNCRIP-204ENST00000616122 PAK3O75914 559 aaPredicted RBP7.22□□□□□ -1.25
SYNCRIP-204ENST00000616122 CAMSAP2Q08AD1 1489 aa7.21□□□□□ -1.25
SYNCRIP-204ENST00000616122 MINK1Q8N4C8 1332 aaPredicted RBP7.21□□□□□ -1.26
SYNCRIP-204ENST00000616122 PLEKHH2Q8IVE3 1493 aa7.21□□□□□ -1.26
SYNCRIP-204ENST00000616122 ARXQ96QS3 562 aa7.21□□□□□ -1.26
SYNCRIP-204ENST00000616122 RWDD1Q9H446 243 aaPredicted RBP7.21□□□□□ -1.26
SYNCRIP-204ENST00000616122 SOX12O15370 315 aa7.21□□□□□ -1.26
SYNCRIP-204ENST00000616122 RAPGEF3O95398 923 aa7.21□□□□□ -1.26
SYNCRIP-204ENST00000616122 SMC4Q9NTJ3 1288 aa7.21□□□□□ -1.26
SYNCRIP-204ENST00000616122 MSH5O43196 834 aa7.2□□□□□ -1.26
SYNCRIP-204ENST00000616122 SUPT6HQ7KZ85 1726 aaKnown RBP7.2□□□□□ -1.26
SYNCRIP-204ENST00000616122 EVC2Q86UK5 1308 aa7.2□□□□□ -1.26
SYNCRIP-204ENST00000616122 CCDC141Q6ZP82 1450 aa7.2□□□□□ -1.26
SYNCRIP-204ENST00000616122 SLC4A3P48751 1232 aa7.2□□□□□ -1.26
SYNCRIP-204ENST00000616122 GGNBP2Q9H3C7 697 aa7.2□□□□□ -1.26
SYNCRIP-204ENST00000616122 IPO8O15397 1037 aaKnown RBP7.2□□□□□ -1.26
SYNCRIP-204ENST00000616122 TCOF1Q13428 1488 aaKnown RBP7.2□□□□□ -1.26
SYNCRIP-204ENST00000616122 SLKQ9H2G2 1235 aaPredicted RBP7.19□□□□□ -1.26
SYNCRIP-204ENST00000616122 ELL2O00472 640 aaPredicted RBP7.19□□□□□ -1.26
SYNCRIP-204ENST00000616122 FAM161AQ3B820 660 aa7.19□□□□□ -1.26
SYNCRIP-204ENST00000616122 BACH2Q9BYV9 841 aa7.19□□□□□ -1.26
SYNCRIP-204ENST00000616122 PNNQ9H307 717 aaKnown RBP7.19□□□□□ -1.26
SYNCRIP-204ENST00000616122 DHX29Q7Z478 1369 aaKnown RBP7.19□□□□□ -1.26
SYNCRIP-204ENST00000616122 AMER1Q5JTC6 1135 aaPredicted RBP7.18□□□□□ -1.26
SYNCRIP-204ENST00000616122 SPATA31E1Q6ZUB1 1445 aa7.18□□□□□ -1.26
SYNCRIP-204ENST00000616122 ARHGAP5Q13017 1502 aa7.18□□□□□ -1.26
SYNCRIP-204ENST00000616122 ADGRF5Q8IZF2 1346 aa7.18□□□□□ -1.26
SYNCRIP-204ENST00000616122 HDGFP51858 240 aaKnown RBP7.18□□□□□ -1.26
SYNCRIP-204ENST00000616122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.18□□□□□ -1.26
SYNCRIP-204ENST00000616122 PANK1Q8TE04 598 aa7.18□□□□□ -1.26
SYNCRIP-204ENST00000616122 BCAR3O75815 825 aa7.17□□□□□ -1.26
SYNCRIP-204ENST00000616122 HAP1P54257 671 aaPredicted RBP7.17□□□□□ -1.26
SYNCRIP-204ENST00000616122 ITPRIPQ8IWB1 547 aa7.17□□□□□ -1.26
SYNCRIP-204ENST00000616122 CHMP4BQ9H444 224 aaKnown RBP7.17□□□□□ -1.26
SYNCRIP-204ENST00000616122 NUTM2FA1L443 756 aa7.17□□□□□ -1.26
SYNCRIP-204ENST00000616122 C20orf194Q5TEA3 1177 aa7.17□□□□□ -1.26
SYNCRIP-204ENST00000616122 DISP1Q96F81 1524 aa7.17□□□□□ -1.26
SYNCRIP-204ENST00000616122 ZKSCAN2Q63HK3 967 aa7.17□□□□□ -1.26
SYNCRIP-204ENST00000616122 SKAP1Q86WV1 359 aa7.17□□□□□ -1.26
SYNCRIP-204ENST00000616122 RUNDC1Q96C34 613 aa7.17□□□□□ -1.26
SYNCRIP-204ENST00000616122 ERBINQ96RT1 1412 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms