RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 PES1O00541 588 aaKnown RBP23.38■■□□□ 1.33
GABPB1-212ENST00000615671 CFAP44Q96MT7 982 aa23.37■■□□□ 1.33
GABPB1-212ENST00000615671 GBP4Q96PP9 640 aa23.36■■□□□ 1.33
GABPB1-212ENST00000615671 PHF23Q9BUL5 403 aaPredicted RBP23.36■■□□□ 1.33
GABPB1-212ENST00000615671 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
GABPB1-212ENST00000615671 NECTIN2Q92692 538 aa23.36■■□□□ 1.33
GABPB1-212ENST00000615671 TPM4P67936 248 aa23.36■■□□□ 1.33
GABPB1-212ENST00000615671 HTATSF1O43719 755 aaKnown RBP23.35■■□□□ 1.33
GABPB1-212ENST00000615671 EIF3AQ14152 1382 aaKnown RBP23.34■■□□□ 1.33
GABPB1-212ENST00000615671 FOXD4L6Q3SYB3 417 aaPredicted RBP23.34■■□□□ 1.33
GABPB1-212ENST00000615671 FOXD4L3Q6VB84 417 aaPredicted RBP23.34■■□□□ 1.33
GABPB1-212ENST00000615671 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
GABPB1-212ENST00000615671 RILPL2Q969X0 211 aa23.33■■□□□ 1.33
GABPB1-212ENST00000615671 SAMD1Q6SPF0 538 aaPredicted RBP23.32■■□□□ 1.32
GABPB1-212ENST00000615671 C1orf141Q5JVX7 400 aa23.31■■□□□ 1.32
GABPB1-212ENST00000615671 HMMRO75330 724 aa23.31■■□□□ 1.32
GABPB1-212ENST00000615671 DEKP35659 375 aaKnown RBP23.31■■□□□ 1.32
GABPB1-212ENST00000615671 BCL2L13Q9BXK5 485 aa23.3■■□□□ 1.32
GABPB1-212ENST00000615671 EIF2S2P20042 333 aaKnown RBP23.3■■□□□ 1.32
GABPB1-212ENST00000615671 PMFBP1Q8TBY8 1022 aa23.29■■□□□ 1.32
GABPB1-212ENST00000615671 TRIM34Q9BYJ4 488 aa23.28■■□□□ 1.32
GABPB1-212ENST00000615671 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.32
GABPB1-212ENST00000615671 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.27■■□□□ 1.32
GABPB1-212ENST00000615671 CEP89Q96ST8 783 aa23.26■■□□□ 1.31
GABPB1-212ENST00000615671 SF3A1Q15459 793 aaKnown RBP23.26■■□□□ 1.31
GABPB1-212ENST00000615671 CTDP1Q9Y5B0 961 aaPredicted RBP23.26■■□□□ 1.31
GABPB1-212ENST00000615671 RALBP1Q15311 655 aa23.26■■□□□ 1.31
GABPB1-212ENST00000615671 CYB5RLQ6IPT4 315 aa23.25■■□□□ 1.31
GABPB1-212ENST00000615671 TCEAL9Q9UHQ7 104 aa23.24■■□□□ 1.31
GABPB1-212ENST00000615671 ABCC8Q09428 1581 aa23.24■■□□□ 1.31
GABPB1-212ENST00000615671 CENPJQ9HC77 1338 aaPredicted RBP23.24■■□□□ 1.31
GABPB1-212ENST00000615671 NACADO15069 1562 aa23.23■■□□□ 1.31
GABPB1-212ENST00000615671 SYAP1Q96A49 352 aaPredicted RBP23.23■■□□□ 1.31
GABPB1-212ENST00000615671 KRI1Q8N9T8 703 aaKnown RBP23.23■■□□□ 1.31
GABPB1-212ENST00000615671 KIF16BQ96L93 1317 aa23.23■■□□□ 1.31
GABPB1-212ENST00000615671 TPD52L1Q16890 204 aaPredicted RBP23.22■■□□□ 1.31
GABPB1-212ENST00000615671 H3BQV1 296 aa23.22■■□□□ 1.31
GABPB1-212ENST00000615671 IFFO2Q5TF58 517 aa23.22■■□□□ 1.31
GABPB1-212ENST00000615671 RBM19Q9Y4C8 960 aaKnown RBP23.21■■□□□ 1.31
GABPB1-212ENST00000615671 MINK1Q8N4C8 1332 aaPredicted RBP23.21■■□□□ 1.31
GABPB1-212ENST00000615671 CCDC34Q96HJ3 373 aa23.2■■□□□ 1.3
GABPB1-212ENST00000615671 TTC5Q8N0Z6 440 aa23.2■■□□□ 1.3
GABPB1-212ENST00000615671 RAB3GAP2Q9H2M9 1393 aa23.19■■□□□ 1.3
GABPB1-212ENST00000615671 TCERG1O14776 1098 aaKnown RBP23.19■■□□□ 1.3
GABPB1-212ENST00000615671 CCER2I3L3R5 266 aa23.19■■□□□ 1.3
GABPB1-212ENST00000615671 LMOD3Q0VAK6 560 aa23.19■■□□□ 1.3
GABPB1-212ENST00000615671 COG3Q96JB2 828 aa23.19■■□□□ 1.3
GABPB1-212ENST00000615671 CWC22Q9HCG8 908 aaKnown RBP23.19■■□□□ 1.3
GABPB1-212ENST00000615671 DHX16O60231 1041 aaKnown RBP23.18■■□□□ 1.3
GABPB1-212ENST00000615671 CNKSR2Q8WXI2 1034 aa23.18■■□□□ 1.3
GABPB1-212ENST00000615671 AKAP17AQ02040 695 aaKnown RBP23.17■■□□□ 1.3
GABPB1-212ENST00000615671 CHMP4AQ9BY43 222 aa23.17■■□□□ 1.3
GABPB1-212ENST00000615671 MCTP1Q6DN14 999 aa23.17■■□□□ 1.3
GABPB1-212ENST00000615671 NOL10Q9BSC4 688 aaKnown RBP23.17■■□□□ 1.3
GABPB1-212ENST00000615671 HDAC5Q9UQL6 1122 aa23.17■■□□□ 1.3
GABPB1-212ENST00000615671 VPS37DQ86XT2 251 aa23.16■■□□□ 1.3
GABPB1-212ENST00000615671 ANKRD45Q5TZF3 282 aa23.16■■□□□ 1.3
GABPB1-212ENST00000615671 APPP05067 770 aa23.16■■□□□ 1.3
GABPB1-212ENST00000615671 TEFQ10587 303 aa23.15■■□□□ 1.3
GABPB1-212ENST00000615671 FAM184AQ8NB25 1140 aa23.15■■□□□ 1.3
GABPB1-212ENST00000615671 L3MBTL2Q969R5 705 aa23.14■■□□□ 1.3
GABPB1-212ENST00000615671 PLIN1O60240 522 aa23.13■■□□□ 1.29
GABPB1-212ENST00000615671 PSME1Q06323 249 aa23.13■■□□□ 1.29
GABPB1-212ENST00000615671 FOSBP53539 338 aa23.13■■□□□ 1.29
GABPB1-212ENST00000615671 TPM3P06753 285 aa23.13■■□□□ 1.29
GABPB1-212ENST00000615671 BAZ1AQ9NRL2 1556 aaPredicted RBP23.12■■□□□ 1.29
GABPB1-212ENST00000615671 PTMSP20962 102 aa23.12■■□□□ 1.29
GABPB1-212ENST00000615671 CSPP1Q1MSJ5 1256 aa23.12■■□□□ 1.29
GABPB1-212ENST00000615671 NUTM2GQ5VZR2 741 aa23.12■■□□□ 1.29
GABPB1-212ENST00000615671 PANK3Q9H999 370 aa23.12■■□□□ 1.29
GABPB1-212ENST00000615671 FYB1O15117 783 aa23.11■■□□□ 1.29
GABPB1-212ENST00000615671 GOLGA6L1Q8N7Z2 621 aa23.11■■□□□ 1.29
GABPB1-212ENST00000615671 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
GABPB1-212ENST00000615671 AMOTL1Q8IY63 956 aa23.1■■□□□ 1.29
GABPB1-212ENST00000615671 C9orf78Q9NZ63 289 aaPredicted RBP23.1■■□□□ 1.29
GABPB1-212ENST00000615671 GOLGA6L3A6NEY3 463 aa23.1■■□□□ 1.29
GABPB1-212ENST00000615671 CCAR2Q8N163 923 aaKnown RBP23.1■■□□□ 1.29
GABPB1-212ENST00000615671 FHOD3Q2V2M9 1422 aa23.1■■□□□ 1.29
GABPB1-212ENST00000615671 ST18O60284 1047 aa23.09■■□□□ 1.29
GABPB1-212ENST00000615671 KDM4AO75164 1064 aa23.08■■□□□ 1.28
GABPB1-212ENST00000615671 SYNE3Q6ZMZ3 975 aa23.08■■□□□ 1.28
GABPB1-212ENST00000615671 MTMR7Q9Y216 660 aa23.07■■□□□ 1.28
GABPB1-212ENST00000615671 PCMTD1Q96MG8 357 aaPredicted RBP23.07■■□□□ 1.28
GABPB1-212ENST00000615671 SLC4A3P48751 1232 aa23.06■■□□□ 1.28
GABPB1-212ENST00000615671 NEXNQ0ZGT2 675 aa23.05■■□□□ 1.28
GABPB1-212ENST00000615671 PATL2C9JE40 543 aaKnown RBP23.04■■□□□ 1.28
GABPB1-212ENST00000615671 PPP1R1BQ9UD71 204 aaPredicted RBP23.04■■□□□ 1.28
GABPB1-212ENST00000615671 FAM177BA6PVY3 158 aa23.03■■□□□ 1.28
GABPB1-212ENST00000615671 DIAPH3Q9NSV4 1193 aa23.03■■□□□ 1.28
GABPB1-212ENST00000615671 ANO2Q9NQ90 1003 aa23.03■■□□□ 1.28
GABPB1-212ENST00000615671 ST20-MTHFSA0A0A6YYL1 179 aa23.03■■□□□ 1.28
GABPB1-212ENST00000615671 USP35Q9P2H5 1018 aa23.02■■□□□ 1.27
GABPB1-212ENST00000615671 AIMP1Q12904 312 aaKnown RBP23.01■■□□□ 1.27
GABPB1-212ENST00000615671 FMN1Q68DA7 1419 aa23.01■■□□□ 1.27
GABPB1-212ENST00000615671 TSR1Q2NL82 804 aaKnown RBP23■■□□□ 1.27
GABPB1-212ENST00000615671 KIF3AQ9Y496 699 aa23■■□□□ 1.27
GABPB1-212ENST00000615671 NFXL1Q6ZNB6 911 aa23■■□□□ 1.27
GABPB1-212ENST00000615671 RBM33Q96EV2 1170 aaKnown RBP23■■□□□ 1.27
GABPB1-212ENST00000615671 TIMELESSQ9UNS1 1208 aa23■■□□□ 1.27
GABPB1-212ENST00000615671 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms