RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 ADGBQ8N7X0 1667 aa16.24■□□□□ 0.19
PPP4R3B-204ENST00000612688 SHANK2Q9UPX8 1470 aa16.23■□□□□ 0.19
PPP4R3B-204ENST00000612688 L3MBTL2Q969R5 705 aa16.23■□□□□ 0.19
PPP4R3B-204ENST00000612688 ABCC1P33527 1531 aa16.22■□□□□ 0.19
PPP4R3B-204ENST00000612688 CCDC184Q52MB2 194 aa16.22■□□□□ 0.19
PPP4R3B-204ENST00000612688 ABCA9Q8IUA7 1624 aa16.22■□□□□ 0.19
PPP4R3B-204ENST00000612688 PZPP20742 1482 aa16.21■□□□□ 0.19
PPP4R3B-204ENST00000612688 POLR3GLQ9BT43 218 aa16.2■□□□□ 0.18
PPP4R3B-204ENST00000612688 KDM2AQ9Y2K7 1162 aa16.2■□□□□ 0.18
PPP4R3B-204ENST00000612688 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
PPP4R3B-204ENST00000612688 GGT6Q6P531 493 aa16.19■□□□□ 0.18
PPP4R3B-204ENST00000612688 SALL2Q9Y467 1007 aaPredicted RBP16.19■□□□□ 0.18
PPP4R3B-204ENST00000612688 ANKRD30BQ9BXX2 1392 aa16.19■□□□□ 0.18
PPP4R3B-204ENST00000612688 FAM9BQ8IZU0 186 aa16.19■□□□□ 0.18
PPP4R3B-204ENST00000612688 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.17■□□□□ 0.18
PPP4R3B-204ENST00000612688 TSPOAP1O95153 1857 aa16.15■□□□□ 0.18
PPP4R3B-204ENST00000612688 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
PPP4R3B-204ENST00000612688 TRHP20396 242 aaPredicted RBP16.14■□□□□ 0.17
PPP4R3B-204ENST00000612688 TIMELESSQ9UNS1 1208 aa16.13■□□□□ 0.17
PPP4R3B-204ENST00000612688 CCER2I3L3R5 266 aa16.11■□□□□ 0.17
PPP4R3B-204ENST00000612688 NBPF8Q3BBV2 869 aa16.11■□□□□ 0.17
PPP4R3B-204ENST00000612688 ATP7AQ04656 1500 aa16.1■□□□□ 0.17
PPP4R3B-204ENST00000612688 ARAP3Q8WWN8 1544 aa16.1■□□□□ 0.17
PPP4R3B-204ENST00000612688 DUOX2Q9NRD8 1548 aa16.1■□□□□ 0.17
PPP4R3B-204ENST00000612688 DCAF11Q8TEB1 546 aa16.1■□□□□ 0.17
PPP4R3B-204ENST00000612688 ZFYVE16Q7Z3T8 1539 aa16.1■□□□□ 0.17
PPP4R3B-204ENST00000612688 C11orf95C9JLR9 678 aaPredicted RBP16.09■□□□□ 0.17
PPP4R3B-204ENST00000612688 FAM135AQ9P2D6 1515 aa16.09■□□□□ 0.17
PPP4R3B-204ENST00000612688 WASHC2AQ641Q2 1341 aa16.09■□□□□ 0.17
PPP4R3B-204ENST00000612688 ZNF518AQ6AHZ1 1483 aa16.09■□□□□ 0.17
PPP4R3B-204ENST00000612688 B4GALNT3Q6L9W6 998 aa16.08■□□□□ 0.17
PPP4R3B-204ENST00000612688 MLECQ14165 292 aa16.08■□□□□ 0.16
PPP4R3B-204ENST00000612688 MAST1Q9Y2H9 1570 aa16.07■□□□□ 0.16
PPP4R3B-204ENST00000612688 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
PPP4R3B-204ENST00000612688 POGZQ7Z3K3 1410 aa16.07■□□□□ 0.16
PPP4R3B-204ENST00000612688 RTEL1-TNFRSF6BF6WH68 1400 aa16.06■□□□□ 0.16
PPP4R3B-204ENST00000612688 SENP3Q9H4L4 574 aaPredicted RBP16.06■□□□□ 0.16
PPP4R3B-204ENST00000612688 RPRD2Q5VT52 1461 aaKnown RBP16.06■□□□□ 0.16
PPP4R3B-204ENST00000612688 DHX29Q7Z478 1369 aaKnown RBP16.06■□□□□ 0.16
PPP4R3B-204ENST00000612688 PAK3O75914 559 aaPredicted RBP16.06■□□□□ 0.16
PPP4R3B-204ENST00000612688 IL27Q8NEV9 243 aa16.06■□□□□ 0.16
PPP4R3B-204ENST00000612688 ERBINQ96RT1 1412 aa16.05■□□□□ 0.16
PPP4R3B-204ENST00000612688 PLXNC1O60486 1568 aa16.05■□□□□ 0.16
PPP4R3B-204ENST00000612688 CHGAP10645 457 aaKnown RBP16.05■□□□□ 0.16
PPP4R3B-204ENST00000612688 CCDC144AA2RUR9 1427 aa16.03■□□□□ 0.16
PPP4R3B-204ENST00000612688 YEATS2Q9ULM3 1422 aa16.03■□□□□ 0.16
PPP4R3B-204ENST00000612688 KANK1Q14678 1352 aa16.03■□□□□ 0.16
PPP4R3B-204ENST00000612688 MRS2Q9HD23 443 aa16.02■□□□□ 0.16
PPP4R3B-204ENST00000612688 WASHC2CQ9Y4E1 1318 aa16.02■□□□□ 0.16
PPP4R3B-204ENST00000612688 DIP2BQ9P265 1576 aa16.02■□□□□ 0.16
PPP4R3B-204ENST00000612688 A2MP01023 1474 aa16.01■□□□□ 0.15
PPP4R3B-204ENST00000612688 NEO1Q92859 1461 aa16.01■□□□□ 0.15
PPP4R3B-204ENST00000612688 KIDINS220Q9ULH0 1771 aa16.01■□□□□ 0.15
PPP4R3B-204ENST00000612688 CFAP65Q6ZU64 1925 aaKnown RBP16■□□□□ 0.15
PPP4R3B-204ENST00000612688 INO80Q9ULG1 1556 aaPredicted RBP15.99■□□□□ 0.15
PPP4R3B-204ENST00000612688 EIF4G2P78344 907 aaKnown RBP eCLIP15.99■□□□□ 0.15
PPP4R3B-204ENST00000612688 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
PPP4R3B-204ENST00000612688 RTL5Q5HYW3 569 aaPredicted RBP15.98■□□□□ 0.15
PPP4R3B-204ENST00000612688 NOP58Q9Y2X3 529 aaKnown RBP15.98■□□□□ 0.15
PPP4R3B-204ENST00000612688 MAP3K4Q9Y6R4 1608 aa15.98■□□□□ 0.15
PPP4R3B-204ENST00000612688 PLA2R1Q13018 1463 aa15.97■□□□□ 0.15
PPP4R3B-204ENST00000612688 TEX14Q8IWB6 1497 aa15.97■□□□□ 0.15
PPP4R3B-204ENST00000612688 KDM5DQ9BY66 1539 aa15.96■□□□□ 0.15
PPP4R3B-204ENST00000612688 ARID4BQ4LE39 1312 aaPredicted RBP15.96■□□□□ 0.14
PPP4R3B-204ENST00000612688 CFAP74Q9C0B2 1584 aa15.96■□□□□ 0.14
PPP4R3B-204ENST00000612688 UNC13BO14795 1591 aa15.95■□□□□ 0.14
PPP4R3B-204ENST00000612688 MLH3Q9UHC1 1453 aa15.94■□□□□ 0.14
PPP4R3B-204ENST00000612688 HECW2Q9P2P5 1572 aa15.94■□□□□ 0.14
PPP4R3B-204ENST00000612688 CARD11Q9BXL7 1154 aa15.94■□□□□ 0.14
PPP4R3B-204ENST00000612688 COL17A1Q9UMD9 1497 aaPredicted RBP15.94■□□□□ 0.14
PPP4R3B-204ENST00000612688 NUTM2DQ5VT03 806 aaPredicted RBP15.93■□□□□ 0.14
PPP4R3B-204ENST00000612688 GLI2P10070 1586 aa15.93■□□□□ 0.14
PPP4R3B-204ENST00000612688 EIF5BO60841 1220 aaKnown RBP15.93■□□□□ 0.14
PPP4R3B-204ENST00000612688 NPM2Q86SE8 214 aaKnown RBP15.92■□□□□ 0.14
PPP4R3B-204ENST00000612688 KDM5CP41229 1560 aa15.92■□□□□ 0.14
PPP4R3B-204ENST00000612688 ABCA6Q8N139 1617 aa15.92■□□□□ 0.14
PPP4R3B-204ENST00000612688 NBPF1Q3BBV0 1214 aa15.92■□□□□ 0.14
PPP4R3B-204ENST00000612688 IQGAP3Q86VI3 1631 aa15.91■□□□□ 0.14
PPP4R3B-204ENST00000612688 PRKRIP1Q9H875 184 aaPredicted RBP15.9■□□□□ 0.14
PPP4R3B-204ENST00000612688 FRMPD1Q5SYB0 1578 aa15.89■□□□□ 0.13
PPP4R3B-204ENST00000612688 UGGT1Q9NYU2 1555 aa15.89■□□□□ 0.13
PPP4R3B-204ENST00000612688 MAGI2Q86UL8 1455 aa15.89■□□□□ 0.13
PPP4R3B-204ENST00000612688 FBXO31Q5XUX0 539 aaPredicted RBP15.88■□□□□ 0.13
PPP4R3B-204ENST00000612688 KIF13AQ9H1H9 1805 aa15.87■□□□□ 0.13
PPP4R3B-204ENST00000612688 ATP10AO60312 1499 aa15.87■□□□□ 0.13
PPP4R3B-204ENST00000612688 RICTORQ6R327 1708 aa15.87■□□□□ 0.13
PPP4R3B-204ENST00000612688 DNAJC5Q9H3Z4 198 aa15.87■□□□□ 0.13
PPP4R3B-204ENST00000612688 E9PCH4 1651 aa15.86■□□□□ 0.13
PPP4R3B-204ENST00000612688 DIP2CQ9Y2E4 1556 aa15.86■□□□□ 0.13
PPP4R3B-204ENST00000612688 LAS1LQ9Y4W2 734 aaKnown RBP15.86■□□□□ 0.13
PPP4R3B-204ENST00000612688 PPRC1Q5VV67 1664 aaKnown RBP15.86■□□□□ 0.13
PPP4R3B-204ENST00000612688 ROCK2O75116 1388 aaKnown RBP15.86■□□□□ 0.13
PPP4R3B-204ENST00000612688 ESF1Q9H501 851 aaKnown RBP15.85■□□□□ 0.13
PPP4R3B-204ENST00000612688 ST20-MTHFSA0A0A6YYL1 179 aa15.84■□□□□ 0.13
PPP4R3B-204ENST00000612688 PPP4R2Q9NY27 417 aa15.84■□□□□ 0.13
PPP4R3B-204ENST00000612688 MROH1Q8NDA8 1641 aa15.84■□□□□ 0.13
PPP4R3B-204ENST00000612688 USP47Q96K76 1375 aa15.84■□□□□ 0.13
PPP4R3B-204ENST00000612688 KIF7Q2M1P5 1343 aa15.84■□□□□ 0.13
PPP4R3B-204ENST00000612688 NPATQ14207 1427 aa15.83■□□□□ 0.13
PPP4R3B-204ENST00000612688 CEP152O94986 1710 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms