RNA–Protein interactions for RNA: ENST00000612570.4

NDFIP2-205, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-205ENST00000612570 TRIM44Q96DX7 344 aaPredicted RBP18.59■□□□□ 0.57
NDFIP2-205ENST00000612570 DAPK1P53355 1430 aa18.59■□□□□ 0.57
NDFIP2-205ENST00000612570 TSHZ2Q9NRE2 1034 aa18.58■□□□□ 0.57
NDFIP2-205ENST00000612570 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
NDFIP2-205ENST00000612570 ZNF608Q9ULD9 1512 aaPredicted RBP18.57■□□□□ 0.56
NDFIP2-205ENST00000612570 WDR97A6NE52 1622 aa18.57■□□□□ 0.56
NDFIP2-205ENST00000612570 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
NDFIP2-205ENST00000612570 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.56
NDFIP2-205ENST00000612570 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
NDFIP2-205ENST00000612570 NOP58Q9Y2X3 529 aaKnown RBP18.56■□□□□ 0.56
NDFIP2-205ENST00000612570 CNTLNQ9NXG0 1405 aa18.55■□□□□ 0.56
NDFIP2-205ENST00000612570 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
NDFIP2-205ENST00000612570 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
NDFIP2-205ENST00000612570 PDE3BQ13370 1112 aa18.54■□□□□ 0.56
NDFIP2-205ENST00000612570 TAOK2Q9UL54 1235 aa18.54■□□□□ 0.56
NDFIP2-205ENST00000612570 KIAA1107Q9UPP5 1409 aa18.53■□□□□ 0.56
NDFIP2-205ENST00000612570 PLB1Q6P1J6 1458 aa18.53■□□□□ 0.56
NDFIP2-205ENST00000612570 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
NDFIP2-205ENST00000612570 CCDC146Q8IYE0 955 aa18.53■□□□□ 0.56
NDFIP2-205ENST00000612570 PNNQ9H307 717 aaKnown RBP18.53■□□□□ 0.56
NDFIP2-205ENST00000612570 GRIN2AQ12879 1464 aa18.53■□□□□ 0.56
NDFIP2-205ENST00000612570 SOX12O15370 315 aa18.52■□□□□ 0.56
NDFIP2-205ENST00000612570 GOLGA2Q08379 1002 aa18.51■□□□□ 0.55
NDFIP2-205ENST00000612570 SPRYD3Q8NCJ5 442 aa18.5■□□□□ 0.55
NDFIP2-205ENST00000612570 ROCK1Q13464 1354 aa18.5■□□□□ 0.55
NDFIP2-205ENST00000612570 GOLGA6L22H0YM25 854 aa18.49■□□□□ 0.55
NDFIP2-205ENST00000612570 VGFO15240 615 aaPredicted RBP18.49■□□□□ 0.55
NDFIP2-205ENST00000612570 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
NDFIP2-205ENST00000612570 NBPF1Q3BBV0 1214 aa18.48■□□□□ 0.55
NDFIP2-205ENST00000612570 MS4A1P11836 297 aa18.47■□□□□ 0.55
NDFIP2-205ENST00000612570 TERF2IPQ9NYB0 399 aa18.47■□□□□ 0.55
NDFIP2-205ENST00000612570 PLCB2Q00722 1185 aa18.46■□□□□ 0.55
NDFIP2-205ENST00000612570 ABCC5O15440 1437 aa18.46■□□□□ 0.55
NDFIP2-205ENST00000612570 PTMAP06454 111 aaKnown RBP18.46■□□□□ 0.55
NDFIP2-205ENST00000612570 STAC3Q96MF2 364 aa18.45■□□□□ 0.54
NDFIP2-205ENST00000612570 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
NDFIP2-205ENST00000612570 PTPN23Q9H3S7 1636 aa18.45■□□□□ 0.54
NDFIP2-205ENST00000612570 ARHGEF11O15085 1522 aa18.43■□□□□ 0.54
NDFIP2-205ENST00000612570 ANKRD30BQ9BXX2 1392 aa18.42■□□□□ 0.54
NDFIP2-205ENST00000612570 DNTTIP2Q5QJE6 756 aaKnown RBP18.41■□□□□ 0.54
NDFIP2-205ENST00000612570 DEKP35659 375 aaKnown RBP18.41■□□□□ 0.54
NDFIP2-205ENST00000612570 NAP1L5Q96NT1 182 aaPredicted RBP18.4■□□□□ 0.54
NDFIP2-205ENST00000612570 PTPRKQ15262 1439 aa18.39■□□□□ 0.53
NDFIP2-205ENST00000612570 CFAP70Q5T0N1 1121 aa18.39■□□□□ 0.53
NDFIP2-205ENST00000612570 CAMSAP2Q08AD1 1489 aa18.38■□□□□ 0.53
NDFIP2-205ENST00000612570 PLEKHH2Q8IVE3 1493 aa18.38■□□□□ 0.53
NDFIP2-205ENST00000612570 RRP7AQ9Y3A4 280 aaKnown RBP18.38■□□□□ 0.53
NDFIP2-205ENST00000612570 EVC2Q86UK5 1308 aa18.38■□□□□ 0.53
NDFIP2-205ENST00000612570 NCOA1Q15788 1441 aa18.38■□□□□ 0.53
NDFIP2-205ENST00000612570 FAM69CQ0P6D2 419 aa18.37■□□□□ 0.53
NDFIP2-205ENST00000612570 CENPJQ9HC77 1338 aaPredicted RBP18.37■□□□□ 0.53
NDFIP2-205ENST00000612570 PLIN1O60240 522 aa18.37■□□□□ 0.53
NDFIP2-205ENST00000612570 CCDC184Q52MB2 194 aa18.37■□□□□ 0.53
NDFIP2-205ENST00000612570 SCAPERQ9BY12 1400 aa18.37■□□□□ 0.53
NDFIP2-205ENST00000612570 APAF1O14727 1248 aa18.37■□□□□ 0.53
NDFIP2-205ENST00000612570 TCERG1O14776 1098 aaKnown RBP18.37■□□□□ 0.53
NDFIP2-205ENST00000612570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.37■□□□□ 0.53
NDFIP2-205ENST00000612570 CHMP4BQ9H444 224 aaKnown RBP18.37■□□□□ 0.53
NDFIP2-205ENST00000612570 APBB1O00213 710 aa18.36■□□□□ 0.53
NDFIP2-205ENST00000612570 MINK1Q8N4C8 1332 aaPredicted RBP18.36■□□□□ 0.53
NDFIP2-205ENST00000612570 AKNAQ7Z591 1439 aa18.36■□□□□ 0.53
NDFIP2-205ENST00000612570 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
NDFIP2-205ENST00000612570 RRP1P56182 461 aaKnown RBP18.35■□□□□ 0.53
NDFIP2-205ENST00000612570 C11orf95C9JLR9 678 aaPredicted RBP18.35■□□□□ 0.53
NDFIP2-205ENST00000612570 TMEM132EQ6IEE7 984 aa18.35■□□□□ 0.53
NDFIP2-205ENST00000612570 HSP90AB1P08238 724 aaKnown RBP18.34■□□□□ 0.53
NDFIP2-205ENST00000612570 EXOC6Q8TAG9 804 aa18.34■□□□□ 0.53
NDFIP2-205ENST00000612570 CLUAP1Q96AJ1 413 aa18.34■□□□□ 0.53
NDFIP2-205ENST00000612570 NUTM2FA1L443 756 aa18.34■□□□□ 0.53
NDFIP2-205ENST00000612570 THOC2Q8NI27 1593 aaKnown RBP18.34■□□□□ 0.53
NDFIP2-205ENST00000612570 HAP1P54257 671 aaPredicted RBP18.33■□□□□ 0.52
NDFIP2-205ENST00000612570 IPO8O15397 1037 aaKnown RBP18.32■□□□□ 0.52
NDFIP2-205ENST00000612570 BRD4O60885 1362 aaPredicted RBP18.32■□□□□ 0.52
NDFIP2-205ENST00000612570 SLKQ9H2G2 1235 aaPredicted RBP18.32■□□□□ 0.52
NDFIP2-205ENST00000612570 CCDC141Q6ZP82 1450 aa18.31■□□□□ 0.52
NDFIP2-205ENST00000612570 SMC4Q9NTJ3 1288 aa18.3■□□□□ 0.52
NDFIP2-205ENST00000612570 EID1Q9Y6B2 187 aa18.3■□□□□ 0.52
NDFIP2-205ENST00000612570 MAPKBP1O60336 1514 aa18.3■□□□□ 0.52
NDFIP2-205ENST00000612570 CASC1Q6TDU7 716 aa18.29■□□□□ 0.52
NDFIP2-205ENST00000612570 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
NDFIP2-205ENST00000612570 TULP1O00294 542 aaPredicted RBP18.28■□□□□ 0.52
NDFIP2-205ENST00000612570 PAK3O75914 559 aaPredicted RBP18.28■□□□□ 0.52
NDFIP2-205ENST00000612570 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
NDFIP2-205ENST00000612570 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
NDFIP2-205ENST00000612570 OS9Q13438 667 aaPredicted RBP18.28■□□□□ 0.52
NDFIP2-205ENST00000612570 GZF1Q9H116 711 aaPredicted RBP18.28■□□□□ 0.52
NDFIP2-205ENST00000612570 ZRSR1Q15695 479 aaKnown RBP18.27■□□□□ 0.52
NDFIP2-205ENST00000612570 E9PSI1 815 aa18.27■□□□□ 0.52
NDFIP2-205ENST00000612570 ADAMTS8Q9UP79 889 aa18.27■□□□□ 0.52
NDFIP2-205ENST00000612570 PNISRQ8TF01 805 aaKnown RBP18.27■□□□□ 0.52
NDFIP2-205ENST00000612570 GPATCH8Q9UKJ3 1502 aaKnown RBP18.27■□□□□ 0.51
NDFIP2-205ENST00000612570 NAP1L2Q9ULW6 460 aaPredicted RBP18.26■□□□□ 0.51
NDFIP2-205ENST00000612570 UGGT2Q9NYU1 1516 aa18.26■□□□□ 0.51
NDFIP2-205ENST00000612570 BCL2L13Q9BXK5 485 aa18.26■□□□□ 0.51
NDFIP2-205ENST00000612570 RWDD1Q9H446 243 aaPredicted RBP18.26■□□□□ 0.51
NDFIP2-205ENST00000612570 KCNJ4P48050 445 aa18.26■□□□□ 0.51
NDFIP2-205ENST00000612570 CRBNQ96SW2 442 aa18.26■□□□□ 0.51
NDFIP2-205ENST00000612570 RAPGEF3O95398 923 aa18.25■□□□□ 0.51
NDFIP2-205ENST00000612570 NUP153P49790 1475 aaKnown RBP18.25■□□□□ 0.51
NDFIP2-205ENST00000612570 FGD1P98174 961 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms