RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 HDGFL2Q7Z4V5 671 aaPredicted RBP15.8■□□□□ 0.12
CDH1-212ENST00000611625 MAP3K1Q13233 1512 aa15.8■□□□□ 0.12
CDH1-212ENST00000611625 USP35Q9P2H5 1018 aa15.8■□□□□ 0.12
CDH1-212ENST00000611625 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
CDH1-212ENST00000611625 NESP48681 1621 aa15.79■□□□□ 0.12
CDH1-212ENST00000611625 PCF11O94913 1555 aaKnown RBP15.79■□□□□ 0.12
CDH1-212ENST00000611625 NAP1L5Q96NT1 182 aaPredicted RBP15.79■□□□□ 0.12
CDH1-212ENST00000611625 BRD4O60885 1362 aaPredicted RBP15.79■□□□□ 0.12
CDH1-212ENST00000611625 FAM161AQ3B820 660 aa15.78■□□□□ 0.12
CDH1-212ENST00000611625 SMC4Q9NTJ3 1288 aa15.78■□□□□ 0.12
CDH1-212ENST00000611625 CCDC184Q52MB2 194 aa15.77■□□□□ 0.11
CDH1-212ENST00000611625 GRIN2BQ13224 1484 aa15.76■□□□□ 0.11
CDH1-212ENST00000611625 E9PSI1 815 aa15.76■□□□□ 0.11
CDH1-212ENST00000611625 PLEKHG5O94827 1062 aa15.76■□□□□ 0.11
CDH1-212ENST00000611625 TRAK1Q9UPV9 953 aa15.76■□□□□ 0.11
CDH1-212ENST00000611625 APAF1O14727 1248 aa15.76■□□□□ 0.11
CDH1-212ENST00000611625 PTMAP06454 111 aaKnown RBP15.76■□□□□ 0.11
CDH1-212ENST00000611625 RRP7AQ9Y3A4 280 aaKnown RBP15.75■□□□□ 0.11
CDH1-212ENST00000611625 HAP1P54257 671 aaPredicted RBP15.74■□□□□ 0.11
CDH1-212ENST00000611625 DNMBPQ6XZF7 1577 aa15.74■□□□□ 0.11
CDH1-212ENST00000611625 SUPT6HQ7KZ85 1726 aaKnown RBP15.74■□□□□ 0.11
CDH1-212ENST00000611625 SLC4A3P48751 1232 aa15.73■□□□□ 0.11
CDH1-212ENST00000611625 KIAA1107Q9UPP5 1409 aa15.73■□□□□ 0.11
CDH1-212ENST00000611625 CGNL1Q0VF96 1302 aa15.73■□□□□ 0.11
CDH1-212ENST00000611625 MFAP1P55081 439 aaKnown RBP15.73■□□□□ 0.11
CDH1-212ENST00000611625 CALD1Q05682 793 aaKnown RBP15.73■□□□□ 0.11
CDH1-212ENST00000611625 TERF2IPQ9NYB0 399 aa15.72■□□□□ 0.11
CDH1-212ENST00000611625 ABCA10Q8WWZ4 1543 aa15.72■□□□□ 0.11
CDH1-212ENST00000611625 CFAP44Q96MT7 982 aa15.71■□□□□ 0.11
CDH1-212ENST00000611625 BIVM-ERCC5R4GMW8 1640 aa15.71■□□□□ 0.11
CDH1-212ENST00000611625 HECW1Q76N89 1606 aa15.71■□□□□ 0.11
CDH1-212ENST00000611625 AKNAQ7Z591 1439 aa15.71■□□□□ 0.1
CDH1-212ENST00000611625 GZF1Q9H116 711 aaPredicted RBP15.71■□□□□ 0.1
CDH1-212ENST00000611625 BCL2L13Q9BXK5 485 aa15.7■□□□□ 0.1
CDH1-212ENST00000611625 COG6Q9Y2V7 657 aa15.7■□□□□ 0.1
CDH1-212ENST00000611625 DAPK1P53355 1430 aa15.7■□□□□ 0.1
CDH1-212ENST00000611625 WASHC2CQ9Y4E1 1318 aa15.7■□□□□ 0.1
CDH1-212ENST00000611625 SOX12O15370 315 aa15.69■□□□□ 0.1
CDH1-212ENST00000611625 NUTM2DQ5VT03 806 aaPredicted RBP15.69■□□□□ 0.1
CDH1-212ENST00000611625 PNISRQ8TF01 805 aaKnown RBP15.69■□□□□ 0.1
CDH1-212ENST00000611625 MLECQ14165 292 aa15.69■□□□□ 0.1
CDH1-212ENST00000611625 GBP4Q96PP9 640 aa15.69■□□□□ 0.1
CDH1-212ENST00000611625 TPRNQ4KMQ1 711 aa15.69■□□□□ 0.1
CDH1-212ENST00000611625 NGEFQ8N5V2 710 aa15.69■□□□□ 0.1
CDH1-212ENST00000611625 CDCA7LQ96GN5 454 aa15.68■□□□□ 0.1
CDH1-212ENST00000611625 TROQ12816 1431 aaPredicted RBP15.68■□□□□ 0.1
CDH1-212ENST00000611625 APBB1O00213 710 aa15.67■□□□□ 0.1
CDH1-212ENST00000611625 HDGFP51858 240 aaKnown RBP15.67■□□□□ 0.1
CDH1-212ENST00000611625 PRG4Q92954 1404 aaPredicted RBP15.67■□□□□ 0.1
CDH1-212ENST00000611625 SMG6Q86US8 1419 aaKnown RBP15.66■□□□□ 0.1
CDH1-212ENST00000611625 EPRSP07814 1512 aaKnown RBP15.66■□□□□ 0.1
CDH1-212ENST00000611625 CC2D2AQ9P2K1 1620 aa15.66■□□□□ 0.1
CDH1-212ENST00000611625 DNTTIP2Q5QJE6 756 aaKnown RBP15.66■□□□□ 0.1
CDH1-212ENST00000611625 ADAMTS8Q9UP79 889 aa15.66■□□□□ 0.1
CDH1-212ENST00000611625 STAC3Q96MF2 364 aa15.65■□□□□ 0.1
CDH1-212ENST00000611625 GSE1Q14687 1217 aa15.65■□□□□ 0.1
CDH1-212ENST00000611625 C9orf84Q5VXU9 1444 aa15.65■□□□□ 0.1
CDH1-212ENST00000611625 NBPF1Q3BBV0 1214 aa15.65■□□□□ 0.1
CDH1-212ENST00000611625 ROCK1Q13464 1354 aa15.64■□□□□ 0.1
CDH1-212ENST00000611625 CDK13Q14004 1512 aaKnown RBP15.64■□□□□ 0.09
CDH1-212ENST00000611625 OS9Q13438 667 aaPredicted RBP15.64■□□□□ 0.09
CDH1-212ENST00000611625 ZKSCAN2Q63HK3 967 aa15.64■□□□□ 0.09
CDH1-212ENST00000611625 RTF1Q92541 710 aaKnown RBP15.64■□□□□ 0.09
CDH1-212ENST00000611625 C11orf95C9JLR9 678 aaPredicted RBP15.63■□□□□ 0.09
CDH1-212ENST00000611625 MCCP23508 829 aa15.63■□□□□ 0.09
CDH1-212ENST00000611625 GOLGA6L3A6NEY3 463 aa15.63■□□□□ 0.09
CDH1-212ENST00000611625 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
CDH1-212ENST00000611625 PTMSP20962 102 aa15.63■□□□□ 0.09
CDH1-212ENST00000611625 PTPN23Q9H3S7 1636 aa15.62■□□□□ 0.09
CDH1-212ENST00000611625 EVC2Q86UK5 1308 aa15.62■□□□□ 0.09
CDH1-212ENST00000611625 ANKRD30BQ9BXX2 1392 aa15.62■□□□□ 0.09
CDH1-212ENST00000611625 CUL7Q14999 1698 aa15.61■□□□□ 0.09
CDH1-212ENST00000611625 UNC13AQ9UPW8 1703 aa15.61■□□□□ 0.09
CDH1-212ENST00000611625 PLCB2Q00722 1185 aa15.6■□□□□ 0.09
CDH1-212ENST00000611625 VGFO15240 615 aaPredicted RBP15.6■□□□□ 0.09
CDH1-212ENST00000611625 MSNP26038 577 aaKnown RBP15.59■□□□□ 0.09
CDH1-212ENST00000611625 KCNJ4P48050 445 aa15.59■□□□□ 0.09
CDH1-212ENST00000611625 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
CDH1-212ENST00000611625 PPP2R1AP30153 589 aa15.59■□□□□ 0.09
CDH1-212ENST00000611625 PAK3O75914 559 aaPredicted RBP15.58■□□□□ 0.09
CDH1-212ENST00000611625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.58■□□□□ 0.09
CDH1-212ENST00000611625 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.08
CDH1-212ENST00000611625 RUNDC1Q96C34 613 aa15.58■□□□□ 0.08
CDH1-212ENST00000611625 LMOD3Q0VAK6 560 aa15.58■□□□□ 0.08
CDH1-212ENST00000611625 LMOD2Q6P5Q4 547 aa15.57■□□□□ 0.08
CDH1-212ENST00000611625 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.57■□□□□ 0.08
CDH1-212ENST00000611625 IFT140Q96RY7 1462 aa15.57■□□□□ 0.08
CDH1-212ENST00000611625 ARHGAP5Q13017 1502 aa15.57■□□□□ 0.08
CDH1-212ENST00000611625 NCOA1Q15788 1441 aa15.56■□□□□ 0.08
CDH1-212ENST00000611625 IQGAP2Q13576 1575 aa15.56■□□□□ 0.08
CDH1-212ENST00000611625 DZIP1LQ8IYY4 767 aaKnown RBP15.55■□□□□ 0.08
CDH1-212ENST00000611625 ZRSR1Q15695 479 aaKnown RBP15.55■□□□□ 0.08
CDH1-212ENST00000611625 ABCC5O15440 1437 aa15.55■□□□□ 0.08
CDH1-212ENST00000611625 PANK1Q8TE04 598 aa15.54■□□□□ 0.08
CDH1-212ENST00000611625 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
CDH1-212ENST00000611625 DDX19BQ9UMR2 479 aa15.54■□□□□ 0.08
CDH1-212ENST00000611625 KIAA0586Q9BVV6 1533 aa15.54■□□□□ 0.08
CDH1-212ENST00000611625 HMMRO75330 724 aa15.54■□□□□ 0.08
CDH1-212ENST00000611625 ELL2O00472 640 aaPredicted RBP15.53■□□□□ 0.08
CDH1-212ENST00000611625 NFKBIBQ15653 356 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms