RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 MYT1LQ9UL68 1186 aa14.24□□□□□ -0.13
FAM228B-205ENST00000611127 AXIN2Q9Y2T1 843 aa14.24□□□□□ -0.13
FAM228B-205ENST00000611127 RSF1Q96T23 1441 aaPredicted RBP14.22□□□□□ -0.13
FAM228B-205ENST00000611127 NESP48681 1621 aa14.22□□□□□ -0.13
FAM228B-205ENST00000611127 E2F4Q16254 413 aa14.2□□□□□ -0.14
FAM228B-205ENST00000611127 ZDHHC16Q969W1 377 aa14.2□□□□□ -0.14
FAM228B-205ENST00000611127 RNF166Q96A37 237 aaPredicted RBP14.19□□□□□ -0.14
FAM228B-205ENST00000611127 CUX2O14529 1486 aa14.18□□□□□ -0.14
FAM228B-205ENST00000611127 WIZO95785 1651 aa14.18□□□□□ -0.14
FAM228B-205ENST00000611127 DPYSL4O14531 572 aa14.18□□□□□ -0.14
FAM228B-205ENST00000611127 ADGRD1Q6QNK2 874 aa14.18□□□□□ -0.14
FAM228B-205ENST00000611127 FBXW7Q969H0 707 aa14.18□□□□□ -0.14
FAM228B-205ENST00000611127 KCNK17Q96T54 332 aa14.18□□□□□ -0.14
FAM228B-205ENST00000611127 ARIH1Q9Y4X5 557 aaPredicted RBP14.18□□□□□ -0.14
FAM228B-205ENST00000611127 PTPREP23469 700 aa14.17□□□□□ -0.14
FAM228B-205ENST00000611127 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
FAM228B-205ENST00000611127 PHF14O94880 888 aa14.16□□□□□ -0.14
FAM228B-205ENST00000611127 PSEN2P49810 448 aa14.16□□□□□ -0.14
FAM228B-205ENST00000611127 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
FAM228B-205ENST00000611127 LAMC3Q9Y6N6 1575 aa14.16□□□□□ -0.14
FAM228B-205ENST00000611127 SLC4A5Q9BY07 1137 aa14.15□□□□□ -0.14
FAM228B-205ENST00000611127 PDS5BQ9NTI5 1447 aa14.15□□□□□ -0.14
FAM228B-205ENST00000611127 PDIA6Q15084 440 aa14.13□□□□□ -0.15
FAM228B-205ENST00000611127 DMRTA1Q5VZB9 504 aa14.13□□□□□ -0.15
FAM228B-205ENST00000611127 TYW1BQ6NUM6 668 aa14.13□□□□□ -0.15
FAM228B-205ENST00000611127 EPAS1Q99814 870 aa14.13□□□□□ -0.15
FAM228B-205ENST00000611127 PCDHGA10Q9Y5H3 936 aa14.13□□□□□ -0.15
FAM228B-205ENST00000611127 ADAM33Q9BZ11 813 aa14.1□□□□□ -0.15
FAM228B-205ENST00000611127 TSHZ2Q9NRE2 1034 aa14.09□□□□□ -0.15
FAM228B-205ENST00000611127 HRO43593 1189 aa14.08□□□□□ -0.16
FAM228B-205ENST00000611127 STAC3Q96MF2 364 aa14.07□□□□□ -0.16
FAM228B-205ENST00000611127 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
FAM228B-205ENST00000611127 VPS9D1Q9Y2B5 631 aa14.06□□□□□ -0.16
FAM228B-205ENST00000611127 PPP1R3GB7ZBB8 358 aa14.05□□□□□ -0.16
FAM228B-205ENST00000611127 SLC24A1O60721 1099 aa14.04□□□□□ -0.16
FAM228B-205ENST00000611127 PLCB2Q00722 1185 aa14.04□□□□□ -0.16
FAM228B-205ENST00000611127 ZBED2Q9BTP6 218 aa14.03□□□□□ -0.16
FAM228B-205ENST00000611127 CFTRP13569 1480 aa14.01□□□□□ -0.17
FAM228B-205ENST00000611127 DDX12PQ92771 950 aa13.99□□□□□ -0.17
FAM228B-205ENST00000611127 THOC2Q8NI27 1593 aaKnown RBP13.99□□□□□ -0.17
FAM228B-205ENST00000611127 ARHGEF1Q92888 912 aaKnown RBP13.98□□□□□ -0.17
FAM228B-205ENST00000611127 NBPF3Q9H094 633 aa13.97□□□□□ -0.17
FAM228B-205ENST00000611127 MRC2Q9UBG0 1479 aa13.96□□□□□ -0.17
FAM228B-205ENST00000611127 C6orf132Q5T0Z8 1188 aa13.96□□□□□ -0.17
FAM228B-205ENST00000611127 P3H3Q8IVL6 736 aa13.96□□□□□ -0.17
FAM228B-205ENST00000611127 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
FAM228B-205ENST00000611127 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
FAM228B-205ENST00000611127 BHMG1C9JSJ3 638 aaPredicted RBP13.95□□□□□ -0.18
FAM228B-205ENST00000611127 EN1Q05925 392 aaPredicted RBP13.95□□□□□ -0.18
FAM228B-205ENST00000611127 NBR1Q14596 966 aa13.95□□□□□ -0.18
FAM228B-205ENST00000611127 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
FAM228B-205ENST00000611127 CEP164Q9UPV0 1460 aa13.94□□□□□ -0.18
FAM228B-205ENST00000611127 ONECUT3O60422 494 aaPredicted RBP13.94□□□□□ -0.18
FAM228B-205ENST00000611127 HCSTQ9UBK5 93 aa13.94□□□□□ -0.18
FAM228B-205ENST00000611127 RABGEF1Q9UJ41 708 aa13.93□□□□□ -0.18
FAM228B-205ENST00000611127 COL9A1P20849 921 aa13.91□□□□□ -0.18
FAM228B-205ENST00000611127 MRPL50Q8N5N7 158 aaKnown RBP13.91□□□□□ -0.18
FAM228B-205ENST00000611127 WDR62O43379 1518 aa13.9□□□□□ -0.18
FAM228B-205ENST00000611127 MAP3K7O43318 606 aa13.9□□□□□ -0.18
FAM228B-205ENST00000611127 CERKQ8TCT0 537 aa13.89□□□□□ -0.19
FAM228B-205ENST00000611127 RBM33Q96EV2 1170 aaKnown RBP13.89□□□□□ -0.19
FAM228B-205ENST00000611127 GOLGA8CPA6NN73 597 aa13.88□□□□□ -0.19
FAM228B-205ENST00000611127 KCNV2Q8TDN2 545 aa13.88□□□□□ -0.19
FAM228B-205ENST00000611127 GRXCR2A6NFK2 248 aa13.86□□□□□ -0.19
FAM228B-205ENST00000611127 LAPTM4BQ86VI4 370 aa13.86□□□□□ -0.19
FAM228B-205ENST00000611127 KCTD12Q96CX2 325 aaKnown RBP13.85□□□□□ -0.19
FAM228B-205ENST00000611127 PROX2Q3B8N5 592 aa13.84□□□□□ -0.19
FAM228B-205ENST00000611127 TRIM6-TRIM34B2RNG4 842 aa13.83□□□□□ -0.2
FAM228B-205ENST00000611127 OSBPP22059 807 aa13.81□□□□□ -0.2
FAM228B-205ENST00000611127 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
FAM228B-205ENST00000611127 TSR1Q2NL82 804 aaKnown RBP13.8□□□□□ -0.2
FAM228B-205ENST00000611127 WNT2BQ93097 391 aa13.8□□□□□ -0.2
FAM228B-205ENST00000611127 KIAA1468Q9P260 1216 aa13.79□□□□□ -0.2
FAM228B-205ENST00000611127 PACS2Q86VP3 889 aa13.78□□□□□ -0.2
FAM228B-205ENST00000611127 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
FAM228B-205ENST00000611127 THSD4Q6ZMP0 1018 aa13.77□□□□□ -0.21
FAM228B-205ENST00000611127 RBM27Q9P2N5 1060 aaKnown RBP13.77□□□□□ -0.21
FAM228B-205ENST00000611127 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
FAM228B-205ENST00000611127 ANKK1Q8NFD2 765 aa13.76□□□□□ -0.21
FAM228B-205ENST00000611127 PRSS12P56730 875 aa13.75□□□□□ -0.21
FAM228B-205ENST00000611127 FAM98CQ17RN3 349 aaKnown RBP13.74□□□□□ -0.21
FAM228B-205ENST00000611127 PRIM1P49642 420 aaKnown RBP13.73□□□□□ -0.21
FAM228B-205ENST00000611127 CDCA7LQ96GN5 454 aa13.73□□□□□ -0.21
FAM228B-205ENST00000611127 ABCC8Q09428 1581 aa13.73□□□□□ -0.21
FAM228B-205ENST00000611127 ZFRQ96KR1 1074 aaKnown RBP13.71□□□□□ -0.21
FAM228B-205ENST00000611127 TSKSQ9UJT2 592 aa13.71□□□□□ -0.21
FAM228B-205ENST00000611127 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
FAM228B-205ENST00000611127 TOPBP1Q92547 1522 aa13.69□□□□□ -0.22
FAM228B-205ENST00000611127 PTPN5P54829 565 aa13.69□□□□□ -0.22
FAM228B-205ENST00000611127 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
FAM228B-205ENST00000611127 NBPF26B4DH59 902 aa13.68□□□□□ -0.22
FAM228B-205ENST00000611127 MLLT3P42568 568 aaPredicted RBP13.67□□□□□ -0.22
FAM228B-205ENST00000611127 NYAP1Q6ZVC0 841 aa13.67□□□□□ -0.22
FAM228B-205ENST00000611127 PLA2G2EQ9NZK7 142 aa13.67□□□□□ -0.22
FAM228B-205ENST00000611127 SOWAHBA6NEL2 793 aa13.66□□□□□ -0.22
FAM228B-205ENST00000611127 CDHR5Q9HBB8 845 aa13.66□□□□□ -0.22
FAM228B-205ENST00000611127 SEPT9Q9UHD8 586 aaPredicted RBP13.66□□□□□ -0.22
FAM228B-205ENST00000611127 VSIG10Q8N0Z9 540 aa13.65□□□□□ -0.22
FAM228B-205ENST00000611127 DNMBPQ6XZF7 1577 aa13.64□□□□□ -0.23
FAM228B-205ENST00000611127 SMYD5Q6GMV2 418 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms