RNA–Protein interactions for RNA: ENST00000608682.1

AP004247.3-201, humanhuman

BASIC

Gene AP004247.3, Length 624 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.3-201ENST00000608682 REPIN1Q9BWE0 567 aaKnown RBP8.38□□□□□ -1.07
AP004247.3-201ENST00000608682 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.38□□□□□ -1.07
AP004247.3-201ENST00000608682 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
AP004247.3-201ENST00000608682 PCDHGA10Q9Y5H3 936 aa8.37□□□□□ -1.07
AP004247.3-201ENST00000608682 MDM2Q00987 491 aaPredicted RBP8.36□□□□□ -1.07
AP004247.3-201ENST00000608682 SLAIN1Q8ND83 568 aa8.36□□□□□ -1.07
AP004247.3-201ENST00000608682 PCDHGA4Q9Y5G9 962 aa8.36□□□□□ -1.07
AP004247.3-201ENST00000608682 FAM161AQ3B820 660 aa8.35□□□□□ -1.07
AP004247.3-201ENST00000608682 TYW1BQ6NUM6 668 aa8.35□□□□□ -1.07
AP004247.3-201ENST00000608682 PHOX2BQ99453 314 aa8.34□□□□□ -1.07
AP004247.3-201ENST00000608682 CLCN1P35523 988 aa8.33□□□□□ -1.08
AP004247.3-201ENST00000608682 PCMTD1Q96MG8 357 aaPredicted RBP8.33□□□□□ -1.08
AP004247.3-201ENST00000608682 NLRP7Q8WX94 980 aa8.32□□□□□ -1.08
AP004247.3-201ENST00000608682 GOPCQ9HD26 462 aa8.32□□□□□ -1.08
AP004247.3-201ENST00000608682 GPCPD1Q9NPB8 672 aa8.32□□□□□ -1.08
AP004247.3-201ENST00000608682 FBXW7Q969H0 707 aa8.31□□□□□ -1.08
AP004247.3-201ENST00000608682 TMUB1Q9BVT8 246 aa8.31□□□□□ -1.08
AP004247.3-201ENST00000608682 ATP1B4Q9UN42 357 aaPredicted RBP8.31□□□□□ -1.08
AP004247.3-201ENST00000608682 SSTR3P32745 418 aaPredicted RBP8.3□□□□□ -1.08
AP004247.3-201ENST00000608682 FLIIQ13045 1269 aa8.3□□□□□ -1.08
AP004247.3-201ENST00000608682 MAMSTRQ6ZN01 415 aa8.3□□□□□ -1.08
AP004247.3-201ENST00000608682 JPH4Q96JJ6 628 aa8.3□□□□□ -1.08
AP004247.3-201ENST00000608682 PADI6Q6TGC4 694 aa8.29□□□□□ -1.08
AP004247.3-201ENST00000608682 ARID3AQ99856 593 aa8.29□□□□□ -1.08
AP004247.3-201ENST00000608682 SCUBE2Q9NQ36 999 aa8.29□□□□□ -1.08
AP004247.3-201ENST00000608682 FOSBP53539 338 aa8.28□□□□□ -1.08
AP004247.3-201ENST00000608682 ZNF454Q8N9F8 522 aa8.28□□□□□ -1.08
AP004247.3-201ENST00000608682 BEGAINQ9BUH8 593 aa8.28□□□□□ -1.08
AP004247.3-201ENST00000608682 SH3D19Q5HYK7 790 aa8.27□□□□□ -1.09
AP004247.3-201ENST00000608682 C6orf132Q5T0Z8 1188 aa8.27□□□□□ -1.09
AP004247.3-201ENST00000608682 METTL3Q86U44 580 aaKnown RBP8.27□□□□□ -1.09
AP004247.3-201ENST00000608682 KHSRPQ92945 711 aaKnown RBP eCLIP8.27□□□□□ -1.09
AP004247.3-201ENST00000608682 KDM4FA0A1W2PPD8 638 aa8.26□□□□□ -1.09
AP004247.3-201ENST00000608682 ARID3CA6NKF2 412 aa8.26□□□□□ -1.09
AP004247.3-201ENST00000608682 OATP04181 439 aa8.26□□□□□ -1.09
AP004247.3-201ENST00000608682 NUDT7P0C024 238 aa8.26□□□□□ -1.09
AP004247.3-201ENST00000608682 UBTFP17480 764 aaKnown RBP8.26□□□□□ -1.09
AP004247.3-201ENST00000608682 ZDHHC16Q969W1 377 aa8.26□□□□□ -1.09
AP004247.3-201ENST00000608682 POTEB2H3BUK9 544 aa8.25□□□□□ -1.09
AP004247.3-201ENST00000608682 ARSIQ5FYB1 569 aa8.25□□□□□ -1.09
AP004247.3-201ENST00000608682 POLR3EQ9NVU0 708 aa8.25□□□□□ -1.09
AP004247.3-201ENST00000608682 ADGRG1Q9Y653 693 aa8.25□□□□□ -1.09
AP004247.3-201ENST00000608682 ONECUT3O60422 494 aaPredicted RBP8.24□□□□□ -1.09
AP004247.3-201ENST00000608682 POTEJP0CG39 1038 aa8.24□□□□□ -1.09
AP004247.3-201ENST00000608682 SKIV2LQ15477 1246 aaKnown RBP8.24□□□□□ -1.09
AP004247.3-201ENST00000608682 PROCA1Q8NCQ7 364 aaPredicted RBP8.24□□□□□ -1.09
AP004247.3-201ENST00000608682 CERKQ8TCT0 537 aa8.24□□□□□ -1.09
AP004247.3-201ENST00000608682 PXYLP1Q8TE99 480 aa8.24□□□□□ -1.09
AP004247.3-201ENST00000608682 ADAM33Q9BZ11 813 aa8.24□□□□□ -1.09
AP004247.3-201ENST00000608682 C1orf115Q9H7X2 142 aa8.24□□□□□ -1.09
AP004247.3-201ENST00000608682 FAM217BQ9NTX9 383 aaPredicted RBP8.24□□□□□ -1.09
AP004247.3-201ENST00000608682 APBB1O00213 710 aa8.23□□□□□ -1.09
AP004247.3-201ENST00000608682 CLUAP1Q96AJ1 413 aa8.23□□□□□ -1.09
AP004247.3-201ENST00000608682 DOK7Q18PE1 504 aa8.21□□□□□ -1.1
AP004247.3-201ENST00000608682 PRSS12P56730 875 aa8.2□□□□□ -1.1
AP004247.3-201ENST00000608682 TTC13Q8NBP0 860 aa8.2□□□□□ -1.1
AP004247.3-201ENST00000608682 CDCA7LQ96GN5 454 aa8.2□□□□□ -1.1
AP004247.3-201ENST00000608682 HOXB3P14651 431 aaPredicted RBP8.19□□□□□ -1.1
AP004247.3-201ENST00000608682 MCM6Q14566 821 aa8.19□□□□□ -1.1
AP004247.3-201ENST00000608682 RBM46Q8TBY0 533 aaKnown RBP8.19□□□□□ -1.1
AP004247.3-201ENST00000608682 RIMBP2O15034 1052 aa8.18□□□□□ -1.1
AP004247.3-201ENST00000608682 MYSM1Q5VVJ2 828 aa8.18□□□□□ -1.1
AP004247.3-201ENST00000608682 RBM27Q9P2N5 1060 aaKnown RBP8.18□□□□□ -1.1
AP004247.3-201ENST00000608682 TBC1D2Q9BYX2 928 aa8.17□□□□□ -1.1
AP004247.3-201ENST00000608682 A6NJR5 290 aa8.16□□□□□ -1.1
AP004247.3-201ENST00000608682 SNPHO15079 494 aa8.16□□□□□ -1.1
AP004247.3-201ENST00000608682 TRAK2O60296 914 aa8.16□□□□□ -1.1
AP004247.3-201ENST00000608682 COL9A1P20849 921 aa8.16□□□□□ -1.1
AP004247.3-201ENST00000608682 CLK2P49760 499 aaKnown RBP8.16□□□□□ -1.1
AP004247.3-201ENST00000608682 GPR153Q6NV75 609 aa8.16□□□□□ -1.1
AP004247.3-201ENST00000608682 ZNF710Q8N1W2 664 aa8.16□□□□□ -1.1
AP004247.3-201ENST00000608682 FAM198AQ9UFP1 575 aa8.16□□□□□ -1.1
AP004247.3-201ENST00000608682 LHX6Q9UPM6 363 aa8.16□□□□□ -1.1
AP004247.3-201ENST00000608682 RCCD1A6NED2 376 aa8.15□□□□□ -1.1
AP004247.3-201ENST00000608682 PPP4R3BQ5MIZ7 849 aa8.14□□□□□ -1.11
AP004247.3-201ENST00000608682 POM121Q96HA1 1249 aa8.14□□□□□ -1.11
AP004247.3-201ENST00000608682 ZSWIM6Q9HCJ5 1215 aa8.14□□□□□ -1.11
AP004247.3-201ENST00000608682 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.13□□□□□ -1.11
AP004247.3-201ENST00000608682 LHX8Q68G74 356 aa8.13□□□□□ -1.11
AP004247.3-201ENST00000608682 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.13□□□□□ -1.11
AP004247.3-201ENST00000608682 RAD21O60216 631 aa8.12□□□□□ -1.11
AP004247.3-201ENST00000608682 NUDT18Q6ZVK8 323 aa8.12□□□□□ -1.11
AP004247.3-201ENST00000608682 EYA1Q99502 592 aa8.12□□□□□ -1.11
AP004247.3-201ENST00000608682 LIMD1Q9UGP4 676 aa8.12□□□□□ -1.11
AP004247.3-201ENST00000608682 TSKSQ9UJT2 592 aa8.12□□□□□ -1.11
AP004247.3-201ENST00000608682 ZNF777Q9ULD5 760 aaPredicted RBP8.12□□□□□ -1.11
AP004247.3-201ENST00000608682 DDX11L8A8MPP1 907 aa8.11□□□□□ -1.11
AP004247.3-201ENST00000608682 C3orf80F5H4A9 247 aa8.11□□□□□ -1.11
AP004247.3-201ENST00000608682 DIXDC1Q155Q3 683 aa8.11□□□□□ -1.11
AP004247.3-201ENST00000608682 FBXO31Q5XUX0 539 aaPredicted RBP8.11□□□□□ -1.11
AP004247.3-201ENST00000608682 RIC3Q7Z5B4 369 aa8.11□□□□□ -1.11
AP004247.3-201ENST00000608682 PROSER2Q86WR7 435 aaPredicted RBP8.11□□□□□ -1.11
AP004247.3-201ENST00000608682 CCDC82Q8N4S0 544 aa8.11□□□□□ -1.11
AP004247.3-201ENST00000608682 SPIRE2Q8WWL2 714 aa8.11□□□□□ -1.11
AP004247.3-201ENST00000608682 PTPREP23469 700 aa8.1□□□□□ -1.11
AP004247.3-201ENST00000608682 RFC5P40937 340 aa8.1□□□□□ -1.11
AP004247.3-201ENST00000608682 CSPP1Q1MSJ5 1256 aa8.1□□□□□ -1.11
AP004247.3-201ENST00000608682 NUTM1Q86Y26 1132 aa8.1□□□□□ -1.11
AP004247.3-201ENST00000608682 OTUD5Q96G74 571 aa8.1□□□□□ -1.11
AP004247.3-201ENST00000608682 BCL2L12Q9HB09 334 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms