RNA–Protein interactions for RNA: ENST00000607339.1

UCHL3-205, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-205ENST00000607339 DPYSL4O14531 572 aa12.31□□□□□ -0.44
UCHL3-205ENST00000607339 MRPL50Q8N5N7 158 aaKnown RBP12.31□□□□□ -0.44
UCHL3-205ENST00000607339 KCTD12Q96CX2 325 aaKnown RBP12.3□□□□□ -0.44
UCHL3-205ENST00000607339 E2F4Q16254 413 aa12.27□□□□□ -0.45
UCHL3-205ENST00000607339 ONECUT3O60422 494 aaPredicted RBP12.26□□□□□ -0.45
UCHL3-205ENST00000607339 PDIA6Q15084 440 aa12.26□□□□□ -0.45
UCHL3-205ENST00000607339 RABGEF1Q9UJ41 708 aa12.26□□□□□ -0.45
UCHL3-205ENST00000607339 BHMG1C9JSJ3 638 aaPredicted RBP12.25□□□□□ -0.45
UCHL3-205ENST00000607339 PLA2G2EQ9NZK7 142 aa12.25□□□□□ -0.45
UCHL3-205ENST00000607339 ARIH1Q9Y4X5 557 aaPredicted RBP12.24□□□□□ -0.45
UCHL3-205ENST00000607339 LAPTM4BQ86VI4 370 aa12.23□□□□□ -0.45
UCHL3-205ENST00000607339 WNT2BQ93097 391 aa12.22□□□□□ -0.45
UCHL3-205ENST00000607339 C6orf132Q5T0Z8 1188 aa12.2□□□□□ -0.46
UCHL3-205ENST00000607339 THSD4Q6ZMP0 1018 aa12.2□□□□□ -0.46
UCHL3-205ENST00000607339 ANKK1Q8NFD2 765 aa12.19□□□□□ -0.46
UCHL3-205ENST00000607339 NBR1Q14596 966 aa12.18□□□□□ -0.46
UCHL3-205ENST00000607339 DDX12PQ92771 950 aa12.17□□□□□ -0.46
UCHL3-205ENST00000607339 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
UCHL3-205ENST00000607339 CERKQ8TCT0 537 aa12.16□□□□□ -0.46
UCHL3-205ENST00000607339 MAP3K7O43318 606 aa12.15□□□□□ -0.46
UCHL3-205ENST00000607339 COL9A1P20849 921 aa12.15□□□□□ -0.46
UCHL3-205ENST00000607339 PTPN5P54829 565 aa12.15□□□□□ -0.46
UCHL3-205ENST00000607339 NYAP1Q6ZVC0 841 aa12.14□□□□□ -0.47
UCHL3-205ENST00000607339 TRIM6-TRIM34B2RNG4 842 aa12.13□□□□□ -0.47
UCHL3-205ENST00000607339 PROX2Q3B8N5 592 aa12.13□□□□□ -0.47
UCHL3-205ENST00000607339 RBM33Q96EV2 1170 aaKnown RBP12.13□□□□□ -0.47
UCHL3-205ENST00000607339 IFFO2Q5TF58 517 aa12.11□□□□□ -0.47
UCHL3-205ENST00000607339 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
UCHL3-205ENST00000607339 KIAA1468Q9P260 1216 aa12.11□□□□□ -0.47
UCHL3-205ENST00000607339 FAM98CQ17RN3 349 aaKnown RBP12.08□□□□□ -0.48
UCHL3-205ENST00000607339 ZFRQ96KR1 1074 aaKnown RBP12.06□□□□□ -0.48
UCHL3-205ENST00000607339 SOWAHBA6NEL2 793 aa12.05□□□□□ -0.48
UCHL3-205ENST00000607339 GRXCR2A6NFK2 248 aa12.04□□□□□ -0.48
UCHL3-205ENST00000607339 RGS20O76081 388 aa12.04□□□□□ -0.48
UCHL3-205ENST00000607339 RBM27Q9P2N5 1060 aaKnown RBP12.04□□□□□ -0.48
UCHL3-205ENST00000607339 P3H3Q8IVL6 736 aa12.03□□□□□ -0.48
UCHL3-205ENST00000607339 ARHGEF1Q92888 912 aaKnown RBP12.03□□□□□ -0.48
UCHL3-205ENST00000607339 NBPF26B4DH59 902 aa12.02□□□□□ -0.49
UCHL3-205ENST00000607339 LRCH3Q96II8 777 aa12.02□□□□□ -0.49
UCHL3-205ENST00000607339 TSR1Q2NL82 804 aaKnown RBP12.01□□□□□ -0.49
UCHL3-205ENST00000607339 PRSS12P56730 875 aa12□□□□□ -0.49
UCHL3-205ENST00000607339 CDKN2AIPQ9NXV6 580 aaPredicted RBP12□□□□□ -0.49
UCHL3-205ENST00000607339 SEPT9Q9UHD8 586 aaPredicted RBP12□□□□□ -0.49
UCHL3-205ENST00000607339 CDCA7LQ96GN5 454 aa11.99□□□□□ -0.49
UCHL3-205ENST00000607339 NECTIN2Q92692 538 aa11.98□□□□□ -0.49
UCHL3-205ENST00000607339 BCAMP50895 628 aa11.97□□□□□ -0.49
UCHL3-205ENST00000607339 TSR3Q9UJK0 312 aaKnown RBP11.97□□□□□ -0.49
UCHL3-205ENST00000607339 HDGFP51858 240 aaKnown RBP11.96□□□□□ -0.49
UCHL3-205ENST00000607339 ITGBL1O95965 494 aaPredicted RBP11.95□□□□□ -0.5
UCHL3-205ENST00000607339 OSBPP22059 807 aa11.95□□□□□ -0.5
UCHL3-205ENST00000607339 TSKSQ9UJT2 592 aa11.95□□□□□ -0.5
UCHL3-205ENST00000607339 SLC4A3P48751 1232 aa11.94□□□□□ -0.5
UCHL3-205ENST00000607339 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
UCHL3-205ENST00000607339 A0A0G2JS52 829 aa11.92□□□□□ -0.5
UCHL3-205ENST00000607339 HPS5Q9UPZ3 1129 aa11.92□□□□□ -0.5
UCHL3-205ENST00000607339 PPP4CP60510 307 aa11.89□□□□□ -0.51
UCHL3-205ENST00000607339 TATDN2Q93075 761 aa11.89□□□□□ -0.51
UCHL3-205ENST00000607339 WBP1LQ9NX94 342 aa11.89□□□□□ -0.51
UCHL3-205ENST00000607339 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
UCHL3-205ENST00000607339 KCNC4Q03721 635 aa11.88□□□□□ -0.51
UCHL3-205ENST00000607339 KCNV2Q8TDN2 545 aa11.88□□□□□ -0.51
UCHL3-205ENST00000607339 CDHR5Q9HBB8 845 aa11.85□□□□□ -0.51
UCHL3-205ENST00000607339 PRIM1P49642 420 aaKnown RBP11.84□□□□□ -0.51
UCHL3-205ENST00000607339 SAMD7Q7Z3H4 446 aa11.84□□□□□ -0.51
UCHL3-205ENST00000607339 NUDT18Q6ZVK8 323 aa11.83□□□□□ -0.52
UCHL3-205ENST00000607339 PLCB2Q00722 1185 aa11.82□□□□□ -0.52
UCHL3-205ENST00000607339 SLF2Q8IX21 1173 aa11.82□□□□□ -0.52
UCHL3-205ENST00000607339 TTC13Q8NBP0 860 aa11.82□□□□□ -0.52
UCHL3-205ENST00000607339 SMAPO00193 183 aa11.8□□□□□ -0.52
UCHL3-205ENST00000607339 PADI6Q6TGC4 694 aa11.8□□□□□ -0.52
UCHL3-205ENST00000607339 PRR14Q9BWN1 585 aa11.8□□□□□ -0.52
UCHL3-205ENST00000607339 FAM198AQ9UFP1 575 aa11.8□□□□□ -0.52
UCHL3-205ENST00000607339 RNF40O75150 1001 aa11.78□□□□□ -0.52
UCHL3-205ENST00000607339 SMYD5Q6GMV2 418 aa11.78□□□□□ -0.52
UCHL3-205ENST00000607339 IRX2Q9BZI1 471 aaPredicted RBP11.78□□□□□ -0.52
UCHL3-205ENST00000607339 NPDC1Q9NQX5 325 aaPredicted RBP11.77□□□□□ -0.53
UCHL3-205ENST00000607339 MLLT3P42568 568 aaPredicted RBP11.76□□□□□ -0.53
UCHL3-205ENST00000607339 RBM46Q8TBY0 533 aaKnown RBP11.75□□□□□ -0.53
UCHL3-205ENST00000607339 PTGDRQ13258 359 aa11.74□□□□□ -0.53
UCHL3-205ENST00000607339 IL21Q9HBE4 155 aa11.74□□□□□ -0.53
UCHL3-205ENST00000607339 FCHSD2O94868 740 aa11.73□□□□□ -0.53
UCHL3-205ENST00000607339 NUTM2FA1L443 756 aa11.72□□□□□ -0.53
UCHL3-205ENST00000607339 DNAJB2P25686 324 aa11.72□□□□□ -0.53
UCHL3-205ENST00000607339 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
UCHL3-205ENST00000607339 EYA1Q99502 592 aa11.7□□□□□ -0.54
UCHL3-205ENST00000607339 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
UCHL3-205ENST00000607339 MTRQ99707 1265 aa11.68□□□□□ -0.54
UCHL3-205ENST00000607339 C3orf80F5H4A9 247 aa11.67□□□□□ -0.54
UCHL3-205ENST00000607339 GGCXP38435 758 aa11.67□□□□□ -0.54
UCHL3-205ENST00000607339 SEMA3EO15041 775 aa11.64□□□□□ -0.55
UCHL3-205ENST00000607339 OATP04181 439 aa11.64□□□□□ -0.55
UCHL3-205ENST00000607339 HIC1Q14526 733 aa11.64□□□□□ -0.55
UCHL3-205ENST00000607339 ADGRG1Q9Y653 693 aa11.64□□□□□ -0.55
UCHL3-205ENST00000607339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.63□□□□□ -0.55
UCHL3-205ENST00000607339 APLP1P51693 650 aa11.63□□□□□ -0.55
UCHL3-205ENST00000607339 LAPTM4AQ15012 233 aa11.63□□□□□ -0.55
UCHL3-205ENST00000607339 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
UCHL3-205ENST00000607339 RSPH4AQ5TD94 716 aa11.63□□□□□ -0.55
UCHL3-205ENST00000607339 TMEM134Q9H6X4 195 aa11.63□□□□□ -0.55
UCHL3-205ENST00000607339 TESPA1A2RU30 521 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms