RNA–Protein interactions for RNA: ENST00000607016.1

NUDT3-201, Transcript of nudix hydrolase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDT3, Length 9,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDT3-201ENST00000607016 MNS1Q8NEH6 495 aa16.66■□□□□ 0.26
NUDT3-201ENST00000607016 HSP90B2PQ58FF3 399 aa16.66■□□□□ 0.26
NUDT3-201ENST00000607016 MTERF4Q7Z6M4 381 aaKnown RBP16.66■□□□□ 0.26
NUDT3-201ENST00000607016 TPM1P09493 284 aa16.66■□□□□ 0.26
NUDT3-201ENST00000607016 NASPP49321 788 aaPredicted RBP16.66■□□□□ 0.26
NUDT3-201ENST00000607016 ERICH4A6NGS2 130 aa16.65■□□□□ 0.26
NUDT3-201ENST00000607016 HSPA5P11021 654 aaKnown RBP16.65■□□□□ 0.26
NUDT3-201ENST00000607016 PLIN1O60240 522 aa16.65■□□□□ 0.26
NUDT3-201ENST00000607016 MCTP1Q6DN14 999 aa16.65■□□□□ 0.26
NUDT3-201ENST00000607016 GORABQ5T7V8 394 aa16.65■□□□□ 0.26
NUDT3-201ENST00000607016 MORC1Q86VD1 984 aa16.65■□□□□ 0.26
NUDT3-201ENST00000607016 PRDM10Q9NQV6 1147 aa16.64■□□□□ 0.25
NUDT3-201ENST00000607016 RBM25P49756 843 aaKnown RBP16.64■□□□□ 0.25
NUDT3-201ENST00000607016 NFKBIBQ15653 356 aa16.64■□□□□ 0.25
NUDT3-201ENST00000607016 GPATCH3Q96I76 525 aa16.64■□□□□ 0.25
NUDT3-201ENST00000607016 SMC4Q9NTJ3 1288 aa16.64■□□□□ 0.25
NUDT3-201ENST00000607016 POGKQ9P215 609 aa16.63■□□□□ 0.25
NUDT3-201ENST00000607016 CCDC146Q8IYE0 955 aa16.63■□□□□ 0.25
NUDT3-201ENST00000607016 TSPYL1Q9H0U9 437 aa16.62■□□□□ 0.25
NUDT3-201ENST00000607016 PCMTD1Q96MG8 357 aaPredicted RBP16.62■□□□□ 0.25
NUDT3-201ENST00000607016 TMF1P82094 1093 aa16.6■□□□□ 0.25
NUDT3-201ENST00000607016 VPS53Q5VIR6 699 aa16.6■□□□□ 0.25
NUDT3-201ENST00000607016 LEKR1Q6ZMV7 388 aa16.6■□□□□ 0.25
NUDT3-201ENST00000607016 ACBD3Q9H3P7 528 aa16.6■□□□□ 0.25
NUDT3-201ENST00000607016 CCDC39Q9UFE4 941 aa16.6■□□□□ 0.25
NUDT3-201ENST00000607016 TTLL5Q6EMB2 1281 aa16.58■□□□□ 0.25
NUDT3-201ENST00000607016 MEX3CQ5U5Q3 659 aaKnown RBP16.58■□□□□ 0.25
NUDT3-201ENST00000607016 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.24
NUDT3-201ENST00000607016 RNF214Q8ND24 703 aa16.58■□□□□ 0.24
NUDT3-201ENST00000607016 KIF3AQ9Y496 699 aa16.58■□□□□ 0.24
NUDT3-201ENST00000607016 DCAF11Q8TEB1 546 aa16.58■□□□□ 0.24
NUDT3-201ENST00000607016 NAP1L1P55209 391 aaKnown RBP16.57■□□□□ 0.24
NUDT3-201ENST00000607016 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
NUDT3-201ENST00000607016 RTF1Q92541 710 aaKnown RBP16.57■□□□□ 0.24
NUDT3-201ENST00000607016 RILPL2Q969X0 211 aa16.57■□□□□ 0.24
NUDT3-201ENST00000607016 CCDC9Q9Y3X0 531 aaKnown RBP16.57■□□□□ 0.24
NUDT3-201ENST00000607016 HMMRO75330 724 aa16.56■□□□□ 0.24
NUDT3-201ENST00000607016 EXOC6Q8TAG9 804 aa16.56■□□□□ 0.24
NUDT3-201ENST00000607016 SLC4A10Q6U841 1118 aa16.56■□□□□ 0.24
NUDT3-201ENST00000607016 UQCRHLA0A096LP55 91 aa16.56■□□□□ 0.24
NUDT3-201ENST00000607016 UQCRHP07919 91 aa16.56■□□□□ 0.24
NUDT3-201ENST00000607016 FOSBP53539 338 aa16.56■□□□□ 0.24
NUDT3-201ENST00000607016 ATP6V1DQ9Y5K8 247 aa16.56■□□□□ 0.24
NUDT3-201ENST00000607016 IPO7O95373 1038 aaKnown RBP16.56■□□□□ 0.24
NUDT3-201ENST00000607016 RRP9O43818 475 aaKnown RBP16.56■□□□□ 0.24
NUDT3-201ENST00000607016 CENPQQ7L2Z9 268 aaPredicted RBP16.56■□□□□ 0.24
NUDT3-201ENST00000607016 FAM184AQ8NB25 1140 aa16.56■□□□□ 0.24
NUDT3-201ENST00000607016 GOLGA3Q08378 1498 aa16.55■□□□□ 0.24
NUDT3-201ENST00000607016 EEA1Q15075 1411 aa16.55■□□□□ 0.24
NUDT3-201ENST00000607016 ZNF330Q9Y3S2 320 aaPredicted RBP16.55■□□□□ 0.24
NUDT3-201ENST00000607016 CENPJQ9HC77 1338 aaPredicted RBP16.55■□□□□ 0.24
NUDT3-201ENST00000607016 TOMM22Q9NS69 142 aa16.55■□□□□ 0.24
NUDT3-201ENST00000607016 U2AF1L5P0DN76 240 aaPredicted RBP16.55■□□□□ 0.24
NUDT3-201ENST00000607016 U2AF1Q01081 240 aaKnown RBP eCLIP16.55■□□□□ 0.24
NUDT3-201ENST00000607016 ZNF526Q8TF50 670 aaPredicted RBP16.54■□□□□ 0.24
NUDT3-201ENST00000607016 CAGE1Q8TC20 777 aa16.54■□□□□ 0.24
NUDT3-201ENST00000607016 BICD2Q8TD16 824 aa16.54■□□□□ 0.24
NUDT3-201ENST00000607016 AXDND1Q5T1B0 1012 aaPredicted RBP16.54■□□□□ 0.24
NUDT3-201ENST00000607016 CRBNQ96SW2 442 aa16.54■□□□□ 0.24
NUDT3-201ENST00000607016 DCTN1Q14203 1278 aa16.53■□□□□ 0.24
NUDT3-201ENST00000607016 MPNDQ8N594 471 aa16.52■□□□□ 0.24
NUDT3-201ENST00000607016 ABCC9O60706 1549 aa16.52■□□□□ 0.24
NUDT3-201ENST00000607016 RSF1Q96T23 1441 aaPredicted RBP16.52■□□□□ 0.24
NUDT3-201ENST00000607016 ANKRD45Q5TZF3 282 aa16.52■□□□□ 0.23
NUDT3-201ENST00000607016 STK11IPQ8N1F8 1099 aa16.52■□□□□ 0.23
NUDT3-201ENST00000607016 MRE11P49959 708 aa16.52■□□□□ 0.23
NUDT3-201ENST00000607016 PDILTQ8N807 584 aa16.51■□□□□ 0.23
NUDT3-201ENST00000607016 MARCH6O60337 910 aa16.51■□□□□ 0.23
NUDT3-201ENST00000607016 SRPK2P78362 688 aaKnown RBP16.51■□□□□ 0.23
NUDT3-201ENST00000607016 CDR1P51861 262 aa16.51■□□□□ 0.23
NUDT3-201ENST00000607016 IBSPP21815 317 aaPredicted RBP16.5■□□□□ 0.23
NUDT3-201ENST00000607016 FOXD1Q16676 465 aa16.5■□□□□ 0.23
NUDT3-201ENST00000607016 DEF6Q9H4E7 631 aa16.5■□□□□ 0.23
NUDT3-201ENST00000607016 GPATCH11Q8N954 259 aa16.5■□□□□ 0.23
NUDT3-201ENST00000607016 BCL2L13Q9BXK5 485 aa16.49■□□□□ 0.23
NUDT3-201ENST00000607016 CENPHQ9H3R5 247 aa16.49■□□□□ 0.23
NUDT3-201ENST00000607016 SPC24Q8NBT2 197 aa16.49■□□□□ 0.23
NUDT3-201ENST00000607016 CHMP5Q9NZZ3 219 aa16.49■□□□□ 0.23
NUDT3-201ENST00000607016 ZHX1Q9UKY1 873 aaPredicted RBP16.49■□□□□ 0.23
NUDT3-201ENST00000607016 SASS6Q6UVJ0 657 aa16.49■□□□□ 0.23
NUDT3-201ENST00000607016 DYDC1Q8WWB3 177 aa16.49■□□□□ 0.23
NUDT3-201ENST00000607016 E9PSI1 815 aa16.48■□□□□ 0.23
NUDT3-201ENST00000607016 TAF3Q5VWG9 929 aa16.48■□□□□ 0.23
NUDT3-201ENST00000607016 CHMP4AQ9BY43 222 aa16.48■□□□□ 0.23
NUDT3-201ENST00000607016 KIAA0754O94854 1291 aa16.48■□□□□ 0.23
NUDT3-201ENST00000607016 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
NUDT3-201ENST00000607016 CAVIN1Q6NZI2 390 aaKnown RBP16.48■□□□□ 0.23
NUDT3-201ENST00000607016 RRP1P56182 461 aaKnown RBP16.47■□□□□ 0.23
NUDT3-201ENST00000607016 VPS37CA5D8V6 355 aaPredicted RBP16.47■□□□□ 0.23
NUDT3-201ENST00000607016 FRAT2O75474 233 aaPredicted RBP16.47■□□□□ 0.23
NUDT3-201ENST00000607016 TNNT1P13805 278 aa16.46■□□□□ 0.23
NUDT3-201ENST00000607016 TRERF1Q96PN7 1200 aa16.46■□□□□ 0.23
NUDT3-201ENST00000607016 RRP7AQ9Y3A4 280 aaKnown RBP16.45■□□□□ 0.22
NUDT3-201ENST00000607016 RALBP1Q15311 655 aa16.45■□□□□ 0.22
NUDT3-201ENST00000607016 ANKRD20A12PQ8NF67 263 aa16.45■□□□□ 0.22
NUDT3-201ENST00000607016 ROCK2O75116 1388 aaKnown RBP16.44■□□□□ 0.22
NUDT3-201ENST00000607016 CT47B1P0C2W7 299 aaPredicted RBP16.44■□□□□ 0.22
NUDT3-201ENST00000607016 TRAK2O60296 914 aa16.44■□□□□ 0.22
NUDT3-201ENST00000607016 CGNQ9P2M7 1197 aaKnown RBP16.43■□□□□ 0.22
NUDT3-201ENST00000607016 TRIM5Q9C035 493 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms