RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 NBPF3Q9H094 633 aa10.57□□□□□ -0.72
LSM1P2-201ENST00000604911 PROX2Q3B8N5 592 aa10.56□□□□□ -0.72
LSM1P2-201ENST00000604911 WNT2BQ93097 391 aa10.56□□□□□ -0.72
LSM1P2-201ENST00000604911 RABGEF1Q9UJ41 708 aa10.56□□□□□ -0.72
LSM1P2-201ENST00000604911 EPAS1Q99814 870 aa10.55□□□□□ -0.72
LSM1P2-201ENST00000604911 GOLGA8CPA6NN73 597 aa10.53□□□□□ -0.72
LSM1P2-201ENST00000604911 IFFO2Q5TF58 517 aa10.53□□□□□ -0.72
LSM1P2-201ENST00000604911 C6orf132Q5T0Z8 1188 aa10.52□□□□□ -0.73
LSM1P2-201ENST00000604911 SPRYD3Q8NCJ5 442 aa10.52□□□□□ -0.73
LSM1P2-201ENST00000604911 AMER1Q5JTC6 1135 aaPredicted RBP10.51□□□□□ -0.73
LSM1P2-201ENST00000604911 ONECUT3O60422 494 aaPredicted RBP10.5□□□□□ -0.73
LSM1P2-201ENST00000604911 PDIA6Q15084 440 aa10.49□□□□□ -0.73
LSM1P2-201ENST00000604911 LAPTM4BQ86VI4 370 aa10.49□□□□□ -0.73
LSM1P2-201ENST00000604911 DDX12PQ92771 950 aa10.48□□□□□ -0.73
LSM1P2-201ENST00000604911 KIAA1468Q9P260 1216 aa10.48□□□□□ -0.73
LSM1P2-201ENST00000604911 RTN4Q9NQC3 1192 aaKnown RBP10.46□□□□□ -0.73
LSM1P2-201ENST00000604911 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.46□□□□□ -0.73
LSM1P2-201ENST00000604911 ANKK1Q8NFD2 765 aa10.45□□□□□ -0.74
LSM1P2-201ENST00000604911 ARIH1Q9Y4X5 557 aaPredicted RBP10.45□□□□□ -0.74
LSM1P2-201ENST00000604911 TRIM6-TRIM34B2RNG4 842 aa10.44□□□□□ -0.74
LSM1P2-201ENST00000604911 EN1Q05925 392 aaPredicted RBP10.44□□□□□ -0.74
LSM1P2-201ENST00000604911 RBM33Q96EV2 1170 aaKnown RBP10.44□□□□□ -0.74
LSM1P2-201ENST00000604911 SOWAHBA6NEL2 793 aa10.43□□□□□ -0.74
LSM1P2-201ENST00000604911 SPDYE16A6NNV3 312 aaPredicted RBP10.43□□□□□ -0.74
LSM1P2-201ENST00000604911 ZFRQ96KR1 1074 aaKnown RBP10.43□□□□□ -0.74
LSM1P2-201ENST00000604911 BCAMP50895 628 aa10.42□□□□□ -0.74
LSM1P2-201ENST00000604911 NBR1Q14596 966 aa10.41□□□□□ -0.74
LSM1P2-201ENST00000604911 E2F4Q16254 413 aa10.41□□□□□ -0.74
LSM1P2-201ENST00000604911 TSR1Q2NL82 804 aaKnown RBP10.41□□□□□ -0.74
LSM1P2-201ENST00000604911 A0A0G2JS52 829 aa10.4□□□□□ -0.74
LSM1P2-201ENST00000604911 RGS20O76081 388 aa10.4□□□□□ -0.74
LSM1P2-201ENST00000604911 SEPT9Q9UHD8 586 aaPredicted RBP10.4□□□□□ -0.74
LSM1P2-201ENST00000604911 ITGBL1O95965 494 aaPredicted RBP10.39□□□□□ -0.75
LSM1P2-201ENST00000604911 FAM98CQ17RN3 349 aaKnown RBP10.39□□□□□ -0.75
LSM1P2-201ENST00000604911 PAXIP1Q6ZW49 1069 aaPredicted RBP10.39□□□□□ -0.75
LSM1P2-201ENST00000604911 PRIM1P49642 420 aaKnown RBP10.38□□□□□ -0.75
LSM1P2-201ENST00000604911 TSKSQ9UJT2 592 aa10.38□□□□□ -0.75
LSM1P2-201ENST00000604911 MAP3K7O43318 606 aa10.37□□□□□ -0.75
LSM1P2-201ENST00000604911 NYAP1Q6ZVC0 841 aa10.37□□□□□ -0.75
LSM1P2-201ENST00000604911 CFAP44Q96MT7 982 aa10.37□□□□□ -0.75
LSM1P2-201ENST00000604911 WBP1LQ9NX94 342 aa10.35□□□□□ -0.75
LSM1P2-201ENST00000604911 PACS2Q86VP3 889 aa10.33□□□□□ -0.76
LSM1P2-201ENST00000604911 WDR70Q9NW82 654 aa10.33□□□□□ -0.76
LSM1P2-201ENST00000604911 FAM198AQ9UFP1 575 aa10.32□□□□□ -0.76
LSM1P2-201ENST00000604911 OSBPP22059 807 aa10.31□□□□□ -0.76
LSM1P2-201ENST00000604911 PRSS12P56730 875 aa10.31□□□□□ -0.76
LSM1P2-201ENST00000604911 CERKQ8TCT0 537 aa10.31□□□□□ -0.76
LSM1P2-201ENST00000604911 CDCA7LQ96GN5 454 aa10.31□□□□□ -0.76
LSM1P2-201ENST00000604911 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.31□□□□□ -0.76
LSM1P2-201ENST00000604911 TSR3Q9UJK0 312 aaKnown RBP10.31□□□□□ -0.76
LSM1P2-201ENST00000604911 LRCH3Q96II8 777 aa10.3□□□□□ -0.76
LSM1P2-201ENST00000604911 GRXCR2A6NFK2 248 aa10.29□□□□□ -0.76
LSM1P2-201ENST00000604911 C3orf80F5H4A9 247 aa10.28□□□□□ -0.76
LSM1P2-201ENST00000604911 HPS5Q9UPZ3 1129 aa10.28□□□□□ -0.76
LSM1P2-201ENST00000604911 CDHR5Q9HBB8 845 aa10.27□□□□□ -0.77
LSM1P2-201ENST00000604911 SMAPO00193 183 aa10.25□□□□□ -0.77
LSM1P2-201ENST00000604911 KCNC4Q03721 635 aa10.25□□□□□ -0.77
LSM1P2-201ENST00000604911 RBM27Q9P2N5 1060 aaKnown RBP10.25□□□□□ -0.77
LSM1P2-201ENST00000604911 TATDN2Q93075 761 aa10.24□□□□□ -0.77
LSM1P2-201ENST00000604911 SAMD7Q7Z3H4 446 aa10.23□□□□□ -0.77
LSM1P2-201ENST00000604911 NBPF26B4DH59 902 aa10.22□□□□□ -0.77
LSM1P2-201ENST00000604911 TTC13Q8NBP0 860 aa10.22□□□□□ -0.77
LSM1P2-201ENST00000604911 NPDC1Q9NQX5 325 aaPredicted RBP10.22□□□□□ -0.77
LSM1P2-201ENST00000604911 ERICH6Q7L0X2 663 aa10.21□□□□□ -0.77
LSM1P2-201ENST00000604911 PNMA3Q9UL41 463 aa10.21□□□□□ -0.77
LSM1P2-201ENST00000604911 PPP4CP60510 307 aa10.2□□□□□ -0.78
LSM1P2-201ENST00000604911 IRX2Q9BZI1 471 aaPredicted RBP10.2□□□□□ -0.78
LSM1P2-201ENST00000604911 NUDT18Q6ZVK8 323 aa10.18□□□□□ -0.78
LSM1P2-201ENST00000604911 TSHZ2Q9NRE2 1034 aa10.18□□□□□ -0.78
LSM1P2-201ENST00000604911 DAXXQ9UER7 740 aaPredicted RBP10.18□□□□□ -0.78
LSM1P2-201ENST00000604911 TJAP1Q5JTD0 557 aa10.17□□□□□ -0.78
LSM1P2-201ENST00000604911 ARHGEF1Q92888 912 aaKnown RBP10.17□□□□□ -0.78
LSM1P2-201ENST00000604911 PADI6Q6TGC4 694 aa10.15□□□□□ -0.78
LSM1P2-201ENST00000604911 KCNV2Q8TDN2 545 aa10.14□□□□□ -0.79
LSM1P2-201ENST00000604911 MLLT3P42568 568 aaPredicted RBP10.13□□□□□ -0.79
LSM1P2-201ENST00000604911 MTRQ99707 1265 aa10.12□□□□□ -0.79
LSM1P2-201ENST00000604911 APLP1P51693 650 aa10.11□□□□□ -0.79
LSM1P2-201ENST00000604911 EYA1Q99502 592 aa10.11□□□□□ -0.79
LSM1P2-201ENST00000604911 IL21Q9HBE4 155 aa10.1□□□□□ -0.79
LSM1P2-201ENST00000604911 HDGFP51858 240 aaKnown RBP10.09□□□□□ -0.79
LSM1P2-201ENST00000604911 SWT1Q5T5J6 900 aaKnown RBP10.08□□□□□ -0.8
LSM1P2-201ENST00000604911 PTGDRQ13258 359 aa10.07□□□□□ -0.8
LSM1P2-201ENST00000604911 RNF40O75150 1001 aa10.06□□□□□ -0.8
LSM1P2-201ENST00000604911 SLF2Q8IX21 1173 aa10.06□□□□□ -0.8
LSM1P2-201ENST00000604911 ZNF516Q92618 1163 aa10.06□□□□□ -0.8
LSM1P2-201ENST00000604911 NECTIN2Q92692 538 aa10.06□□□□□ -0.8
LSM1P2-201ENST00000604911 PPP1R18Q6NYC8 613 aa10.04□□□□□ -0.8
LSM1P2-201ENST00000604911 NKX2-3Q8TAU0 364 aa10□□□□□ -0.81
LSM1P2-201ENST00000604911 ADGRG1Q9Y653 693 aa10□□□□□ -0.81
LSM1P2-201ENST00000604911 P3H3Q8IVL6 736 aa9.99□□□□□ -0.81
LSM1P2-201ENST00000604911 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.99□□□□□ -0.81
LSM1P2-201ENST00000604911 PRKCSHP14314 528 aaPredicted RBP9.98□□□□□ -0.81
LSM1P2-201ENST00000604911 DNAJB2P25686 324 aa9.98□□□□□ -0.81
LSM1P2-201ENST00000604911 LAPTM4AQ15012 233 aa9.98□□□□□ -0.81
LSM1P2-201ENST00000604911 Q6ZNB5 142 aa9.98□□□□□ -0.81
LSM1P2-201ENST00000604911 PRKD2Q9BZL6 878 aa9.98□□□□□ -0.81
LSM1P2-201ENST00000604911 TMEM134Q9H6X4 195 aa9.98□□□□□ -0.81
LSM1P2-201ENST00000604911 V9GY48 417 aaPredicted RBP9.98□□□□□ -0.81
LSM1P2-201ENST00000604911 COPS2P61201 443 aa9.97□□□□□ -0.81
LSM1P2-201ENST00000604911 LCE2BO14633 110 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms