RNA–Protein interactions for RNA: ENST00000603044.5

FOCAD-203, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-203ENST00000603044 MLLT3P42568 568 aaPredicted RBP16.28■□□□□ 0.2
FOCAD-203ENST00000603044 EN1Q05925 392 aaPredicted RBP16.27■□□□□ 0.2
FOCAD-203ENST00000603044 ARHGAP33O14559 1287 aa16.26■□□□□ 0.19
FOCAD-203ENST00000603044 NBR1Q14596 966 aa16.26■□□□□ 0.19
FOCAD-203ENST00000603044 ZCCHC6Q5VYS8 1495 aaKnown RBP16.26■□□□□ 0.19
FOCAD-203ENST00000603044 GRXCR2A6NFK2 248 aa16.25■□□□□ 0.19
FOCAD-203ENST00000603044 PRIM1P49642 420 aaKnown RBP16.23■□□□□ 0.19
FOCAD-203ENST00000603044 PTPREP23469 700 aa16.21■□□□□ 0.19
FOCAD-203ENST00000603044 C6orf132Q5T0Z8 1188 aa16.19■□□□□ 0.18
FOCAD-203ENST00000603044 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
FOCAD-203ENST00000603044 LSM11P83369 360 aaKnown RBP eCLIP16.18■□□□□ 0.18
FOCAD-203ENST00000603044 SMYD5Q6GMV2 418 aa16.18■□□□□ 0.18
FOCAD-203ENST00000603044 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
FOCAD-203ENST00000603044 KCNK17Q96T54 332 aa16.17■□□□□ 0.18
FOCAD-203ENST00000603044 SLC4A5Q9BY07 1137 aa16.17■□□□□ 0.18
FOCAD-203ENST00000603044 AXIN2Q9Y2T1 843 aa16.17■□□□□ 0.18
FOCAD-203ENST00000603044 PPP1R3GB7ZBB8 358 aa16.16■□□□□ 0.18
FOCAD-203ENST00000603044 PSEN2P49810 448 aa16.15■□□□□ 0.18
FOCAD-203ENST00000603044 TK2O00142 265 aa16.14■□□□□ 0.17
FOCAD-203ENST00000603044 MAP3K7O43318 606 aa16.14■□□□□ 0.17
FOCAD-203ENST00000603044 RBM33Q96EV2 1170 aaKnown RBP16.13■□□□□ 0.17
FOCAD-203ENST00000603044 DMRTA1Q5VZB9 504 aa16.12■□□□□ 0.17
FOCAD-203ENST00000603044 TSR1Q2NL82 804 aaKnown RBP16.11■□□□□ 0.17
FOCAD-203ENST00000603044 SCRIBQ14160 1630 aa16.11■□□□□ 0.17
FOCAD-203ENST00000603044 COL9A1P20849 921 aa16.1■□□□□ 0.17
FOCAD-203ENST00000603044 ZBED2Q9BTP6 218 aa16.1■□□□□ 0.17
FOCAD-203ENST00000603044 CERKQ8TCT0 537 aa16.09■□□□□ 0.17
FOCAD-203ENST00000603044 ONECUT3O60422 494 aaPredicted RBP16.05■□□□□ 0.16
FOCAD-203ENST00000603044 NPDC1Q9NQX5 325 aaPredicted RBP16.05■□□□□ 0.16
FOCAD-203ENST00000603044 ADGRD1Q6QNK2 874 aa16.04■□□□□ 0.16
FOCAD-203ENST00000603044 CDHR5Q9HBB8 845 aa16.04■□□□□ 0.16
FOCAD-203ENST00000603044 RBM27Q9P2N5 1060 aaKnown RBP16.04■□□□□ 0.16
FOCAD-203ENST00000603044 VPS9D1Q9Y2B5 631 aa16.04■□□□□ 0.16
FOCAD-203ENST00000603044 TULP1O00294 542 aaPredicted RBP16.03■□□□□ 0.16
FOCAD-203ENST00000603044 RBM26Q5T8P6 1007 aaKnown RBP16.02■□□□□ 0.16
FOCAD-203ENST00000603044 HRO43593 1189 aa16.01■□□□□ 0.15
FOCAD-203ENST00000603044 PTGDRQ13258 359 aa16■□□□□ 0.15
FOCAD-203ENST00000603044 ANKRD13DQ6ZTN6 518 aa16■□□□□ 0.15
FOCAD-203ENST00000603044 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.99■□□□□ 0.15
FOCAD-203ENST00000603044 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
FOCAD-203ENST00000603044 TTC13Q8NBP0 860 aa15.98■□□□□ 0.15
FOCAD-203ENST00000603044 BCANQ96GW7 911 aa15.98■□□□□ 0.15
FOCAD-203ENST00000603044 GPR37O15354 613 aa15.97■□□□□ 0.15
FOCAD-203ENST00000603044 SPNS2Q8IVW8 549 aa15.97■□□□□ 0.15
FOCAD-203ENST00000603044 TRIM6-TRIM34B2RNG4 842 aa15.96■□□□□ 0.15
FOCAD-203ENST00000603044 BHMG1C9JSJ3 638 aaPredicted RBP15.96■□□□□ 0.15
FOCAD-203ENST00000603044 PRSS12P56730 875 aa15.96■□□□□ 0.15
FOCAD-203ENST00000603044 CC2D2AQ9P2K1 1620 aa15.95■□□□□ 0.14
FOCAD-203ENST00000603044 PROX2Q3B8N5 592 aa15.95■□□□□ 0.14
FOCAD-203ENST00000603044 RABGEF1Q9UJ41 708 aa15.95■□□□□ 0.14
FOCAD-203ENST00000603044 FCHSD2O94868 740 aa15.94■□□□□ 0.14
FOCAD-203ENST00000603044 CDCA7LQ96GN5 454 aa15.94■□□□□ 0.14
FOCAD-203ENST00000603044 NUTM2FA1L443 756 aa15.93■□□□□ 0.14
FOCAD-203ENST00000603044 TSKSQ9UJT2 592 aa15.91■□□□□ 0.14
FOCAD-203ENST00000603044 EIF4G1Q04637 1599 aaKnown RBP15.89■□□□□ 0.13
FOCAD-203ENST00000603044 HIC1Q14526 733 aa15.89■□□□□ 0.13
FOCAD-203ENST00000603044 LMOD2Q6P5Q4 547 aa15.89■□□□□ 0.13
FOCAD-203ENST00000603044 GPIHBP1Q8IV16 184 aa15.89■□□□□ 0.13
FOCAD-203ENST00000603044 FAM198AQ9UFP1 575 aa15.89■□□□□ 0.13
FOCAD-203ENST00000603044 NBPF3Q9H094 633 aa15.87■□□□□ 0.13
FOCAD-203ENST00000603044 KIAA1468Q9P260 1216 aa15.86■□□□□ 0.13
FOCAD-203ENST00000603044 PADI6Q6TGC4 694 aa15.85■□□□□ 0.13
FOCAD-203ENST00000603044 PACS2Q86VP3 889 aa15.85■□□□□ 0.13
FOCAD-203ENST00000603044 LAPTM4BQ86VI4 370 aa15.84■□□□□ 0.13
FOCAD-203ENST00000603044 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
FOCAD-203ENST00000603044 GNPATO15228 680 aa15.83■□□□□ 0.12
FOCAD-203ENST00000603044 MYT1LQ9UL68 1186 aa15.81■□□□□ 0.12
FOCAD-203ENST00000603044 MMRN1Q13201 1228 aa15.8■□□□□ 0.12
FOCAD-203ENST00000603044 NBPF26B4DH59 902 aa15.79■□□□□ 0.12
FOCAD-203ENST00000603044 MRPL50Q8N5N7 158 aaKnown RBP15.78■□□□□ 0.12
FOCAD-203ENST00000603044 C3orf80F5H4A9 247 aa15.77■□□□□ 0.12
FOCAD-203ENST00000603044 TATDN2Q93075 761 aa15.77■□□□□ 0.12
FOCAD-203ENST00000603044 FAM98CQ17RN3 349 aaKnown RBP15.75■□□□□ 0.11
FOCAD-203ENST00000603044 ADGRG1Q9Y653 693 aa15.75■□□□□ 0.11
FOCAD-203ENST00000603044 STAC3Q96MF2 364 aa15.74■□□□□ 0.11
FOCAD-203ENST00000603044 FECHP22830 423 aa15.73■□□□□ 0.11
FOCAD-203ENST00000603044 EYA1Q99502 592 aa15.73■□□□□ 0.11
FOCAD-203ENST00000603044 NUDT18Q6ZVK8 323 aa15.72■□□□□ 0.11
FOCAD-203ENST00000603044 ZC3H15Q8WU90 426 aaKnown RBP15.72■□□□□ 0.11
FOCAD-203ENST00000603044 PNMA3Q9UL41 463 aa15.72■□□□□ 0.11
FOCAD-203ENST00000603044 RNF166Q96A37 237 aaPredicted RBP15.71■□□□□ 0.11
FOCAD-203ENST00000603044 SEPT9Q9UHD8 586 aaPredicted RBP15.71■□□□□ 0.11
FOCAD-203ENST00000603044 ZMYND10O75800 440 aa15.7■□□□□ 0.1
FOCAD-203ENST00000603044 MAP2K5Q13163 448 aa15.69■□□□□ 0.1
FOCAD-203ENST00000603044 ZFRQ96KR1 1074 aaKnown RBP15.68■□□□□ 0.1
FOCAD-203ENST00000603044 OATP04181 439 aa15.67■□□□□ 0.1
FOCAD-203ENST00000603044 BARGINQ6ZT62 677 aa15.67■□□□□ 0.1
FOCAD-203ENST00000603044 RBM46Q8TBY0 533 aaKnown RBP15.67■□□□□ 0.1
FOCAD-203ENST00000603044 SMAPO00193 183 aa15.66■□□□□ 0.1
FOCAD-203ENST00000603044 PXYLP1Q8TE99 480 aa15.65■□□□□ 0.1
FOCAD-203ENST00000603044 MINK1Q8N4C8 1332 aaPredicted RBP15.65■□□□□ 0.1
FOCAD-203ENST00000603044 GOLGA8CPA6NN73 597 aa15.63■□□□□ 0.09
FOCAD-203ENST00000603044 METTL3Q86U44 580 aaKnown RBP15.63■□□□□ 0.09
FOCAD-203ENST00000603044 ANKK1Q8NFD2 765 aa15.62■□□□□ 0.09
FOCAD-203ENST00000603044 WNT2BQ93097 391 aa15.62■□□□□ 0.09
FOCAD-203ENST00000603044 IRF6O14896 467 aa15.61■□□□□ 0.09
FOCAD-203ENST00000603044 THSD4Q6ZMP0 1018 aa15.61■□□□□ 0.09
FOCAD-203ENST00000603044 SOWAHBA6NEL2 793 aa15.6■□□□□ 0.09
FOCAD-203ENST00000603044 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.59■□□□□ 0.09
FOCAD-203ENST00000603044 DNAJB2P25686 324 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms