RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 PRKRIP1Q9H875 184 aaPredicted RBP18.2■□□□□ 0.5
SYMPK-215ENST00000600237 HTATSF1O43719 755 aaKnown RBP18.19■□□□□ 0.5
SYMPK-215ENST00000600237 KIAA2012Q0VF49 1180 aa18.19■□□□□ 0.5
SYMPK-215ENST00000600237 LMOD3Q0VAK6 560 aa18.19■□□□□ 0.5
SYMPK-215ENST00000600237 NGDNQ8NEJ9 315 aaKnown RBP18.19■□□□□ 0.5
SYMPK-215ENST00000600237 USP35Q9P2H5 1018 aa18.19■□□□□ 0.5
SYMPK-215ENST00000600237 ZBED9Q6R2W3 1325 aa18.18■□□□□ 0.5
SYMPK-215ENST00000600237 MFAP1P55081 439 aaKnown RBP18.18■□□□□ 0.5
SYMPK-215ENST00000600237 UACAQ9BZF9 1416 aa18.18■□□□□ 0.5
SYMPK-215ENST00000600237 GOLGA6L3A6NEY3 463 aa18.17■□□□□ 0.5
SYMPK-215ENST00000600237 ST20-MTHFSA0A0A6YYL1 179 aa18.17■□□□□ 0.5
SYMPK-215ENST00000600237 VGFO15240 615 aaPredicted RBP18.17■□□□□ 0.5
SYMPK-215ENST00000600237 GZF1Q9H116 711 aaPredicted RBP18.17■□□□□ 0.5
SYMPK-215ENST00000600237 CENPQQ7L2Z9 268 aaPredicted RBP18.15■□□□□ 0.5
SYMPK-215ENST00000600237 TRAK1Q9UPV9 953 aa18.15■□□□□ 0.5
SYMPK-215ENST00000600237 CLUAP1Q96AJ1 413 aa18.15■□□□□ 0.5
SYMPK-215ENST00000600237 GRIN2BQ13224 1484 aa18.15■□□□□ 0.5
SYMPK-215ENST00000600237 FAM69CQ0P6D2 419 aa18.14■□□□□ 0.49
SYMPK-215ENST00000600237 CCDC146Q8IYE0 955 aa18.14■□□□□ 0.49
SYMPK-215ENST00000600237 MYOM3Q5VTT5 1437 aa18.13■□□□□ 0.49
SYMPK-215ENST00000600237 CFTRP13569 1480 aa18.12■□□□□ 0.49
SYMPK-215ENST00000600237 GNL2Q13823 731 aaKnown RBP18.12■□□□□ 0.49
SYMPK-215ENST00000600237 GPATCH3Q96I76 525 aa18.11■□□□□ 0.49
SYMPK-215ENST00000600237 PANK3Q9H999 370 aa18.1■□□□□ 0.49
SYMPK-215ENST00000600237 NGEFQ8N5V2 710 aa18.1■□□□□ 0.49
SYMPK-215ENST00000600237 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
SYMPK-215ENST00000600237 E9PSI1 815 aa18.09■□□□□ 0.49
SYMPK-215ENST00000600237 RRP1P56182 461 aaKnown RBP18.09■□□□□ 0.49
SYMPK-215ENST00000600237 CGNL1Q0VF96 1302 aa18.09■□□□□ 0.49
SYMPK-215ENST00000600237 CSPP1Q1MSJ5 1256 aa18.09■□□□□ 0.49
SYMPK-215ENST00000600237 USP47Q96K76 1375 aa18.08■□□□□ 0.49
SYMPK-215ENST00000600237 PDE4AP27815 886 aa18.08■□□□□ 0.49
SYMPK-215ENST00000600237 ST18O60284 1047 aa18.07■□□□□ 0.48
SYMPK-215ENST00000600237 AMPHP49418 695 aa18.07■□□□□ 0.48
SYMPK-215ENST00000600237 NUTM2FA1L443 756 aa18.07■□□□□ 0.48
SYMPK-215ENST00000600237 MRC2Q9UBG0 1479 aa18.07■□□□□ 0.48
SYMPK-215ENST00000600237 TULP1O00294 542 aaPredicted RBP18.07■□□□□ 0.48
SYMPK-215ENST00000600237 TRIM6-TRIM34B2RNG4 842 aa18.06■□□□□ 0.48
SYMPK-215ENST00000600237 CCDC9Q9Y3X0 531 aaKnown RBP18.05■□□□□ 0.48
SYMPK-215ENST00000600237 DDX11L8A8MPP1 907 aa18.05■□□□□ 0.48
SYMPK-215ENST00000600237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.05■□□□□ 0.48
SYMPK-215ENST00000600237 FANCIQ9NVI1 1328 aa18.04■□□□□ 0.48
SYMPK-215ENST00000600237 CCDC34Q96HJ3 373 aa18.04■□□□□ 0.48
SYMPK-215ENST00000600237 NESP48681 1621 aa18.03■□□□□ 0.48
SYMPK-215ENST00000600237 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
SYMPK-215ENST00000600237 SLC4A10Q6U841 1118 aa18.03■□□□□ 0.48
SYMPK-215ENST00000600237 CUX1P39880 1505 aa18.03■□□□□ 0.48
SYMPK-215ENST00000600237 IFT140Q96RY7 1462 aa18.03■□□□□ 0.48
SYMPK-215ENST00000600237 ZKSCAN2Q63HK3 967 aa18.02■□□□□ 0.48
SYMPK-215ENST00000600237 PHF14O94880 888 aa18.02■□□□□ 0.48
SYMPK-215ENST00000600237 TPM4P67936 248 aa18.02■□□□□ 0.48
SYMPK-215ENST00000600237 EXOC6Q8TAG9 804 aa18.02■□□□□ 0.48
SYMPK-215ENST00000600237 FGD6Q6ZV73 1430 aa18.02■□□□□ 0.48
SYMPK-215ENST00000600237 CC2D2AQ9P2K1 1620 aa18.02■□□□□ 0.48
SYMPK-215ENST00000600237 ZNF330Q9Y3S2 320 aaPredicted RBP18.01■□□□□ 0.47
SYMPK-215ENST00000600237 HMGXB3Q12766 1538 aa18■□□□□ 0.47
SYMPK-215ENST00000600237 ZNF644Q9H582 1327 aaPredicted RBP18■□□□□ 0.47
SYMPK-215ENST00000600237 GORABQ5T7V8 394 aa18■□□□□ 0.47
SYMPK-215ENST00000600237 KIF3AQ9Y496 699 aa17.99■□□□□ 0.47
SYMPK-215ENST00000600237 CASKIN1Q8WXD9 1431 aa17.99■□□□□ 0.47
SYMPK-215ENST00000600237 PRG4Q92954 1404 aaPredicted RBP17.99■□□□□ 0.47
SYMPK-215ENST00000600237 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.99■□□□□ 0.47
SYMPK-215ENST00000600237 RRP7AQ9Y3A4 280 aaKnown RBP17.98■□□□□ 0.47
SYMPK-215ENST00000600237 LTV1Q96GA3 475 aaPredicted RBP17.98■□□□□ 0.47
SYMPK-215ENST00000600237 CRBNQ96SW2 442 aa17.98■□□□□ 0.47
SYMPK-215ENST00000600237 STAC3Q96MF2 364 aa17.97■□□□□ 0.47
SYMPK-215ENST00000600237 PLIN1O60240 522 aa17.97■□□□□ 0.47
SYMPK-215ENST00000600237 SKOR2Q2VWA4 1001 aaPredicted RBP17.97■□□□□ 0.47
SYMPK-215ENST00000600237 KIF16BQ96L93 1317 aa17.97■□□□□ 0.47
SYMPK-215ENST00000600237 COG3Q96JB2 828 aa17.97■□□□□ 0.47
SYMPK-215ENST00000600237 SYNJ2O15056 1496 aa17.96■□□□□ 0.47
SYMPK-215ENST00000600237 PRDM2Q13029 1718 aa17.96■□□□□ 0.47
SYMPK-215ENST00000600237 KIF21BO75037 1637 aa17.95■□□□□ 0.46
SYMPK-215ENST00000600237 MINK1Q8N4C8 1332 aaPredicted RBP17.95■□□□□ 0.46
SYMPK-215ENST00000600237 GSE1Q14687 1217 aa17.95■□□□□ 0.46
SYMPK-215ENST00000600237 APAF1O14727 1248 aa17.95■□□□□ 0.46
SYMPK-215ENST00000600237 HSP90B1P14625 803 aaKnown RBP17.94■□□□□ 0.46
SYMPK-215ENST00000600237 LRRC9Q6ZRR7 1453 aa17.94■□□□□ 0.46
SYMPK-215ENST00000600237 FYCO1Q9BQS8 1478 aa17.94■□□□□ 0.46
SYMPK-215ENST00000600237 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
SYMPK-215ENST00000600237 FOXD4L1Q9NU39 408 aa17.94■□□□□ 0.46
SYMPK-215ENST00000600237 COG6Q9Y2V7 657 aa17.94■□□□□ 0.46
SYMPK-215ENST00000600237 BCL2L13Q9BXK5 485 aa17.93■□□□□ 0.46
SYMPK-215ENST00000600237 DDX19BQ9UMR2 479 aa17.93■□□□□ 0.46
SYMPK-215ENST00000600237 CCDC7Q96M83 1385 aa17.93■□□□□ 0.46
SYMPK-215ENST00000600237 TAF7LQ5H9L4 462 aa17.93■□□□□ 0.46
SYMPK-215ENST00000600237 ANKRD45Q5TZF3 282 aa17.93■□□□□ 0.46
SYMPK-215ENST00000600237 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
SYMPK-215ENST00000600237 ATP6V1DQ9Y5K8 247 aa17.93■□□□□ 0.46
SYMPK-215ENST00000600237 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
SYMPK-215ENST00000600237 CHMP4CQ96CF2 233 aa17.92■□□□□ 0.46
SYMPK-215ENST00000600237 CHMP3Q9Y3E7 222 aa17.92■□□□□ 0.46
SYMPK-215ENST00000600237 ISY1Q9ULR0 285 aaKnown RBP17.92■□□□□ 0.46
SYMPK-215ENST00000600237 DDX49Q9Y6V7 483 aaKnown RBP17.91■□□□□ 0.46
SYMPK-215ENST00000600237 NCOA2Q15596 1464 aa17.91■□□□□ 0.46
SYMPK-215ENST00000600237 NOL8Q76FK4 1167 aaKnown RBP17.91■□□□□ 0.46
SYMPK-215ENST00000600237 AAMPQ13685 434 aa17.9■□□□□ 0.46
SYMPK-215ENST00000600237 AFAP1Q8N556 730 aa17.9■□□□□ 0.46
SYMPK-215ENST00000600237 ARHGAP5Q13017 1502 aa17.89■□□□□ 0.45
SYMPK-215ENST00000600237 POLA1P09884 1462 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms