RNA–Protein interactions for RNA: ENST00000589302.1

CXXC1P1-203, Transcript of CXXC finger protein 1 pseudogene 1, humanhuman

TSL 3 BASIC

Gene CXXC1P1, Length 746 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1P1-203ENST00000589302 SPNS2Q8IVW8 549 aa13.41□□□□□ -0.26
CXXC1P1-203ENST00000589302 COL9A1P20849 921 aa13.39□□□□□ -0.27
CXXC1P1-203ENST00000589302 EPAS1Q99814 870 aa13.39□□□□□ -0.27
CXXC1P1-203ENST00000589302 TSR1Q2NL82 804 aaKnown RBP13.38□□□□□ -0.27
CXXC1P1-203ENST00000589302 PTPREP23469 700 aa13.37□□□□□ -0.27
CXXC1P1-203ENST00000589302 C6orf132Q5T0Z8 1188 aa13.37□□□□□ -0.27
CXXC1P1-203ENST00000589302 FBXW7Q969H0 707 aa13.37□□□□□ -0.27
CXXC1P1-203ENST00000589302 EN1Q05925 392 aaPredicted RBP13.36□□□□□ -0.27
CXXC1P1-203ENST00000589302 PLSCR2Q9NRY7 297 aa13.36□□□□□ -0.27
CXXC1P1-203ENST00000589302 CDHR5Q9HBB8 845 aa13.33□□□□□ -0.28
CXXC1P1-203ENST00000589302 MAP3K7O43318 606 aa13.32□□□□□ -0.28
CXXC1P1-203ENST00000589302 ADGRD1Q6QNK2 874 aa13.31□□□□□ -0.28
CXXC1P1-203ENST00000589302 ZBED2Q9BTP6 218 aa13.31□□□□□ -0.28
CXXC1P1-203ENST00000589302 TESPA1A2RU30 521 aaPredicted RBP13.3□□□□□ -0.28
CXXC1P1-203ENST00000589302 VPS9D1Q9Y2B5 631 aa13.3□□□□□ -0.28
CXXC1P1-203ENST00000589302 PROX2Q3B8N5 592 aa13.29□□□□□ -0.28
CXXC1P1-203ENST00000589302 HRO43593 1189 aa13.28□□□□□ -0.28
CXXC1P1-203ENST00000589302 MMRN1Q13201 1228 aa13.28□□□□□ -0.28
CXXC1P1-203ENST00000589302 PPP1R3GB7ZBB8 358 aa13.27□□□□□ -0.29
CXXC1P1-203ENST00000589302 TK2O00142 265 aa13.25□□□□□ -0.29
CXXC1P1-203ENST00000589302 SLC24A1O60721 1099 aa13.25□□□□□ -0.29
CXXC1P1-203ENST00000589302 KCNH8Q96L42 1107 aa13.25□□□□□ -0.29
CXXC1P1-203ENST00000589302 RBM26Q5T8P6 1007 aaKnown RBP13.24□□□□□ -0.29
CXXC1P1-203ENST00000589302 NPDC1Q9NQX5 325 aaPredicted RBP13.24□□□□□ -0.29
CXXC1P1-203ENST00000589302 SLC4A5Q9BY07 1137 aa13.23□□□□□ -0.29
CXXC1P1-203ENST00000589302 FAM198AQ9UFP1 575 aa13.22□□□□□ -0.29
CXXC1P1-203ENST00000589302 BHMG1C9JSJ3 638 aaPredicted RBP13.21□□□□□ -0.29
CXXC1P1-203ENST00000589302 TSKSQ9UJT2 592 aa13.19□□□□□ -0.3
CXXC1P1-203ENST00000589302 C3orf80F5H4A9 247 aa13.18□□□□□ -0.3
CXXC1P1-203ENST00000589302 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
CXXC1P1-203ENST00000589302 KIAA1468Q9P260 1216 aa13.17□□□□□ -0.3
CXXC1P1-203ENST00000589302 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
CXXC1P1-203ENST00000589302 TRIM6-TRIM34B2RNG4 842 aa13.15□□□□□ -0.3
CXXC1P1-203ENST00000589302 CDCA7LQ96GN5 454 aa13.15□□□□□ -0.3
CXXC1P1-203ENST00000589302 PRSS12P56730 875 aa13.14□□□□□ -0.31
CXXC1P1-203ENST00000589302 PTGDRQ13258 359 aa13.13□□□□□ -0.31
CXXC1P1-203ENST00000589302 RABGEF1Q9UJ41 708 aa13.13□□□□□ -0.31
CXXC1P1-203ENST00000589302 PADI6Q6TGC4 694 aa13.11□□□□□ -0.31
CXXC1P1-203ENST00000589302 RNF166Q96A37 237 aaPredicted RBP13.11□□□□□ -0.31
CXXC1P1-203ENST00000589302 SMAPO00193 183 aa13.1□□□□□ -0.31
CXXC1P1-203ENST00000589302 SMYD5Q6GMV2 418 aa13.1□□□□□ -0.31
CXXC1P1-203ENST00000589302 SEPT9Q9UHD8 586 aaPredicted RBP13.1□□□□□ -0.31
CXXC1P1-203ENST00000589302 GPR37O15354 613 aa13.08□□□□□ -0.32
CXXC1P1-203ENST00000589302 ONECUT3O60422 494 aaPredicted RBP13.08□□□□□ -0.32
CXXC1P1-203ENST00000589302 TTC13Q8NBP0 860 aa13.08□□□□□ -0.32
CXXC1P1-203ENST00000589302 CERKQ8TCT0 537 aa13.08□□□□□ -0.32
CXXC1P1-203ENST00000589302 MRPL50Q8N5N7 158 aaKnown RBP13.07□□□□□ -0.32
CXXC1P1-203ENST00000589302 FECHP22830 423 aa13.06□□□□□ -0.32
CXXC1P1-203ENST00000589302 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.05□□□□□ -0.32
CXXC1P1-203ENST00000589302 KCTD12Q96CX2 325 aaKnown RBP13.05□□□□□ -0.32
CXXC1P1-203ENST00000589302 STAC3Q96MF2 364 aa13.05□□□□□ -0.32
CXXC1P1-203ENST00000589302 FAM161AQ3B820 660 aa13.04□□□□□ -0.32
CXXC1P1-203ENST00000589302 PACS2Q86VP3 889 aa13.03□□□□□ -0.32
CXXC1P1-203ENST00000589302 TATDN2Q93075 761 aa13.03□□□□□ -0.32
CXXC1P1-203ENST00000589302 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
CXXC1P1-203ENST00000589302 FCHSD2O94868 740 aa13.02□□□□□ -0.33
CXXC1P1-203ENST00000589302 NUDT18Q6ZVK8 323 aa13.02□□□□□ -0.33
CXXC1P1-203ENST00000589302 PNMA3Q9UL41 463 aa13.01□□□□□ -0.33
CXXC1P1-203ENST00000589302 RBM27Q9P2N5 1060 aaKnown RBP13□□□□□ -0.33
CXXC1P1-203ENST00000589302 ZFRQ96KR1 1074 aaKnown RBP12.99□□□□□ -0.33
CXXC1P1-203ENST00000589302 GPIHBP1Q8IV16 184 aa12.98□□□□□ -0.33
CXXC1P1-203ENST00000589302 WNT2BQ93097 391 aa12.98□□□□□ -0.33
CXXC1P1-203ENST00000589302 GOLGA8CPA6NN73 597 aa12.96□□□□□ -0.33
CXXC1P1-203ENST00000589302 FAM98CQ17RN3 349 aaKnown RBP12.96□□□□□ -0.33
CXXC1P1-203ENST00000589302 LMOD2Q6P5Q4 547 aa12.96□□□□□ -0.33
CXXC1P1-203ENST00000589302 LAPTM4BQ86VI4 370 aa12.96□□□□□ -0.33
CXXC1P1-203ENST00000589302 EYA1Q99502 592 aa12.96□□□□□ -0.33
CXXC1P1-203ENST00000589302 ADGRG1Q9Y653 693 aa12.95□□□□□ -0.34
CXXC1P1-203ENST00000589302 GNPATO15228 680 aa12.94□□□□□ -0.34
CXXC1P1-203ENST00000589302 BCAMP50895 628 aa12.94□□□□□ -0.34
CXXC1P1-203ENST00000589302 HIC1Q14526 733 aa12.94□□□□□ -0.34
CXXC1P1-203ENST00000589302 THSD4Q6ZMP0 1018 aa12.94□□□□□ -0.34
CXXC1P1-203ENST00000589302 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
CXXC1P1-203ENST00000589302 PTPN5P54829 565 aa12.93□□□□□ -0.34
CXXC1P1-203ENST00000589302 SAMD7Q7Z3H4 446 aa12.9□□□□□ -0.34
CXXC1P1-203ENST00000589302 TULP1O00294 542 aaPredicted RBP12.89□□□□□ -0.35
CXXC1P1-203ENST00000589302 ANKK1Q8NFD2 765 aa12.89□□□□□ -0.35
CXXC1P1-203ENST00000589302 SOWAHBA6NEL2 793 aa12.88□□□□□ -0.35
CXXC1P1-203ENST00000589302 SWT1Q5T5J6 900 aaKnown RBP12.85□□□□□ -0.35
CXXC1P1-203ENST00000589302 ZC3H15Q8WU90 426 aaKnown RBP12.85□□□□□ -0.35
CXXC1P1-203ENST00000589302 NLRP7Q8WX94 980 aa12.85□□□□□ -0.35
CXXC1P1-203ENST00000589302 PHOX2BQ99453 314 aa12.85□□□□□ -0.35
CXXC1P1-203ENST00000589302 HCSTQ9UBK5 93 aa12.85□□□□□ -0.35
CXXC1P1-203ENST00000589302 PXYLP1Q8TE99 480 aa12.84□□□□□ -0.35
CXXC1P1-203ENST00000589302 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.84□□□□□ -0.35
CXXC1P1-203ENST00000589302 RCCD1A6NED2 376 aa12.83□□□□□ -0.36
CXXC1P1-203ENST00000589302 LRCH3Q96II8 777 aa12.83□□□□□ -0.36
CXXC1P1-203ENST00000589302 WBP1LQ9NX94 342 aa12.83□□□□□ -0.36
CXXC1P1-203ENST00000589302 METTL3Q86U44 580 aaKnown RBP12.82□□□□□ -0.36
CXXC1P1-203ENST00000589302 RBM46Q8TBY0 533 aaKnown RBP12.82□□□□□ -0.36
CXXC1P1-203ENST00000589302 BCANQ96GW7 911 aa12.81□□□□□ -0.36
CXXC1P1-203ENST00000589302 HPS5Q9UPZ3 1129 aa12.81□□□□□ -0.36
CXXC1P1-203ENST00000589302 ZMYND10O75800 440 aa12.78□□□□□ -0.36
CXXC1P1-203ENST00000589302 IRF6O14896 467 aa12.77□□□□□ -0.37
CXXC1P1-203ENST00000589302 OATP04181 439 aa12.77□□□□□ -0.37
CXXC1P1-203ENST00000589302 DNAJB2P25686 324 aa12.77□□□□□ -0.37
CXXC1P1-203ENST00000589302 TMEM134Q9H6X4 195 aa12.77□□□□□ -0.37
CXXC1P1-203ENST00000589302 TSR3Q9UJK0 312 aaKnown RBP12.77□□□□□ -0.37
CXXC1P1-203ENST00000589302 MAP2K5Q13163 448 aa12.76□□□□□ -0.37
CXXC1P1-203ENST00000589302 RNF40O75150 1001 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms