RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 AEBP2Q6ZN18 517 aaPredicted RBP12.32□□□□□ -0.44
GPATCH8-205ENST00000587228 SPRYD3Q8NCJ5 442 aa12.32□□□□□ -0.44
GPATCH8-205ENST00000587228 CHMP4AQ9BY43 222 aa12.32□□□□□ -0.44
GPATCH8-205ENST00000587228 PSME1Q06323 249 aa12.31□□□□□ -0.44
GPATCH8-205ENST00000587228 LMOD3Q0VAK6 560 aa12.31□□□□□ -0.44
GPATCH8-205ENST00000587228 TAF7LQ5H9L4 462 aa12.31□□□□□ -0.44
GPATCH8-205ENST00000587228 GORABQ5T7V8 394 aa12.31□□□□□ -0.44
GPATCH8-205ENST00000587228 GTF2E1P29083 439 aaPredicted RBP12.3□□□□□ -0.44
GPATCH8-205ENST00000587228 RWDD1Q9H446 243 aaPredicted RBP12.3□□□□□ -0.44
GPATCH8-205ENST00000587228 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
GPATCH8-205ENST00000587228 BCL2L13Q9BXK5 485 aa12.3□□□□□ -0.44
GPATCH8-205ENST00000587228 MRC2Q9UBG0 1479 aa12.3□□□□□ -0.44
GPATCH8-205ENST00000587228 ANP32EQ9BTT0 268 aa12.3□□□□□ -0.44
GPATCH8-205ENST00000587228 ANKRD50Q9ULJ7 1429 aa12.3□□□□□ -0.44
GPATCH8-205ENST00000587228 TRIM44Q96DX7 344 aaPredicted RBP12.29□□□□□ -0.44
GPATCH8-205ENST00000587228 CENPJQ9HC77 1338 aaPredicted RBP12.29□□□□□ -0.44
GPATCH8-205ENST00000587228 KIAA1211Q6ZU35 1233 aa12.29□□□□□ -0.44
GPATCH8-205ENST00000587228 MYBBP1AQ9BQG0 1328 aaKnown RBP12.29□□□□□ -0.44
GPATCH8-205ENST00000587228 MCCP23508 829 aa12.29□□□□□ -0.44
GPATCH8-205ENST00000587228 PTMAP06454 111 aaKnown RBP12.28□□□□□ -0.44
GPATCH8-205ENST00000587228 TEFQ10587 303 aa12.28□□□□□ -0.44
GPATCH8-205ENST00000587228 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.28□□□□□ -0.44
GPATCH8-205ENST00000587228 HSCBQ8IWL3 235 aa12.28□□□□□ -0.44
GPATCH8-205ENST00000587228 PRKRIP1Q9H875 184 aaPredicted RBP12.28□□□□□ -0.44
GPATCH8-205ENST00000587228 C1orf141Q5JVX7 400 aa12.27□□□□□ -0.45
GPATCH8-205ENST00000587228 TMX4Q9H1E5 349 aaPredicted RBP12.27□□□□□ -0.45
GPATCH8-205ENST00000587228 KIF21BO75037 1637 aa12.27□□□□□ -0.45
GPATCH8-205ENST00000587228 NCOA2Q15596 1464 aa12.26□□□□□ -0.45
GPATCH8-205ENST00000587228 NUTM2GQ5VZR2 741 aa12.26□□□□□ -0.45
GPATCH8-205ENST00000587228 LRRC9Q6ZRR7 1453 aa12.26□□□□□ -0.45
GPATCH8-205ENST00000587228 RAPGEF3O95398 923 aa12.26□□□□□ -0.45
GPATCH8-205ENST00000587228 SYNJ2O15056 1496 aa12.26□□□□□ -0.45
GPATCH8-205ENST00000587228 ARHGAP5Q13017 1502 aa12.26□□□□□ -0.45
GPATCH8-205ENST00000587228 TOPBP1Q92547 1522 aa12.26□□□□□ -0.45
GPATCH8-205ENST00000587228 NGEFQ8N5V2 710 aa12.26□□□□□ -0.45
GPATCH8-205ENST00000587228 GOLGA6L4A6NEF3 574 aa12.26□□□□□ -0.45
GPATCH8-205ENST00000587228 APAF1O14727 1248 aa12.26□□□□□ -0.45
GPATCH8-205ENST00000587228 CASKIN1Q8WXD9 1431 aa12.25□□□□□ -0.45
GPATCH8-205ENST00000587228 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
GPATCH8-205ENST00000587228 SYNJ1O43426 1573 aa12.25□□□□□ -0.45
GPATCH8-205ENST00000587228 ATF3P18847 181 aa12.25□□□□□ -0.45
GPATCH8-205ENST00000587228 SYTL4Q96C24 671 aaPredicted RBP12.25□□□□□ -0.45
GPATCH8-205ENST00000587228 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
GPATCH8-205ENST00000587228 CFAP70Q5T0N1 1121 aa12.25□□□□□ -0.45
GPATCH8-205ENST00000587228 TRIM6-TRIM34B2RNG4 842 aa12.24□□□□□ -0.45
GPATCH8-205ENST00000587228 HMMRO75330 724 aa12.24□□□□□ -0.45
GPATCH8-205ENST00000587228 TXNDC2Q86VQ3 553 aa12.24□□□□□ -0.45
GPATCH8-205ENST00000587228 CABP2Q9NPB3 220 aa12.24□□□□□ -0.45
GPATCH8-205ENST00000587228 GGNBP2Q9H3C7 697 aa12.24□□□□□ -0.45
GPATCH8-205ENST00000587228 ARAP1Q96P48 1450 aa12.24□□□□□ -0.45
GPATCH8-205ENST00000587228 TCERG1O14776 1098 aaKnown RBP12.23□□□□□ -0.45
GPATCH8-205ENST00000587228 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
GPATCH8-205ENST00000587228 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
GPATCH8-205ENST00000587228 HDAC5Q9UQL6 1122 aa12.23□□□□□ -0.45
GPATCH8-205ENST00000587228 EIF2S2P20042 333 aaKnown RBP12.23□□□□□ -0.45
GPATCH8-205ENST00000587228 NOP58Q9Y2X3 529 aaKnown RBP12.23□□□□□ -0.45
GPATCH8-205ENST00000587228 SCAPERQ9BY12 1400 aa12.22□□□□□ -0.45
GPATCH8-205ENST00000587228 NECTIN2Q92692 538 aa12.22□□□□□ -0.45
GPATCH8-205ENST00000587228 SNAPC4Q5SXM2 1469 aa12.22□□□□□ -0.45
GPATCH8-205ENST00000587228 MSH5O43196 834 aa12.22□□□□□ -0.45
GPATCH8-205ENST00000587228 FRAT2O75474 233 aaPredicted RBP12.22□□□□□ -0.45
GPATCH8-205ENST00000587228 CUX1P39880 1505 aa12.21□□□□□ -0.45
GPATCH8-205ENST00000587228 G3V3G9 751 aa12.21□□□□□ -0.45
GPATCH8-205ENST00000587228 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
GPATCH8-205ENST00000587228 PMFBP1Q8TBY8 1022 aa12.21□□□□□ -0.45
GPATCH8-205ENST00000587228 PLIN1O60240 522 aa12.21□□□□□ -0.45
GPATCH8-205ENST00000587228 TTC5Q8N0Z6 440 aa12.2□□□□□ -0.46
GPATCH8-205ENST00000587228 FYCO1Q9BQS8 1478 aa12.2□□□□□ -0.46
GPATCH8-205ENST00000587228 NLRP6P59044 892 aa12.2□□□□□ -0.46
GPATCH8-205ENST00000587228 HMOX1P09601 288 aa12.2□□□□□ -0.46
GPATCH8-205ENST00000587228 CFAP44Q96MT7 982 aa12.2□□□□□ -0.46
GPATCH8-205ENST00000587228 GNL2Q13823 731 aaKnown RBP12.19□□□□□ -0.46
GPATCH8-205ENST00000587228 MFAP1P55081 439 aaKnown RBP12.19□□□□□ -0.46
GPATCH8-205ENST00000587228 RIPK4P57078 832 aa12.19□□□□□ -0.46
GPATCH8-205ENST00000587228 MEX3CQ5U5Q3 659 aaKnown RBP12.19□□□□□ -0.46
GPATCH8-205ENST00000587228 NLRP2Q9NX02 1062 aa12.19□□□□□ -0.46
GPATCH8-205ENST00000587228 PROSER2Q86WR7 435 aaPredicted RBP12.18□□□□□ -0.46
GPATCH8-205ENST00000587228 GPATCH3Q96I76 525 aa12.18□□□□□ -0.46
GPATCH8-205ENST00000587228 DNTTIP2Q5QJE6 756 aaKnown RBP12.18□□□□□ -0.46
GPATCH8-205ENST00000587228 USP35Q9P2H5 1018 aa12.18□□□□□ -0.46
GPATCH8-205ENST00000587228 SLKQ9H2G2 1235 aaPredicted RBP12.17□□□□□ -0.46
GPATCH8-205ENST00000587228 KIF7Q2M1P5 1343 aa12.17□□□□□ -0.46
GPATCH8-205ENST00000587228 STAC3Q96MF2 364 aa12.17□□□□□ -0.46
GPATCH8-205ENST00000587228 HMGXB3Q12766 1538 aa12.17□□□□□ -0.46
GPATCH8-205ENST00000587228 NBPF1Q3BBV0 1214 aa12.16□□□□□ -0.46
GPATCH8-205ENST00000587228 RAPGEF4Q8WZA2 1011 aa12.16□□□□□ -0.46
GPATCH8-205ENST00000587228 E9PSI1 815 aa12.16□□□□□ -0.46
GPATCH8-205ENST00000587228 ESCO1Q5FWF5 840 aa12.16□□□□□ -0.46
GPATCH8-205ENST00000587228 SLC26A8Q96RN1 970 aa12.16□□□□□ -0.46
GPATCH8-205ENST00000587228 COG6Q9Y2V7 657 aa12.16□□□□□ -0.46
GPATCH8-205ENST00000587228 TOMM22Q9NS69 142 aa12.16□□□□□ -0.46
GPATCH8-205ENST00000587228 ERICH6BQ5W0A0 696 aa12.15□□□□□ -0.46
GPATCH8-205ENST00000587228 NOL8Q76FK4 1167 aaKnown RBP12.15□□□□□ -0.46
GPATCH8-205ENST00000587228 ZKSCAN2Q63HK3 967 aa12.15□□□□□ -0.46
GPATCH8-205ENST00000587228 PRAM1Q96QH2 718 aa12.15□□□□□ -0.46
GPATCH8-205ENST00000587228 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.47
GPATCH8-205ENST00000587228 NEXNQ0ZGT2 675 aa12.14□□□□□ -0.47
GPATCH8-205ENST00000587228 THEMISQ8N1K5 641 aaPredicted RBP12.14□□□□□ -0.47
GPATCH8-205ENST00000587228 ABTB2Q8N961 1025 aa12.14□□□□□ -0.47
GPATCH8-205ENST00000587228 PRXQ9BXM0 1461 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms