RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
SRSF1-205ENST00000582730 UHRF1BP1LA0JNW5 1464 aa18.79■□□□□ 0.6
SRSF1-205ENST00000582730 MAST1Q9Y2H9 1570 aa18.78■□□□□ 0.6
SRSF1-205ENST00000582730 AFAP1Q8N556 730 aa18.78■□□□□ 0.6
SRSF1-205ENST00000582730 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.6
SRSF1-205ENST00000582730 UHRF1BP1Q6BDS2 1440 aa18.77■□□□□ 0.6
SRSF1-205ENST00000582730 TRAPPC8Q9Y2L5 1435 aa18.77■□□□□ 0.6
SRSF1-205ENST00000582730 ROCK2O75116 1388 aaKnown RBP18.77■□□□□ 0.6
SRSF1-205ENST00000582730 ST20-MTHFSA0A0A6YYL1 179 aa18.77■□□□□ 0.6
SRSF1-205ENST00000582730 SPAG9O60271 1321 aaKnown RBP18.76■□□□□ 0.59
SRSF1-205ENST00000582730 KDM5CP41229 1560 aa18.75■□□□□ 0.59
SRSF1-205ENST00000582730 BCORL1Q5H9F3 1711 aa18.75■□□□□ 0.59
SRSF1-205ENST00000582730 DUOX2Q9NRD8 1548 aa18.74■□□□□ 0.59
SRSF1-205ENST00000582730 PLXNC1O60486 1568 aa18.74■□□□□ 0.59
SRSF1-205ENST00000582730 ABCC1P33527 1531 aa18.73■□□□□ 0.59
SRSF1-205ENST00000582730 UNC13BO14795 1591 aa18.73■□□□□ 0.59
SRSF1-205ENST00000582730 POLR1AO95602 1720 aaPredicted RBP18.72■□□□□ 0.59
SRSF1-205ENST00000582730 PLA2R1Q13018 1463 aa18.7■□□□□ 0.58
SRSF1-205ENST00000582730 ERBINQ96RT1 1412 aa18.7■□□□□ 0.58
SRSF1-205ENST00000582730 WDR7Q9Y4E6 1490 aa18.69■□□□□ 0.58
SRSF1-205ENST00000582730 NBPF1Q3BBV0 1214 aa18.69■□□□□ 0.58
SRSF1-205ENST00000582730 IQGAP3Q86VI3 1631 aa18.67■□□□□ 0.58
SRSF1-205ENST00000582730 RBM19Q9Y4C8 960 aaKnown RBP18.67■□□□□ 0.58
SRSF1-205ENST00000582730 PRAG1Q86YV5 1406 aa18.67■□□□□ 0.58
SRSF1-205ENST00000582730 DHX29Q7Z478 1369 aaKnown RBP18.66■□□□□ 0.58
SRSF1-205ENST00000582730 ARID4BQ4LE39 1312 aaPredicted RBP18.66■□□□□ 0.58
SRSF1-205ENST00000582730 FANCAO15360 1455 aa18.66■□□□□ 0.58
SRSF1-205ENST00000582730 IRX6P78412 446 aaPredicted RBP18.65■□□□□ 0.58
SRSF1-205ENST00000582730 A2MP01023 1474 aa18.65■□□□□ 0.58
SRSF1-205ENST00000582730 NPM1P06748 294 aaKnown RBP eCLIP18.64■□□□□ 0.57
SRSF1-205ENST00000582730 SENP3-EIF4A1A0A087X0R7 540 aa18.62■□□□□ 0.57
SRSF1-205ENST00000582730 KIF3BO15066 747 aa18.62■□□□□ 0.57
SRSF1-205ENST00000582730 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
SRSF1-205ENST00000582730 ASXL2Q76L83 1435 aa18.61■□□□□ 0.57
SRSF1-205ENST00000582730 SCAPERQ9BY12 1400 aa18.61■□□□□ 0.57
SRSF1-205ENST00000582730 ZFYVE16Q7Z3T8 1539 aa18.61■□□□□ 0.57
SRSF1-205ENST00000582730 MAGI2Q86UL8 1455 aa18.6■□□□□ 0.57
SRSF1-205ENST00000582730 ADGRL1O94910 1474 aa18.6■□□□□ 0.57
SRSF1-205ENST00000582730 TMC1Q8TDI8 760 aa18.59■□□□□ 0.57
SRSF1-205ENST00000582730 TRPM1Q7Z4N2 1603 aa18.59■□□□□ 0.57
SRSF1-205ENST00000582730 RTEL1-TNFRSF6BF6WH68 1400 aa18.58■□□□□ 0.57
SRSF1-205ENST00000582730 ARAP3Q8WWN8 1544 aa18.58■□□□□ 0.56
SRSF1-205ENST00000582730 KANK1Q14678 1352 aa18.56■□□□□ 0.56
SRSF1-205ENST00000582730 ATP7AQ04656 1500 aa18.56■□□□□ 0.56
SRSF1-205ENST00000582730 ZBED9Q6R2W3 1325 aa18.56■□□□□ 0.56
SRSF1-205ENST00000582730 ABCA9Q8IUA7 1624 aa18.54■□□□□ 0.56
SRSF1-205ENST00000582730 ATP10AO60312 1499 aa18.54■□□□□ 0.56
SRSF1-205ENST00000582730 E9PCH4 1651 aa18.52■□□□□ 0.56
SRSF1-205ENST00000582730 GPRASP1Q5JY77 1395 aa18.52■□□□□ 0.55
SRSF1-205ENST00000582730 DISP3Q9P2K9 1392 aa18.5■□□□□ 0.55
SRSF1-205ENST00000582730 EIF2AK4Q9P2K8 1649 aaKnown RBP18.5■□□□□ 0.55
SRSF1-205ENST00000582730 TMF1P82094 1093 aa18.49■□□□□ 0.55
SRSF1-205ENST00000582730 INO80Q9ULG1 1556 aaPredicted RBP18.49■□□□□ 0.55
SRSF1-205ENST00000582730 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
SRSF1-205ENST00000582730 MSH5O43196 834 aa18.48■□□□□ 0.55
SRSF1-205ENST00000582730 TESK2Q96S53 571 aa18.48■□□□□ 0.55
SRSF1-205ENST00000582730 RALBP1Q15311 655 aa18.48■□□□□ 0.55
SRSF1-205ENST00000582730 CC2D1BQ5T0F9 858 aaKnown RBP18.48■□□□□ 0.55
SRSF1-205ENST00000582730 PRDM15P57071 1507 aaPredicted RBP18.47■□□□□ 0.55
SRSF1-205ENST00000582730 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
SRSF1-205ENST00000582730 KTN1Q86UP2 1357 aaKnown RBP18.47■□□□□ 0.55
SRSF1-205ENST00000582730 TRPM2O94759 1503 aa18.46■□□□□ 0.55
SRSF1-205ENST00000582730 COL17A1Q9UMD9 1497 aaPredicted RBP18.45■□□□□ 0.54
SRSF1-205ENST00000582730 CD109Q6YHK3 1445 aa18.45■□□□□ 0.54
SRSF1-205ENST00000582730 PANK3Q9H999 370 aa18.45■□□□□ 0.54
SRSF1-205ENST00000582730 CHGAP10645 457 aaKnown RBP18.45■□□□□ 0.54
SRSF1-205ENST00000582730 SPHKAPQ2M3C7 1700 aa18.44■□□□□ 0.54
SRSF1-205ENST00000582730 CLTCL1P53675 1640 aa18.44■□□□□ 0.54
SRSF1-205ENST00000582730 GGT6Q6P531 493 aa18.44■□□□□ 0.54
SRSF1-205ENST00000582730 DEPDC5O75140 1603 aa18.43■□□□□ 0.54
SRSF1-205ENST00000582730 TET3O43151 1660 aa18.43■□□□□ 0.54
SRSF1-205ENST00000582730 SALL2Q9Y467 1007 aaPredicted RBP18.43■□□□□ 0.54
SRSF1-205ENST00000582730 PTPRTO14522 1441 aa18.42■□□□□ 0.54
SRSF1-205ENST00000582730 ZNF518AQ6AHZ1 1483 aa18.42■□□□□ 0.54
SRSF1-205ENST00000582730 LAMC1P11047 1609 aa18.41■□□□□ 0.54
SRSF1-205ENST00000582730 BRD4O60885 1362 aaPredicted RBP18.41■□□□□ 0.54
SRSF1-205ENST00000582730 UGGT1Q9NYU2 1555 aa18.41■□□□□ 0.54
SRSF1-205ENST00000582730 NLRP13Q86W25 1043 aa18.4■□□□□ 0.54
SRSF1-205ENST00000582730 MADDQ8WXG6 1647 aa18.4■□□□□ 0.54
SRSF1-205ENST00000582730 PER1O15534 1290 aaPredicted RBP18.39■□□□□ 0.53
SRSF1-205ENST00000582730 CEP152O94986 1710 aa18.39■□□□□ 0.53
SRSF1-205ENST00000582730 KIDINS220Q9ULH0 1771 aa18.38■□□□□ 0.53
SRSF1-205ENST00000582730 NUDCQ9Y266 331 aa18.37■□□□□ 0.53
SRSF1-205ENST00000582730 RAPGEF3O95398 923 aa18.37■□□□□ 0.53
SRSF1-205ENST00000582730 CFAP70Q5T0N1 1121 aa18.37■□□□□ 0.53
SRSF1-205ENST00000582730 PARD3Q8TEW0 1356 aa18.37■□□□□ 0.53
SRSF1-205ENST00000582730 RNF17Q9BXT8 1623 aaKnown RBP18.37■□□□□ 0.53
SRSF1-205ENST00000582730 VWDEQ8N2E2 1590 aa18.36■□□□□ 0.53
SRSF1-205ENST00000582730 MROH1Q8NDA8 1641 aa18.36■□□□□ 0.53
SRSF1-205ENST00000582730 POGZQ7Z3K3 1410 aa18.35■□□□□ 0.53
SRSF1-205ENST00000582730 ADGRF5Q8IZF2 1346 aa18.35■□□□□ 0.53
SRSF1-205ENST00000582730 FANCIQ9NVI1 1328 aa18.35■□□□□ 0.53
SRSF1-205ENST00000582730 STAC3Q96MF2 364 aa18.34■□□□□ 0.53
SRSF1-205ENST00000582730 SCAF11Q99590 1463 aaKnown RBP18.34■□□□□ 0.53
SRSF1-205ENST00000582730 SMG6Q86US8 1419 aaKnown RBP18.34■□□□□ 0.53
SRSF1-205ENST00000582730 PPP4R2Q9NY27 417 aa18.34■□□□□ 0.53
SRSF1-205ENST00000582730 KNSTRNQ9Y448 316 aa18.33■□□□□ 0.53
SRSF1-205ENST00000582730 B4GALNT3Q6L9W6 998 aa18.33■□□□□ 0.52
SRSF1-205ENST00000582730 WASHC2CQ9Y4E1 1318 aa18.33■□□□□ 0.52
SRSF1-205ENST00000582730 LRPPRCP42704 1394 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms