RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 DDX12PQ92771 950 aa12.91□□□□□ -0.34
PPP4R1-216ENST00000580283 PHF14O94880 888 aa12.9□□□□□ -0.34
PPP4R1-216ENST00000580283 ZDHHC16Q969W1 377 aa12.89□□□□□ -0.35
PPP4R1-216ENST00000580283 SLC24A1O60721 1099 aa12.88□□□□□ -0.35
PPP4R1-216ENST00000580283 PBX2P40425 430 aa12.88□□□□□ -0.35
PPP4R1-216ENST00000580283 KCNH8Q96L42 1107 aa12.88□□□□□ -0.35
PPP4R1-216ENST00000580283 EPAS1Q99814 870 aa12.88□□□□□ -0.35
PPP4R1-216ENST00000580283 PCDHGA10Q9Y5H3 936 aa12.88□□□□□ -0.35
PPP4R1-216ENST00000580283 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
PPP4R1-216ENST00000580283 GRXCR2A6NFK2 248 aa12.87□□□□□ -0.35
PPP4R1-216ENST00000580283 TYW1BQ6NUM6 668 aa12.87□□□□□ -0.35
PPP4R1-216ENST00000580283 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
PPP4R1-216ENST00000580283 ARHGAP33O14559 1287 aa12.84□□□□□ -0.35
PPP4R1-216ENST00000580283 NBR1Q14596 966 aa12.84□□□□□ -0.35
PPP4R1-216ENST00000580283 KRTAP3-3Q9BYR6 98 aa12.83□□□□□ -0.36
PPP4R1-216ENST00000580283 KRTAP3-2Q9BYR7 98 aa12.83□□□□□ -0.36
PPP4R1-216ENST00000580283 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.36
PPP4R1-216ENST00000580283 AXIN2Q9Y2T1 843 aa12.83□□□□□ -0.36
PPP4R1-216ENST00000580283 BAZ1BQ9UIG0 1483 aaKnown RBP12.83□□□□□ -0.36
PPP4R1-216ENST00000580283 PTPREP23469 700 aa12.82□□□□□ -0.36
PPP4R1-216ENST00000580283 KCNK17Q96T54 332 aa12.82□□□□□ -0.36
PPP4R1-216ENST00000580283 ADAM33Q9BZ11 813 aa12.82□□□□□ -0.36
PPP4R1-216ENST00000580283 RBM33Q96EV2 1170 aaKnown RBP12.81□□□□□ -0.36
PPP4R1-216ENST00000580283 POTEEQ6S8J3 1075 aa12.8□□□□□ -0.36
PPP4R1-216ENST00000580283 PEG3Q9GZU2 1588 aa12.8□□□□□ -0.36
PPP4R1-216ENST00000580283 SEMA3EO15041 775 aa12.79□□□□□ -0.36
PPP4R1-216ENST00000580283 PSEN2P49810 448 aa12.79□□□□□ -0.36
PPP4R1-216ENST00000580283 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
PPP4R1-216ENST00000580283 MAP3K7O43318 606 aa12.77□□□□□ -0.37
PPP4R1-216ENST00000580283 MLLT3P42568 568 aaPredicted RBP12.77□□□□□ -0.37
PPP4R1-216ENST00000580283 LSM11P83369 360 aaKnown RBP eCLIP12.77□□□□□ -0.37
PPP4R1-216ENST00000580283 ANKRD13DQ6ZTN6 518 aa12.77□□□□□ -0.37
PPP4R1-216ENST00000580283 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
PPP4R1-216ENST00000580283 BAZ1AQ9NRL2 1556 aaPredicted RBP12.74□□□□□ -0.37
PPP4R1-216ENST00000580283 C6orf132Q5T0Z8 1188 aa12.74□□□□□ -0.37
PPP4R1-216ENST00000580283 OSBPP22059 807 aa12.73□□□□□ -0.37
PPP4R1-216ENST00000580283 DMRTA1Q5VZB9 504 aa12.73□□□□□ -0.37
PPP4R1-216ENST00000580283 SMYD5Q6GMV2 418 aa12.73□□□□□ -0.37
PPP4R1-216ENST00000580283 WDR62O43379 1518 aa12.72□□□□□ -0.37
PPP4R1-216ENST00000580283 TESPA1A2RU30 521 aaPredicted RBP12.71□□□□□ -0.37
PPP4R1-216ENST00000580283 MRC2Q9UBG0 1479 aa12.71□□□□□ -0.38
PPP4R1-216ENST00000580283 MROH2BQ7Z745 1585 aa12.7□□□□□ -0.38
PPP4R1-216ENST00000580283 PPP1R3GB7ZBB8 358 aa12.7□□□□□ -0.38
PPP4R1-216ENST00000580283 CADPSQ9ULU8 1353 aa12.69□□□□□ -0.38
PPP4R1-216ENST00000580283 TSR1Q2NL82 804 aaKnown RBP12.69□□□□□ -0.38
PPP4R1-216ENST00000580283 PRIM1P49642 420 aaKnown RBP12.68□□□□□ -0.38
PPP4R1-216ENST00000580283 TK2O00142 265 aa12.67□□□□□ -0.38
PPP4R1-216ENST00000580283 TULP1O00294 542 aaPredicted RBP12.67□□□□□ -0.38
PPP4R1-216ENST00000580283 ADGRD1Q6QNK2 874 aa12.67□□□□□ -0.38
PPP4R1-216ENST00000580283 COL9A1P20849 921 aa12.66□□□□□ -0.38
PPP4R1-216ENST00000580283 SPNS2Q8IVW8 549 aa12.65□□□□□ -0.38
PPP4R1-216ENST00000580283 ZBED2Q9BTP6 218 aa12.65□□□□□ -0.38
PPP4R1-216ENST00000580283 SLC4A5Q9BY07 1137 aa12.65□□□□□ -0.38
PPP4R1-216ENST00000580283 CERKQ8TCT0 537 aa12.64□□□□□ -0.39
PPP4R1-216ENST00000580283 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
PPP4R1-216ENST00000580283 RIMBP3CA6NJZ7 1639 aa12.63□□□□□ -0.39
PPP4R1-216ENST00000580283 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
PPP4R1-216ENST00000580283 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
PPP4R1-216ENST00000580283 VPS9D1Q9Y2B5 631 aa12.63□□□□□ -0.39
PPP4R1-216ENST00000580283 NUTM2FA1L443 756 aa12.62□□□□□ -0.39
PPP4R1-216ENST00000580283 CDHR5Q9HBB8 845 aa12.62□□□□□ -0.39
PPP4R1-216ENST00000580283 PLSCR2Q9NRY7 297 aa12.61□□□□□ -0.39
PPP4R1-216ENST00000580283 PROX2Q3B8N5 592 aa12.6□□□□□ -0.39
PPP4R1-216ENST00000580283 RBM26Q5T8P6 1007 aaKnown RBP12.57□□□□□ -0.4
PPP4R1-216ENST00000580283 TRIM6-TRIM34B2RNG4 842 aa12.56□□□□□ -0.4
PPP4R1-216ENST00000580283 NBPF3Q9H094 633 aa12.56□□□□□ -0.4
PPP4R1-216ENST00000580283 MYT1LQ9UL68 1186 aa12.56□□□□□ -0.4
PPP4R1-216ENST00000580283 CEP164Q9UPV0 1460 aa12.56□□□□□ -0.4
PPP4R1-216ENST00000580283 WIZO95785 1651 aa12.55□□□□□ -0.4
PPP4R1-216ENST00000580283 HRO43593 1189 aa12.55□□□□□ -0.4
PPP4R1-216ENST00000580283 ONECUT3O60422 494 aaPredicted RBP12.55□□□□□ -0.4
PPP4R1-216ENST00000580283 PRSS12P56730 875 aa12.55□□□□□ -0.4
PPP4R1-216ENST00000580283 CDCA7LQ96GN5 454 aa12.55□□□□□ -0.4
PPP4R1-216ENST00000580283 RABGEF1Q9UJ41 708 aa12.55□□□□□ -0.4
PPP4R1-216ENST00000580283 FANCD2Q9BXW9 1451 aa12.54□□□□□ -0.4
PPP4R1-216ENST00000580283 MMRN1Q13201 1228 aa12.53□□□□□ -0.4
PPP4R1-216ENST00000580283 PACS2Q86VP3 889 aa12.53□□□□□ -0.4
PPP4R1-216ENST00000580283 NPDC1Q9NQX5 325 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-216ENST00000580283 KIAA1468Q9P260 1216 aa12.53□□□□□ -0.4
PPP4R1-216ENST00000580283 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.4
PPP4R1-216ENST00000580283 FCHSD2O94868 740 aa12.52□□□□□ -0.41
PPP4R1-216ENST00000580283 PTGDRQ13258 359 aa12.52□□□□□ -0.41
PPP4R1-216ENST00000580283 MRPL50Q8N5N7 158 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-216ENST00000580283 GOLGA8CPA6NN73 597 aa12.51□□□□□ -0.41
PPP4R1-216ENST00000580283 RBM27Q9P2N5 1060 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-216ENST00000580283 ARHGEF11O15085 1522 aa12.51□□□□□ -0.41
PPP4R1-216ENST00000580283 BHMG1C9JSJ3 638 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-216ENST00000580283 GPIHBP1Q8IV16 184 aa12.5□□□□□ -0.41
PPP4R1-216ENST00000580283 TSKSQ9UJT2 592 aa12.5□□□□□ -0.41
PPP4R1-216ENST00000580283 RNF166Q96A37 237 aaPredicted RBP12.49□□□□□ -0.41
PPP4R1-216ENST00000580283 PADI6Q6TGC4 694 aa12.48□□□□□ -0.41
PPP4R1-216ENST00000580283 NBPF26B4DH59 902 aa12.47□□□□□ -0.41
PPP4R1-216ENST00000580283 CFTRP13569 1480 aa12.46□□□□□ -0.41
PPP4R1-216ENST00000580283 HIC1Q14526 733 aa12.46□□□□□ -0.41
PPP4R1-216ENST00000580283 BCANQ96GW7 911 aa12.46□□□□□ -0.41
PPP4R1-216ENST00000580283 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.45□□□□□ -0.42
PPP4R1-216ENST00000580283 LAPTM4BQ86VI4 370 aa12.45□□□□□ -0.42
PPP4R1-216ENST00000580283 FAM198AQ9UFP1 575 aa12.45□□□□□ -0.42
PPP4R1-216ENST00000580283 SEPT9Q9UHD8 586 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-216ENST00000580283 PNMA3Q9UL41 463 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms