RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 CGNL1Q0VF96 1302 aa19.15■□□□□ 0.66
ITGB4-206ENST00000579662 LRRC9Q6ZRR7 1453 aa19.13■□□□□ 0.65
ITGB4-206ENST00000579662 CCDC146Q8IYE0 955 aa19.13■□□□□ 0.65
ITGB4-206ENST00000579662 GPATCH3Q96I76 525 aa19.12■□□□□ 0.65
ITGB4-206ENST00000579662 APBB1O00213 710 aa19.12■□□□□ 0.65
ITGB4-206ENST00000579662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.11■□□□□ 0.65
ITGB4-206ENST00000579662 CFTRP13569 1480 aa19.11■□□□□ 0.65
ITGB4-206ENST00000579662 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.65
ITGB4-206ENST00000579662 L1TD1Q5T7N2 865 aaKnown RBP19.1■□□□□ 0.65
ITGB4-206ENST00000579662 PLCB2Q00722 1185 aa19.1■□□□□ 0.65
ITGB4-206ENST00000579662 PRDM2Q13029 1718 aa19.1■□□□□ 0.65
ITGB4-206ENST00000579662 RBM19Q9Y4C8 960 aaKnown RBP19.09■□□□□ 0.65
ITGB4-206ENST00000579662 TAOK2Q9UL54 1235 aa19.09■□□□□ 0.65
ITGB4-206ENST00000579662 COG3Q96JB2 828 aa19.09■□□□□ 0.65
ITGB4-206ENST00000579662 CYB5RLQ6IPT4 315 aa19.07■□□□□ 0.64
ITGB4-206ENST00000579662 GBP4Q96PP9 640 aa19.07■□□□□ 0.64
ITGB4-206ENST00000579662 PRKRIP1Q9H875 184 aaPredicted RBP19.07■□□□□ 0.64
ITGB4-206ENST00000579662 NCOA2Q15596 1464 aa19.07■□□□□ 0.64
ITGB4-206ENST00000579662 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.06■□□□□ 0.64
ITGB4-206ENST00000579662 EFCAB5A4FU69 1503 aa19.06■□□□□ 0.64
ITGB4-206ENST00000579662 ZNF330Q9Y3S2 320 aaPredicted RBP19.05■□□□□ 0.64
ITGB4-206ENST00000579662 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
ITGB4-206ENST00000579662 NGEFQ8N5V2 710 aa19.05■□□□□ 0.64
ITGB4-206ENST00000579662 MRC2Q9UBG0 1479 aa19.05■□□□□ 0.64
ITGB4-206ENST00000579662 E9PSI1 815 aa19.04■□□□□ 0.64
ITGB4-206ENST00000579662 ANKRD50Q9ULJ7 1429 aa19.03■□□□□ 0.64
ITGB4-206ENST00000579662 GNL2Q13823 731 aaKnown RBP19.03■□□□□ 0.64
ITGB4-206ENST00000579662 HTATSF1O43719 755 aaKnown RBP19.03■□□□□ 0.64
ITGB4-206ENST00000579662 IFT140Q96RY7 1462 aa19.02■□□□□ 0.64
ITGB4-206ENST00000579662 SYNJ2O15056 1496 aa19.02■□□□□ 0.64
ITGB4-206ENST00000579662 GORABQ5T7V8 394 aa19.02■□□□□ 0.64
ITGB4-206ENST00000579662 MIA2Q96PC5 1412 aa19.02■□□□□ 0.64
ITGB4-206ENST00000579662 ZBED9Q6R2W3 1325 aa19.01■□□□□ 0.63
ITGB4-206ENST00000579662 SPRYD3Q8NCJ5 442 aa19.01■□□□□ 0.63
ITGB4-206ENST00000579662 TAF7LQ5H9L4 462 aa19.01■□□□□ 0.63
ITGB4-206ENST00000579662 SLC4A10Q6U841 1118 aa19.01■□□□□ 0.63
ITGB4-206ENST00000579662 TMX4Q9H1E5 349 aaPredicted RBP19■□□□□ 0.63
ITGB4-206ENST00000579662 SYNJ1O43426 1573 aa19■□□□□ 0.63
ITGB4-206ENST00000579662 CCDC9Q9Y3X0 531 aaKnown RBP19■□□□□ 0.63
ITGB4-206ENST00000579662 CLUAP1Q96AJ1 413 aa19■□□□□ 0.63
ITGB4-206ENST00000579662 LTV1Q96GA3 475 aaPredicted RBP19■□□□□ 0.63
ITGB4-206ENST00000579662 NUTM2FA1L443 756 aa18.99■□□□□ 0.63
ITGB4-206ENST00000579662 MINK1Q8N4C8 1332 aaPredicted RBP18.99■□□□□ 0.63
ITGB4-206ENST00000579662 ARHGAP5Q13017 1502 aa18.99■□□□□ 0.63
ITGB4-206ENST00000579662 CHMP3Q9Y3E7 222 aa18.98■□□□□ 0.63
ITGB4-206ENST00000579662 TULP1O00294 542 aaPredicted RBP18.98■□□□□ 0.63
ITGB4-206ENST00000579662 TRIM6-TRIM34B2RNG4 842 aa18.97■□□□□ 0.63
ITGB4-206ENST00000579662 TOP2BQ02880 1626 aa18.97■□□□□ 0.63
ITGB4-206ENST00000579662 MFAP1P55081 439 aaKnown RBP18.97■□□□□ 0.63
ITGB4-206ENST00000579662 ZNF644Q9H582 1327 aaPredicted RBP18.97■□□□□ 0.63
ITGB4-206ENST00000579662 EHBP1L1Q8N3D4 1523 aa18.96■□□□□ 0.63
ITGB4-206ENST00000579662 C1orf141Q5JVX7 400 aa18.96■□□□□ 0.63
ITGB4-206ENST00000579662 FAM69CQ0P6D2 419 aa18.96■□□□□ 0.63
ITGB4-206ENST00000579662 CENPQQ7L2Z9 268 aaPredicted RBP18.96■□□□□ 0.63
ITGB4-206ENST00000579662 RRP7AQ9Y3A4 280 aaKnown RBP18.96■□□□□ 0.63
ITGB4-206ENST00000579662 CHAF1AQ13111 956 aaPredicted RBP18.95■□□□□ 0.62
ITGB4-206ENST00000579662 ZKSCAN2Q63HK3 967 aa18.95■□□□□ 0.62
ITGB4-206ENST00000579662 SYAP1Q96A49 352 aaPredicted RBP18.95■□□□□ 0.62
ITGB4-206ENST00000579662 NAP1L5Q96NT1 182 aaPredicted RBP18.95■□□□□ 0.62
ITGB4-206ENST00000579662 DIAPH1O60610 1272 aaKnown RBP18.93■□□□□ 0.62
ITGB4-206ENST00000579662 ISY1Q9ULR0 285 aaKnown RBP18.93■□□□□ 0.62
ITGB4-206ENST00000579662 PLEKHH2Q8IVE3 1493 aa18.93■□□□□ 0.62
ITGB4-206ENST00000579662 MSNP26038 577 aaKnown RBP18.93■□□□□ 0.62
ITGB4-206ENST00000579662 PRG4Q92954 1404 aaPredicted RBP18.93■□□□□ 0.62
ITGB4-206ENST00000579662 RRBP1Q9P2E9 1410 aaKnown RBP18.93■□□□□ 0.62
ITGB4-206ENST00000579662 CCDC7Q96M83 1385 aa18.92■□□□□ 0.62
ITGB4-206ENST00000579662 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
ITGB4-206ENST00000579662 ARAP1Q96P48 1450 aa18.92■□□□□ 0.62
ITGB4-206ENST00000579662 RRP1P56182 461 aaKnown RBP18.91■□□□□ 0.62
ITGB4-206ENST00000579662 CC2D2AQ9P2K1 1620 aa18.91■□□□□ 0.62
ITGB4-206ENST00000579662 CSPP1Q1MSJ5 1256 aa18.9■□□□□ 0.62
ITGB4-206ENST00000579662 DRC7Q8IY82 874 aa18.9■□□□□ 0.62
ITGB4-206ENST00000579662 IPO9Q96P70 1041 aaKnown RBP18.9■□□□□ 0.62
ITGB4-206ENST00000579662 PRXQ9BXM0 1461 aa18.9■□□□□ 0.62
ITGB4-206ENST00000579662 HECW1Q76N89 1606 aa18.89■□□□□ 0.61
ITGB4-206ENST00000579662 CNTLNQ9NXG0 1405 aa18.89■□□□□ 0.61
ITGB4-206ENST00000579662 TEFQ10587 303 aa18.89■□□□□ 0.61
ITGB4-206ENST00000579662 SLKQ9H2G2 1235 aaPredicted RBP18.88■□□□□ 0.61
ITGB4-206ENST00000579662 ST18O60284 1047 aa18.88■□□□□ 0.61
ITGB4-206ENST00000579662 HSP90B1P14625 803 aaKnown RBP18.87■□□□□ 0.61
ITGB4-206ENST00000579662 CCDC34Q96HJ3 373 aa18.87■□□□□ 0.61
ITGB4-206ENST00000579662 KIF7Q2M1P5 1343 aa18.87■□□□□ 0.61
ITGB4-206ENST00000579662 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
ITGB4-206ENST00000579662 HFM1A2PYH4 1435 aa18.86■□□□□ 0.61
ITGB4-206ENST00000579662 APAF1O14727 1248 aa18.86■□□□□ 0.61
ITGB4-206ENST00000579662 RUNDC1Q96C34 613 aa18.86■□□□□ 0.61
ITGB4-206ENST00000579662 NESP48681 1621 aa18.86■□□□□ 0.61
ITGB4-206ENST00000579662 POLA1P09884 1462 aaPredicted RBP18.86■□□□□ 0.61
ITGB4-206ENST00000579662 ROCK1Q13464 1354 aa18.85■□□□□ 0.61
ITGB4-206ENST00000579662 KIF3AQ9Y496 699 aa18.84■□□□□ 0.61
ITGB4-206ENST00000579662 API5Q9BZZ5 524 aaKnown RBP18.84■□□□□ 0.61
ITGB4-206ENST00000579662 DDX19BQ9UMR2 479 aa18.84■□□□□ 0.61
ITGB4-206ENST00000579662 TTC5Q8N0Z6 440 aa18.84■□□□□ 0.61
ITGB4-206ENST00000579662 EVA1CP58658 441 aa18.84■□□□□ 0.61
ITGB4-206ENST00000579662 DEKP35659 375 aaKnown RBP18.83■□□□□ 0.61
ITGB4-206ENST00000579662 CHMP4CQ96CF2 233 aa18.83■□□□□ 0.61
ITGB4-206ENST00000579662 TPM4P67936 248 aa18.83■□□□□ 0.6
ITGB4-206ENST00000579662 NEXNQ0ZGT2 675 aa18.83■□□□□ 0.6
ITGB4-206ENST00000579662 FAM161AQ3B820 660 aa18.83■□□□□ 0.6
ITGB4-206ENST00000579662 TSHZ2Q9NRE2 1034 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms