RNA–Protein interactions for RNA: ENST00000574544.1

ABR-229, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5

Gene ABR, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-229ENST00000574544 PTPRKQ15262 1439 aa13.54□□□□□ -0.24
ABR-229ENST00000574544 TCOF1Q13428 1488 aaKnown RBP13.54□□□□□ -0.24
ABR-229ENST00000574544 PLXNC1O60486 1568 aa13.54□□□□□ -0.24
ABR-229ENST00000574544 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
ABR-229ENST00000574544 THEMISQ8N1K5 641 aaPredicted RBP13.52□□□□□ -0.25
ABR-229ENST00000574544 TNRQ92752 1358 aa13.52□□□□□ -0.25
ABR-229ENST00000574544 NPATQ14207 1427 aa13.52□□□□□ -0.25
ABR-229ENST00000574544 NCOA1Q15788 1441 aa13.52□□□□□ -0.25
ABR-229ENST00000574544 C3P01024 1663 aa13.52□□□□□ -0.25
ABR-229ENST00000574544 CLTCQ00610 1675 aaKnown RBP13.52□□□□□ -0.25
ABR-229ENST00000574544 DUOX2Q9NRD8 1548 aa13.51□□□□□ -0.25
ABR-229ENST00000574544 SETD1BQ9UPS6 1966 aaKnown RBP13.5□□□□□ -0.25
ABR-229ENST00000574544 MAST1Q9Y2H9 1570 aa13.49□□□□□ -0.25
ABR-229ENST00000574544 PKD2Q13563 968 aa13.49□□□□□ -0.25
ABR-229ENST00000574544 ANKLE2Q86XL3 938 aa13.49□□□□□ -0.25
ABR-229ENST00000574544 CERKQ8TCT0 537 aa13.49□□□□□ -0.25
ABR-229ENST00000574544 SHANK2Q9UPX8 1470 aa13.47□□□□□ -0.25
ABR-229ENST00000574544 ERBINQ96RT1 1412 aa13.47□□□□□ -0.25
ABR-229ENST00000574544 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
ABR-229ENST00000574544 DNMT1P26358 1616 aaKnown RBP13.46□□□□□ -0.25
ABR-229ENST00000574544 KDM5DQ9BY66 1539 aa13.46□□□□□ -0.25
ABR-229ENST00000574544 PREX1Q8TCU6 1659 aa13.46□□□□□ -0.26
ABR-229ENST00000574544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
ABR-229ENST00000574544 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
ABR-229ENST00000574544 FBXO41Q8TF61 875 aa13.45□□□□□ -0.26
ABR-229ENST00000574544 TRIM52Q96A61 297 aa13.45□□□□□ -0.26
ABR-229ENST00000574544 PZPP20742 1482 aa13.44□□□□□ -0.26
ABR-229ENST00000574544 IDI1Q13907 227 aa13.44□□□□□ -0.26
ABR-229ENST00000574544 BCANQ96GW7 911 aa13.44□□□□□ -0.26
ABR-229ENST00000574544 SENP3Q9H4L4 574 aaPredicted RBP13.44□□□□□ -0.26
ABR-229ENST00000574544 TXNDC2Q86VQ3 553 aa13.43□□□□□ -0.26
ABR-229ENST00000574544 MROH2AA6NES4 1674 aa13.43□□□□□ -0.26
ABR-229ENST00000574544 CAMSAP1Q5T5Y3 1602 aa13.42□□□□□ -0.26
ABR-229ENST00000574544 ABCC3O15438 1527 aa13.42□□□□□ -0.26
ABR-229ENST00000574544 NUP155O75694 1391 aa13.42□□□□□ -0.26
ABR-229ENST00000574544 A2ML1A8K2U0 1454 aa13.42□□□□□ -0.26
ABR-229ENST00000574544 EID1Q9Y6B2 187 aa13.41□□□□□ -0.26
ABR-229ENST00000574544 PTPRTO14522 1441 aa13.4□□□□□ -0.26
ABR-229ENST00000574544 ROCK1Q13464 1354 aa13.4□□□□□ -0.26
ABR-229ENST00000574544 ADGRL2O95490 1459 aa13.4□□□□□ -0.26
ABR-229ENST00000574544 ZNF335Q9H4Z2 1342 aaPredicted RBP13.39□□□□□ -0.27
ABR-229ENST00000574544 SLC52A1Q9NWF4 448 aa13.38□□□□□ -0.27
ABR-229ENST00000574544 EIF2AK4Q9P2K8 1649 aaKnown RBP13.38□□□□□ -0.27
ABR-229ENST00000574544 FAM135AQ9P2D6 1515 aa13.38□□□□□ -0.27
ABR-229ENST00000574544 CEP170BQ9Y4F5 1589 aaPredicted RBP13.37□□□□□ -0.27
ABR-229ENST00000574544 ERVK-7P63135 1459 aa13.37□□□□□ -0.27
ABR-229ENST00000574544 LTKP29376 864 aa13.37□□□□□ -0.27
ABR-229ENST00000574544 NLRP1Q9C000 1473 aa13.36□□□□□ -0.27
ABR-229ENST00000574544 CFAP65Q6ZU64 1925 aaKnown RBP13.36□□□□□ -0.27
ABR-229ENST00000574544 CROCC2H7BZ55 1655 aa13.36□□□□□ -0.27
ABR-229ENST00000574544 ARHGAP31Q2M1Z3 1444 aa13.36□□□□□ -0.27
ABR-229ENST00000574544 RRBP1Q9P2E9 1410 aaKnown RBP13.36□□□□□ -0.27
ABR-229ENST00000574544 UGGT1Q9NYU2 1555 aa13.36□□□□□ -0.27
ABR-229ENST00000574544 RNF17Q9BXT8 1623 aaKnown RBP13.35□□□□□ -0.27
ABR-229ENST00000574544 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
ABR-229ENST00000574544 STRCQ7RTU9 1775 aa13.35□□□□□ -0.27
ABR-229ENST00000574544 NUTM2DQ5VT03 806 aaPredicted RBP13.34□□□□□ -0.27
ABR-229ENST00000574544 MROH1Q8NDA8 1641 aa13.34□□□□□ -0.27
ABR-229ENST00000574544 MYO3AQ8NEV4 1616 aa13.34□□□□□ -0.27
ABR-229ENST00000574544 PLA2R1Q13018 1463 aa13.34□□□□□ -0.27
ABR-229ENST00000574544 PPP1R15AO75807 674 aaPredicted RBP13.33□□□□□ -0.28
ABR-229ENST00000574544 CEP152O94986 1710 aa13.33□□□□□ -0.28
ABR-229ENST00000574544 UBAP1LF5GYI3 381 aa13.32□□□□□ -0.28
ABR-229ENST00000574544 SLC26A8Q96RN1 970 aa13.32□□□□□ -0.28
ABR-229ENST00000574544 SLC4A1APQ9BWU0 796 aaKnown RBP13.32□□□□□ -0.28
ABR-229ENST00000574544 NPHP4O75161 1426 aaPredicted RBP13.31□□□□□ -0.28
ABR-229ENST00000574544 PRDM15P57071 1507 aaPredicted RBP13.31□□□□□ -0.28
ABR-229ENST00000574544 ZNF326Q5BKZ1 582 aaKnown RBP13.31□□□□□ -0.28
ABR-229ENST00000574544 SPATA31D1Q6ZQQ2 1576 aa13.31□□□□□ -0.28
ABR-229ENST00000574544 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
ABR-229ENST00000574544 ZC3H13Q5T200 1668 aaKnown RBP13.29□□□□□ -0.28
ABR-229ENST00000574544 LMTK2Q8IWU2 1503 aa13.29□□□□□ -0.28
ABR-229ENST00000574544 PIP4K2BP78356 416 aa13.28□□□□□ -0.28
ABR-229ENST00000574544 TMEM2Q9UHN6 1383 aa13.28□□□□□ -0.28
ABR-229ENST00000574544 NAIPQ13075 1403 aa13.28□□□□□ -0.28
ABR-229ENST00000574544 FOXD1Q16676 465 aa13.27□□□□□ -0.29
ABR-229ENST00000574544 NOS1P29475 1434 aa13.27□□□□□ -0.29
ABR-229ENST00000574544 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.26□□□□□ -0.29
ABR-229ENST00000574544 DEPDC5O75140 1603 aa13.25□□□□□ -0.29
ABR-229ENST00000574544 VWDEQ8N2E2 1590 aa13.25□□□□□ -0.29
ABR-229ENST00000574544 TOM1O60784 492 aa13.25□□□□□ -0.29
ABR-229ENST00000574544 RBM33Q96EV2 1170 aaKnown RBP13.25□□□□□ -0.29
ABR-229ENST00000574544 ZNF142P52746 1687 aaPredicted RBP13.24□□□□□ -0.29
ABR-229ENST00000574544 PROSER2Q86WR7 435 aaPredicted RBP13.24□□□□□ -0.29
ABR-229ENST00000574544 SCAF11Q99590 1463 aaKnown RBP13.23□□□□□ -0.29
ABR-229ENST00000574544 MPHOSPH9Q99550 1183 aa13.23□□□□□ -0.29
ABR-229ENST00000574544 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
ABR-229ENST00000574544 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
ABR-229ENST00000574544 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
ABR-229ENST00000574544 LTBP4Q8N2S1 1624 aa13.21□□□□□ -0.29
ABR-229ENST00000574544 KCNA6P17658 529 aa13.21□□□□□ -0.29
ABR-229ENST00000574544 RGL3Q3MIN7 710 aa13.21□□□□□ -0.29
ABR-229ENST00000574544 MED14O60244 1454 aa13.21□□□□□ -0.3
ABR-229ENST00000574544 RIMS2Q9UQ26 1411 aa13.21□□□□□ -0.3
ABR-229ENST00000574544 PIK3C2BO00750 1634 aa13.21□□□□□ -0.3
ABR-229ENST00000574544 ARHGAP23Q9P227 1491 aa13.19□□□□□ -0.3
ABR-229ENST00000574544 C14orf37Q86TY3 774 aa13.19□□□□□ -0.3
ABR-229ENST00000574544 UNC13BO14795 1591 aa13.19□□□□□ -0.3
ABR-229ENST00000574544 SYNMO15061 1565 aa13.19□□□□□ -0.3
ABR-229ENST00000574544 TET3O43151 1660 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms