RNA–Protein interactions for RNA: ENST00000573023.6

SLC12A4-212, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-212ENST00000573023 ARID4BQ4LE39 1312 aaPredicted RBP24.91■■□□□ 1.58
SLC12A4-212ENST00000573023 CANXP27824 592 aaKnown RBP24.9■■□□□ 1.58
SLC12A4-212ENST00000573023 EXOC6Q8TAG9 804 aa24.9■■□□□ 1.58
SLC12A4-212ENST00000573023 TEX14Q8IWB6 1497 aa24.89■■□□□ 1.57
SLC12A4-212ENST00000573023 CDCA7LQ96GN5 454 aa24.89■■□□□ 1.57
SLC12A4-212ENST00000573023 EIF4G3O43432 1585 aaKnown RBP24.87■■□□□ 1.57
SLC12A4-212ENST00000573023 NEUROD2Q15784 382 aa24.86■■□□□ 1.57
SLC12A4-212ENST00000573023 CDCA8Q53HL2 280 aa24.86■■□□□ 1.57
SLC12A4-212ENST00000573023 ARHGAP5Q13017 1502 aa24.85■■□□□ 1.57
SLC12A4-212ENST00000573023 DNMT1P26358 1616 aaKnown RBP24.85■■□□□ 1.57
SLC12A4-212ENST00000573023 MSH5O43196 834 aa24.84■■□□□ 1.57
SLC12A4-212ENST00000573023 NOP58Q9Y2X3 529 aaKnown RBP24.83■■□□□ 1.57
SLC12A4-212ENST00000573023 KDM5BQ9UGL1 1544 aa24.82■■□□□ 1.56
SLC12A4-212ENST00000573023 GGT6Q6P531 493 aa24.82■■□□□ 1.56
SLC12A4-212ENST00000573023 GCC2Q8IWJ2 1684 aa24.81■■□□□ 1.56
SLC12A4-212ENST00000573023 RRP1P56182 461 aaKnown RBP24.81■■□□□ 1.56
SLC12A4-212ENST00000573023 KIF14Q15058 1648 aa24.8■■□□□ 1.56
SLC12A4-212ENST00000573023 CCDC146Q8IYE0 955 aa24.8■■□□□ 1.56
SLC12A4-212ENST00000573023 SPATA31E1Q6ZUB1 1445 aa24.8■■□□□ 1.56
SLC12A4-212ENST00000573023 FANCIQ9NVI1 1328 aa24.8■■□□□ 1.56
SLC12A4-212ENST00000573023 DHX29Q7Z478 1369 aaKnown RBP24.78■■□□□ 1.56
SLC12A4-212ENST00000573023 BRD4O60885 1362 aaPredicted RBP24.77■■□□□ 1.56
SLC12A4-212ENST00000573023 CCDC141Q6ZP82 1450 aa24.75■■□□□ 1.55
SLC12A4-212ENST00000573023 SMG6Q86US8 1419 aaKnown RBP24.74■■□□□ 1.55
SLC12A4-212ENST00000573023 CEP170Q5SW79 1584 aa24.74■■□□□ 1.55
SLC12A4-212ENST00000573023 KANK1Q14678 1352 aa24.74■■□□□ 1.55
SLC12A4-212ENST00000573023 NUTM2DQ5VT03 806 aaPredicted RBP24.74■■□□□ 1.55
SLC12A4-212ENST00000573023 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.73■■□□□ 1.55
SLC12A4-212ENST00000573023 ADAMTS8Q9UP79 889 aa24.73■■□□□ 1.55
SLC12A4-212ENST00000573023 SAFB2Q14151 953 aaKnown RBP eCLIP24.72■■□□□ 1.55
SLC12A4-212ENST00000573023 PDE3BQ13370 1112 aa24.72■■□□□ 1.55
SLC12A4-212ENST00000573023 PLEKHH2Q8IVE3 1493 aa24.71■■□□□ 1.55
SLC12A4-212ENST00000573023 NUP160Q12769 1436 aa24.7■■□□□ 1.55
SLC12A4-212ENST00000573023 RGS3P49796 1198 aa24.7■■□□□ 1.54
SLC12A4-212ENST00000573023 LAS1LQ9Y4W2 734 aaKnown RBP24.69■■□□□ 1.54
SLC12A4-212ENST00000573023 TRAK1Q9UPV9 953 aa24.67■■□□□ 1.54
SLC12A4-212ENST00000573023 CRBNQ96SW2 442 aa24.67■■□□□ 1.54
SLC12A4-212ENST00000573023 CFAP70Q5T0N1 1121 aa24.66■■□□□ 1.54
SLC12A4-212ENST00000573023 ITSN2Q9NZM3 1697 aa24.64■■□□□ 1.54
SLC12A4-212ENST00000573023 ADGRL2O95490 1459 aa24.63■■□□□ 1.53
SLC12A4-212ENST00000573023 FRAT1Q92837 279 aaPredicted RBP24.63■■□□□ 1.53
SLC12A4-212ENST00000573023 RALGAPBQ86X10 1494 aa24.63■■□□□ 1.53
SLC12A4-212ENST00000573023 GOLGA2Q08379 1002 aa24.62■■□□□ 1.53
SLC12A4-212ENST00000573023 DISP3Q9P2K9 1392 aa24.62■■□□□ 1.53
SLC12A4-212ENST00000573023 BCL11AQ9H165 835 aa24.62■■□□□ 1.53
SLC12A4-212ENST00000573023 STAG3Q9UJ98 1225 aa24.62■■□□□ 1.53
SLC12A4-212ENST00000573023 APAF1O14727 1248 aa24.61■■□□□ 1.53
SLC12A4-212ENST00000573023 IPO9Q96P70 1041 aaKnown RBP24.6■■□□□ 1.53
SLC12A4-212ENST00000573023 PAK3O75914 559 aaPredicted RBP24.6■■□□□ 1.53
SLC12A4-212ENST00000573023 SKAP1Q86WV1 359 aa24.6■■□□□ 1.53
SLC12A4-212ENST00000573023 MORC1Q86VD1 984 aa24.59■■□□□ 1.53
SLC12A4-212ENST00000573023 ERBINQ96RT1 1412 aa24.59■■□□□ 1.53
SLC12A4-212ENST00000573023 TCERG1O14776 1098 aaKnown RBP24.59■■□□□ 1.53
SLC12A4-212ENST00000573023 PPP2R1AP30153 589 aa24.59■■□□□ 1.53
SLC12A4-212ENST00000573023 STK26Q9P289 416 aa24.58■■□□□ 1.53
SLC12A4-212ENST00000573023 SYCP2Q9BX26 1530 aa24.57■■□□□ 1.52
SLC12A4-212ENST00000573023 TESK2Q96S53 571 aa24.57■■□□□ 1.52
SLC12A4-212ENST00000573023 PDE4AP27815 886 aa24.56■■□□□ 1.52
SLC12A4-212ENST00000573023 FAM135AQ9P2D6 1515 aa24.55■■□□□ 1.52
SLC12A4-212ENST00000573023 RRP7AQ9Y3A4 280 aaKnown RBP24.55■■□□□ 1.52
SLC12A4-212ENST00000573023 SCAPERQ9BY12 1400 aa24.54■■□□□ 1.52
SLC12A4-212ENST00000573023 ABCC10Q5T3U5 1492 aa24.54■■□□□ 1.52
SLC12A4-212ENST00000573023 PRAG1Q86YV5 1406 aa24.54■■□□□ 1.52
SLC12A4-212ENST00000573023 PER1O15534 1290 aaPredicted RBP24.54■■□□□ 1.52
SLC12A4-212ENST00000573023 DEKP35659 375 aaKnown RBP24.53■■□□□ 1.52
SLC12A4-212ENST00000573023 TMEM132EQ6IEE7 984 aa24.53■■□□□ 1.52
SLC12A4-212ENST00000573023 UHRF1BP1Q6BDS2 1440 aa24.52■■□□□ 1.52
SLC12A4-212ENST00000573023 WASHC2CQ9Y4E1 1318 aa24.51■■□□□ 1.51
SLC12A4-212ENST00000573023 MBD5Q9P267 1494 aa24.51■■□□□ 1.51
SLC12A4-212ENST00000573023 EIF3AQ14152 1382 aaKnown RBP24.5■■□□□ 1.51
SLC12A4-212ENST00000573023 SHANK2Q9UPX8 1470 aa24.49■■□□□ 1.51
SLC12A4-212ENST00000573023 PPM1GO15355 546 aaPredicted RBP24.48■■□□□ 1.51
SLC12A4-212ENST00000573023 C20orf194Q5TEA3 1177 aa24.48■■□□□ 1.51
SLC12A4-212ENST00000573023 U2SURPO15042 1029 aaKnown RBP24.47■■□□□ 1.51
SLC12A4-212ENST00000573023 NEFMP07197 916 aa24.47■■□□□ 1.51
SLC12A4-212ENST00000573023 CFAP53Q96M91 514 aa24.47■■□□□ 1.51
SLC12A4-212ENST00000573023 SRPK2P78362 688 aaKnown RBP24.45■■□□□ 1.5
SLC12A4-212ENST00000573023 TRAPPC8Q9Y2L5 1435 aa24.45■■□□□ 1.5
SLC12A4-212ENST00000573023 SLC24A1O60721 1099 aa24.45■■□□□ 1.5
SLC12A4-212ENST00000573023 ABCA8O94911 1581 aa24.43■■□□□ 1.5
SLC12A4-212ENST00000573023 SLC4A3P48751 1232 aa24.43■■□□□ 1.5
SLC12A4-212ENST00000573023 BCL2L13Q9BXK5 485 aa24.43■■□□□ 1.5
SLC12A4-212ENST00000573023 PARD3Q8TEW0 1356 aa24.42■■□□□ 1.5
SLC12A4-212ENST00000573023 U2AF1L5P0DN76 240 aaPredicted RBP24.42■■□□□ 1.5
SLC12A4-212ENST00000573023 U2AF1Q01081 240 aaKnown RBP eCLIP24.42■■□□□ 1.5
SLC12A4-212ENST00000573023 ARHGEF12Q9NZN5 1544 aa24.42■■□□□ 1.5
SLC12A4-212ENST00000573023 SLC12A5Q9H2X9 1139 aa24.41■■□□□ 1.5
SLC12A4-212ENST00000573023 POGKQ9P215 609 aa24.41■■□□□ 1.5
SLC12A4-212ENST00000573023 CLUAP1Q96AJ1 413 aa24.41■■□□□ 1.5
SLC12A4-212ENST00000573023 A2MP01023 1474 aa24.41■■□□□ 1.5
SLC12A4-212ENST00000573023 ADGRF5Q8IZF2 1346 aa24.41■■□□□ 1.5
SLC12A4-212ENST00000573023 BCORL1Q5H9F3 1711 aa24.4■■□□□ 1.5
SLC12A4-212ENST00000573023 LRPPRCP42704 1394 aaKnown RBP24.38■■□□□ 1.49
SLC12A4-212ENST00000573023 ADGBQ8N7X0 1667 aa24.38■■□□□ 1.49
SLC12A4-212ENST00000573023 CENPJQ9HC77 1338 aaPredicted RBP24.38■■□□□ 1.49
SLC12A4-212ENST00000573023 PLCH2O75038 1416 aa24.37■■□□□ 1.49
SLC12A4-212ENST00000573023 KDM5CP41229 1560 aa24.37■■□□□ 1.49
SLC12A4-212ENST00000573023 BCAR3O75815 825 aa24.36■■□□□ 1.49
SLC12A4-212ENST00000573023 PLPPR3Q6T4P5 718 aa24.36■■□□□ 1.49
SLC12A4-212ENST00000573023 DDRGK1Q96HY6 314 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms