RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 ARHGEF11O15085 1522 aa26.69■■□□□ 1.86
SCRT1-201ENST00000569446 CLUAP1Q96AJ1 413 aa26.68■■□□□ 1.86
SCRT1-201ENST00000569446 C9orf84Q5VXU9 1444 aa26.67■■□□□ 1.86
SCRT1-201ENST00000569446 APAF1O14727 1248 aa26.67■■□□□ 1.86
SCRT1-201ENST00000569446 EFCAB2Q5VUJ9 269 aa26.66■■□□□ 1.86
SCRT1-201ENST00000569446 TRAK1Q9UPV9 953 aa26.66■■□□□ 1.86
SCRT1-201ENST00000569446 STK26Q9P289 416 aa26.65■■□□□ 1.86
SCRT1-201ENST00000569446 C20orf194Q5TEA3 1177 aa26.64■■□□□ 1.86
SCRT1-201ENST00000569446 SPRYD3Q8NCJ5 442 aa26.64■■□□□ 1.85
SCRT1-201ENST00000569446 CAMSAP2Q08AD1 1489 aa26.64■■□□□ 1.85
SCRT1-201ENST00000569446 MRC2Q9UBG0 1479 aa26.63■■□□□ 1.85
SCRT1-201ENST00000569446 KIAA0586Q9BVV6 1533 aa26.61■■□□□ 1.85
SCRT1-201ENST00000569446 SPAG9O60271 1321 aaKnown RBP26.61■■□□□ 1.85
SCRT1-201ENST00000569446 NPM1P06748 294 aaKnown RBP eCLIP26.6■■□□□ 1.85
SCRT1-201ENST00000569446 NUP153P49790 1475 aaKnown RBP26.6■■□□□ 1.85
SCRT1-201ENST00000569446 CTTNBP2Q8WZ74 1663 aa26.6■■□□□ 1.85
SCRT1-201ENST00000569446 ROCK1Q13464 1354 aa26.6■■□□□ 1.85
SCRT1-201ENST00000569446 U2SURPO15042 1029 aaKnown RBP26.6■■□□□ 1.85
SCRT1-201ENST00000569446 STAG3Q9UJ98 1225 aa26.59■■□□□ 1.85
SCRT1-201ENST00000569446 TCERG1O14776 1098 aaKnown RBP26.59■■□□□ 1.85
SCRT1-201ENST00000569446 GOLGA2Q08379 1002 aa26.59■■□□□ 1.85
SCRT1-201ENST00000569446 CDCA8Q53HL2 280 aa26.57■■□□□ 1.84
SCRT1-201ENST00000569446 MORC1Q86VD1 984 aa26.56■■□□□ 1.84
SCRT1-201ENST00000569446 EIF5BO60841 1220 aaKnown RBP26.55■■□□□ 1.84
SCRT1-201ENST00000569446 CFAP70Q5T0N1 1121 aa26.55■■□□□ 1.84
SCRT1-201ENST00000569446 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
SCRT1-201ENST00000569446 SMG6Q86US8 1419 aaKnown RBP26.54■■□□□ 1.84
SCRT1-201ENST00000569446 GPATCH8Q9UKJ3 1502 aaKnown RBP26.53■■□□□ 1.84
SCRT1-201ENST00000569446 SLC24A1O60721 1099 aa26.52■■□□□ 1.84
SCRT1-201ENST00000569446 TMEM132EQ6IEE7 984 aa26.51■■□□□ 1.83
SCRT1-201ENST00000569446 SLKQ9H2G2 1235 aaPredicted RBP26.5■■□□□ 1.83
SCRT1-201ENST00000569446 COG6Q9Y2V7 657 aa26.5■■□□□ 1.83
SCRT1-201ENST00000569446 BRD4O60885 1362 aaPredicted RBP26.5■■□□□ 1.83
SCRT1-201ENST00000569446 GRIN2AQ12879 1464 aa26.49■■□□□ 1.83
SCRT1-201ENST00000569446 DHX29Q7Z478 1369 aaKnown RBP26.49■■□□□ 1.83
SCRT1-201ENST00000569446 PDE3BQ13370 1112 aa26.49■■□□□ 1.83
SCRT1-201ENST00000569446 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
SCRT1-201ENST00000569446 DENND4BO75064 1496 aaPredicted RBP26.48■■□□□ 1.83
SCRT1-201ENST00000569446 BCAR3O75815 825 aa26.47■■□□□ 1.83
SCRT1-201ENST00000569446 U2AF1L5P0DN76 240 aaPredicted RBP26.46■■□□□ 1.83
SCRT1-201ENST00000569446 U2AF1Q01081 240 aaKnown RBP eCLIP26.46■■□□□ 1.83
SCRT1-201ENST00000569446 PPP2R1AP30153 589 aa26.46■■□□□ 1.83
SCRT1-201ENST00000569446 RSPH4AQ5TD94 716 aa26.45■■□□□ 1.83
SCRT1-201ENST00000569446 TCOF1Q13428 1488 aaKnown RBP26.43■■□□□ 1.82
SCRT1-201ENST00000569446 PLEKHG5O94827 1062 aa26.43■■□□□ 1.82
SCRT1-201ENST00000569446 DISP3Q9P2K9 1392 aa26.43■■□□□ 1.82
SCRT1-201ENST00000569446 DDRGK1Q96HY6 314 aa26.43■■□□□ 1.82
SCRT1-201ENST00000569446 SRPK2P78362 688 aaKnown RBP26.42■■□□□ 1.82
SCRT1-201ENST00000569446 PZPP20742 1482 aa26.42■■□□□ 1.82
SCRT1-201ENST00000569446 PANK1Q8TE04 598 aa26.42■■□□□ 1.82
SCRT1-201ENST00000569446 FTSJ3Q8IY81 847 aaKnown RBP26.41■■□□□ 1.82
SCRT1-201ENST00000569446 UPF2Q9HAU5 1272 aaKnown RBP26.41■■□□□ 1.82
SCRT1-201ENST00000569446 ARID4BQ4LE39 1312 aaPredicted RBP26.41■■□□□ 1.82
SCRT1-201ENST00000569446 TEX14Q8IWB6 1497 aa26.4■■□□□ 1.82
SCRT1-201ENST00000569446 WDR62O43379 1518 aa26.39■■□□□ 1.81
SCRT1-201ENST00000569446 SAMD9Q5K651 1589 aa26.38■■□□□ 1.81
SCRT1-201ENST00000569446 ARHGAP5Q13017 1502 aa26.38■■□□□ 1.81
SCRT1-201ENST00000569446 MAGI1Q96QZ7 1491 aaPredicted RBP26.38■■□□□ 1.81
SCRT1-201ENST00000569446 MLECQ14165 292 aa26.37■■□□□ 1.81
SCRT1-201ENST00000569446 DISP1Q96F81 1524 aa26.37■■□□□ 1.81
SCRT1-201ENST00000569446 SOX12O15370 315 aa26.35■■□□□ 1.81
SCRT1-201ENST00000569446 SLC12A5Q9H2X9 1139 aa26.35■■□□□ 1.81
SCRT1-201ENST00000569446 ABCA5Q8WWZ7 1642 aa26.35■■□□□ 1.81
SCRT1-201ENST00000569446 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.34■■□□□ 1.81
SCRT1-201ENST00000569446 CFAP53Q96M91 514 aa26.34■■□□□ 1.81
SCRT1-201ENST00000569446 BACH2Q9BYV9 841 aa26.34■■□□□ 1.81
SCRT1-201ENST00000569446 SPATA31E1Q6ZUB1 1445 aa26.34■■□□□ 1.81
SCRT1-201ENST00000569446 POGKQ9P215 609 aa26.33■■□□□ 1.81
SCRT1-201ENST00000569446 KANK1Q14678 1352 aa26.33■■□□□ 1.8
SCRT1-201ENST00000569446 ATP10BO94823 1461 aa26.31■■□□□ 1.8
SCRT1-201ENST00000569446 PLEKHH2Q8IVE3 1493 aa26.31■■□□□ 1.8
SCRT1-201ENST00000569446 SYNJ2O15056 1496 aa26.31■■□□□ 1.8
SCRT1-201ENST00000569446 IL27Q8NEV9 243 aa26.31■■□□□ 1.8
SCRT1-201ENST00000569446 HSP90AA1P07900 732 aaKnown RBP26.3■■□□□ 1.8
SCRT1-201ENST00000569446 CENPJQ9HC77 1338 aaPredicted RBP26.29■■□□□ 1.8
SCRT1-201ENST00000569446 ERBINQ96RT1 1412 aa26.28■■□□□ 1.8
SCRT1-201ENST00000569446 KDM5BQ9UGL1 1544 aa26.27■■□□□ 1.8
SCRT1-201ENST00000569446 ELL2O00472 640 aaPredicted RBP26.27■■□□□ 1.8
SCRT1-201ENST00000569446 TESK2Q96S53 571 aa26.27■■□□□ 1.8
SCRT1-201ENST00000569446 PER1O15534 1290 aaPredicted RBP26.26■■□□□ 1.79
SCRT1-201ENST00000569446 GZF1Q9H116 711 aaPredicted RBP26.26■■□□□ 1.79
SCRT1-201ENST00000569446 WASHC2CQ9Y4E1 1318 aa26.25■■□□□ 1.79
SCRT1-201ENST00000569446 RAPGEF6Q8TEU7 1601 aa26.25■■□□□ 1.79
SCRT1-201ENST00000569446 CENPQQ7L2Z9 268 aaPredicted RBP26.24■■□□□ 1.79
SCRT1-201ENST00000569446 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
SCRT1-201ENST00000569446 MAPK8IP3Q9UPT6 1336 aa26.24■■□□□ 1.79
SCRT1-201ENST00000569446 FAM161AQ3B820 660 aa26.22■■□□□ 1.79
SCRT1-201ENST00000569446 KIF14Q15058 1648 aa26.22■■□□□ 1.79
SCRT1-201ENST00000569446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.22■■□□□ 1.79
SCRT1-201ENST00000569446 CABP2Q9NPB3 220 aa26.21■■□□□ 1.79
SCRT1-201ENST00000569446 KIAA0556O60303 1618 aa26.21■■□□□ 1.79
SCRT1-201ENST00000569446 MTHFSP49914 203 aa26.21■■□□□ 1.79
SCRT1-201ENST00000569446 ITPRIPQ8IWB1 547 aa26.21■■□□□ 1.79
SCRT1-201ENST00000569446 NUTM2FA1L443 756 aa26.2■■□□□ 1.79
SCRT1-201ENST00000569446 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
SCRT1-201ENST00000569446 SPINK5Q9NQ38 1064 aaPredicted RBP26.2■■□□□ 1.78
SCRT1-201ENST00000569446 GGNBP2Q9H3C7 697 aa26.19■■□□□ 1.78
SCRT1-201ENST00000569446 MINK1Q8N4C8 1332 aaPredicted RBP26.18■■□□□ 1.78
SCRT1-201ENST00000569446 SCAPERQ9BY12 1400 aa26.18■■□□□ 1.78
SCRT1-201ENST00000569446 APBB1O00213 710 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms