RNA–Protein interactions for RNA: ENST00000569075.5

TMEM87A-213, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,369 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-213ENST00000569075 VPS9D1Q9Y2B5 631 aa9.22□□□□□ -0.93
TMEM87A-213ENST00000569075 COL9A1P20849 921 aa9.21□□□□□ -0.94
TMEM87A-213ENST00000569075 PDIA6Q15084 440 aa9.21□□□□□ -0.94
TMEM87A-213ENST00000569075 DDX12PQ92771 950 aa9.21□□□□□ -0.94
TMEM87A-213ENST00000569075 TTBK1Q5TCY1 1321 aaPredicted RBP9.2□□□□□ -0.94
TMEM87A-213ENST00000569075 PRIM1P49642 420 aaKnown RBP9.2□□□□□ -0.94
TMEM87A-213ENST00000569075 PLCB2Q00722 1185 aa9.2□□□□□ -0.94
TMEM87A-213ENST00000569075 ZBED2Q9BTP6 218 aa9.2□□□□□ -0.94
TMEM87A-213ENST00000569075 PTPREP23469 700 aa9.19□□□□□ -0.94
TMEM87A-213ENST00000569075 TYW1BQ6NUM6 668 aa9.19□□□□□ -0.94
TMEM87A-213ENST00000569075 SLC4A5Q9BY07 1137 aa9.19□□□□□ -0.94
TMEM87A-213ENST00000569075 BHMG1C9JSJ3 638 aaPredicted RBP9.18□□□□□ -0.94
TMEM87A-213ENST00000569075 SPDYE16A6NNV3 312 aaPredicted RBP9.17□□□□□ -0.94
TMEM87A-213ENST00000569075 C6orf132Q5T0Z8 1188 aa9.16□□□□□ -0.94
TMEM87A-213ENST00000569075 ERICH6Q7L0X2 663 aa9.16□□□□□ -0.94
TMEM87A-213ENST00000569075 FBXW7Q969H0 707 aa9.16□□□□□ -0.94
TMEM87A-213ENST00000569075 EPAS1Q99814 870 aa9.16□□□□□ -0.94
TMEM87A-213ENST00000569075 RANGAP1P46060 587 aaPredicted RBP9.14□□□□□ -0.95
TMEM87A-213ENST00000569075 RBM33Q96EV2 1170 aaKnown RBP9.14□□□□□ -0.95
TMEM87A-213ENST00000569075 PROX2Q3B8N5 592 aa9.13□□□□□ -0.95
TMEM87A-213ENST00000569075 KCNV2Q8TDN2 545 aa9.13□□□□□ -0.95
TMEM87A-213ENST00000569075 PPP1R3GB7ZBB8 358 aa9.12□□□□□ -0.95
TMEM87A-213ENST00000569075 OSBPP22059 807 aa9.12□□□□□ -0.95
TMEM87A-213ENST00000569075 TSR1Q2NL82 804 aaKnown RBP9.12□□□□□ -0.95
TMEM87A-213ENST00000569075 NBR1Q14596 966 aa9.11□□□□□ -0.95
TMEM87A-213ENST00000569075 HOMEZQ8IX15 550 aa9.11□□□□□ -0.95
TMEM87A-213ENST00000569075 KCNH8Q96L42 1107 aa9.11□□□□□ -0.95
TMEM87A-213ENST00000569075 GRXCR2A6NFK2 248 aa9.1□□□□□ -0.95
TMEM87A-213ENST00000569075 EN1Q05925 392 aaPredicted RBP9.1□□□□□ -0.95
TMEM87A-213ENST00000569075 MYT1Q01538 1121 aa9.09□□□□□ -0.95
TMEM87A-213ENST00000569075 ARHGEF1Q92888 912 aaKnown RBP9.09□□□□□ -0.95
TMEM87A-213ENST00000569075 KDM2AQ9Y2K7 1162 aa9.08□□□□□ -0.96
TMEM87A-213ENST00000569075 MLLT3P42568 568 aaPredicted RBP9.07□□□□□ -0.96
TMEM87A-213ENST00000569075 TIMELESSQ9UNS1 1208 aa9.07□□□□□ -0.96
TMEM87A-213ENST00000569075 KCTD12Q96CX2 325 aaKnown RBP9.06□□□□□ -0.96
TMEM87A-213ENST00000569075 KIAA1468Q9P260 1216 aa9.06□□□□□ -0.96
TMEM87A-213ENST00000569075 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
TMEM87A-213ENST00000569075 MAP3K7O43318 606 aa9.05□□□□□ -0.96
TMEM87A-213ENST00000569075 FAM198AQ9UFP1 575 aa9.05□□□□□ -0.96
TMEM87A-213ENST00000569075 C3orf80F5H4A9 247 aa9.04□□□□□ -0.96
TMEM87A-213ENST00000569075 TSKSQ9UJT2 592 aa9.04□□□□□ -0.96
TMEM87A-213ENST00000569075 MYO15BQ96JP2 1530 aa9.04□□□□□ -0.96
TMEM87A-213ENST00000569075 ONECUT3O60422 494 aaPredicted RBP9.03□□□□□ -0.96
TMEM87A-213ENST00000569075 CDHR5Q9HBB8 845 aa9.03□□□□□ -0.96
TMEM87A-213ENST00000569075 NPDC1Q9NQX5 325 aaPredicted RBP9.03□□□□□ -0.96
TMEM87A-213ENST00000569075 BICRAQ9NZM4 1560 aa9.03□□□□□ -0.96
TMEM87A-213ENST00000569075 UNC13AQ9UPW8 1703 aa9.03□□□□□ -0.96
TMEM87A-213ENST00000569075 TRIM6-TRIM34B2RNG4 842 aa9.02□□□□□ -0.97
TMEM87A-213ENST00000569075 MRPL50Q8N5N7 158 aaKnown RBP9.02□□□□□ -0.97
TMEM87A-213ENST00000569075 STAC3Q96MF2 364 aa9.02□□□□□ -0.97
TMEM87A-213ENST00000569075 HCSTQ9UBK5 93 aa9.02□□□□□ -0.97
TMEM87A-213ENST00000569075 TULP1O00294 542 aaPredicted RBP9.01□□□□□ -0.97
TMEM87A-213ENST00000569075 HAP1P54257 671 aaPredicted RBP9.01□□□□□ -0.97
TMEM87A-213ENST00000569075 TPRNQ4KMQ1 711 aa9□□□□□ -0.97
TMEM87A-213ENST00000569075 SEMA3EO15041 775 aa8.99□□□□□ -0.97
TMEM87A-213ENST00000569075 THSD4Q6ZMP0 1018 aa8.99□□□□□ -0.97
TMEM87A-213ENST00000569075 PRSS12P56730 875 aa8.99□□□□□ -0.97
TMEM87A-213ENST00000569075 ZCCHC6Q5VYS8 1495 aaKnown RBP8.99□□□□□ -0.97
TMEM87A-213ENST00000569075 WNT2BQ93097 391 aa8.99□□□□□ -0.97
TMEM87A-213ENST00000569075 CDCA7LQ96GN5 454 aa8.99□□□□□ -0.97
TMEM87A-213ENST00000569075 SEPT9Q9UHD8 586 aaPredicted RBP8.99□□□□□ -0.97
TMEM87A-213ENST00000569075 PTPN5P54829 565 aa8.98□□□□□ -0.97
TMEM87A-213ENST00000569075 NBPF3Q9H094 633 aa8.98□□□□□ -0.97
TMEM87A-213ENST00000569075 LAPTM4BQ86VI4 370 aa8.97□□□□□ -0.97
TMEM87A-213ENST00000569075 TTC13Q8NBP0 860 aa8.96□□□□□ -0.98
TMEM87A-213ENST00000569075 ZFRQ96KR1 1074 aaKnown RBP8.96□□□□□ -0.98
TMEM87A-213ENST00000569075 SMAPO00193 183 aa8.95□□□□□ -0.98
TMEM87A-213ENST00000569075 SCRIBQ14160 1630 aa8.94□□□□□ -0.98
TMEM87A-213ENST00000569075 GOLGA8CPA6NN73 597 aa8.94□□□□□ -0.98
TMEM87A-213ENST00000569075 P3H3Q8IVL6 736 aa8.94□□□□□ -0.98
TMEM87A-213ENST00000569075 BCAMP50895 628 aa8.93□□□□□ -0.98
TMEM87A-213ENST00000569075 PACS2Q86VP3 889 aa8.93□□□□□ -0.98
TMEM87A-213ENST00000569075 CERKQ8TCT0 537 aa8.93□□□□□ -0.98
TMEM87A-213ENST00000569075 FAM98CQ17RN3 349 aaKnown RBP8.92□□□□□ -0.98
TMEM87A-213ENST00000569075 DCAF1Q9Y4B6 1507 aa8.92□□□□□ -0.98
TMEM87A-213ENST00000569075 TESPA1A2RU30 521 aaPredicted RBP8.91□□□□□ -0.98
TMEM87A-213ENST00000569075 SOWAHBA6NEL2 793 aa8.91□□□□□ -0.98
TMEM87A-213ENST00000569075 TATDN2Q93075 761 aa8.91□□□□□ -0.98
TMEM87A-213ENST00000569075 PLA2G2EQ9NZK7 142 aa8.9□□□□□ -0.98
TMEM87A-213ENST00000569075 CECR2Q9BXF3 1484 aa8.9□□□□□ -0.99
TMEM87A-213ENST00000569075 PTGDRQ13258 359 aa8.89□□□□□ -0.99
TMEM87A-213ENST00000569075 PADI6Q6TGC4 694 aa8.89□□□□□ -0.99
TMEM87A-213ENST00000569075 VSIG10Q8N0Z9 540 aa8.89□□□□□ -0.99
TMEM87A-213ENST00000569075 ANKK1Q8NFD2 765 aa8.89□□□□□ -0.99
TMEM87A-213ENST00000569075 NUDT18Q6ZVK8 323 aa8.88□□□□□ -0.99
TMEM87A-213ENST00000569075 WBP1LQ9NX94 342 aa8.88□□□□□ -0.99
TMEM87A-213ENST00000569075 RBM27Q9P2N5 1060 aaKnown RBP8.88□□□□□ -0.99
TMEM87A-213ENST00000569075 GTF3C3Q9Y5Q9 886 aa8.88□□□□□ -0.99
TMEM87A-213ENST00000569075 PNMA3Q9UL41 463 aa8.87□□□□□ -0.99
TMEM87A-213ENST00000569075 CC2D2AQ9P2K1 1620 aa8.87□□□□□ -0.99
TMEM87A-213ENST00000569075 SHROOM4Q9ULL8 1493 aa8.87□□□□□ -0.99
TMEM87A-213ENST00000569075 RBM26Q5T8P6 1007 aaKnown RBP8.86□□□□□ -0.99
TMEM87A-213ENST00000569075 EYA1Q99502 592 aa8.86□□□□□ -0.99
TMEM87A-213ENST00000569075 SAMD7Q7Z3H4 446 aa8.85□□□□□ -0.99
TMEM87A-213ENST00000569075 NUTM2FA1L443 756 aa8.84□□□□□ -0.99
TMEM87A-213ENST00000569075 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.84□□□□□ -0.99
TMEM87A-213ENST00000569075 EIF4G1Q04637 1599 aaKnown RBP8.84□□□□□ -1
TMEM87A-213ENST00000569075 NBPF26B4DH59 902 aa8.82□□□□□ -1
TMEM87A-213ENST00000569075 FAM161AQ3B820 660 aa8.82□□□□□ -1
TMEM87A-213ENST00000569075 LRCH3Q96II8 777 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms