RNA–Protein interactions for RNA: ENST00000568682.5

KARS-210, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-210ENST00000568682 HIC1Q14526 733 aa12.05□□□□□ -0.48
KARS-210ENST00000568682 ZNF454Q8N9F8 522 aa12.05□□□□□ -0.48
KARS-210ENST00000568682 ZDHHC16Q969W1 377 aa12.05□□□□□ -0.48
KARS-210ENST00000568682 MAP3K7O43318 606 aa12.04□□□□□ -0.48
KARS-210ENST00000568682 PTGDRQ13258 359 aa12.04□□□□□ -0.48
KARS-210ENST00000568682 SLC24A3Q9HC58 644 aa12.04□□□□□ -0.48
KARS-210ENST00000568682 LHX6Q9UPM6 363 aa12.04□□□□□ -0.48
KARS-210ENST00000568682 GNPATO15228 680 aa12.03□□□□□ -0.48
KARS-210ENST00000568682 RBM33Q96EV2 1170 aaKnown RBP12.01□□□□□ -0.49
KARS-210ENST00000568682 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
KARS-210ENST00000568682 MAP2K5Q13163 448 aa11.99□□□□□ -0.49
KARS-210ENST00000568682 KRI1Q8N9T8 703 aaKnown RBP11.99□□□□□ -0.49
KARS-210ENST00000568682 CERKQ8TCT0 537 aa11.99□□□□□ -0.49
KARS-210ENST00000568682 AK7Q96M32 723 aa11.99□□□□□ -0.49
KARS-210ENST00000568682 CDHR5Q9HBB8 845 aa11.99□□□□□ -0.49
KARS-210ENST00000568682 NPDC1Q9NQX5 325 aaPredicted RBP11.99□□□□□ -0.49
KARS-210ENST00000568682 MINK1Q8N4C8 1332 aaPredicted RBP11.99□□□□□ -0.49
KARS-210ENST00000568682 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
KARS-210ENST00000568682 C6orf132Q5T0Z8 1188 aa11.98□□□□□ -0.49
KARS-210ENST00000568682 CECR2Q9BXF3 1484 aa11.97□□□□□ -0.49
KARS-210ENST00000568682 ADAM33Q9BZ11 813 aa11.97□□□□□ -0.49
KARS-210ENST00000568682 BCL2L12Q9HB09 334 aa11.95□□□□□ -0.5
KARS-210ENST00000568682 IRF6O14896 467 aa11.93□□□□□ -0.5
KARS-210ENST00000568682 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
KARS-210ENST00000568682 FECHP22830 423 aa11.92□□□□□ -0.5
KARS-210ENST00000568682 ST18O60284 1047 aa11.91□□□□□ -0.5
KARS-210ENST00000568682 TRIM66O15016 1216 aa11.9□□□□□ -0.5
KARS-210ENST00000568682 BRPF1P55201 1214 aaPredicted RBP11.9□□□□□ -0.5
KARS-210ENST00000568682 CCDC102AQ96A19 550 aa11.9□□□□□ -0.5
KARS-210ENST00000568682 PTPREP23469 700 aa11.89□□□□□ -0.51
KARS-210ENST00000568682 TTC13Q8NBP0 860 aa11.88□□□□□ -0.51
KARS-210ENST00000568682 PPP1R3GB7ZBB8 358 aa11.87□□□□□ -0.51
KARS-210ENST00000568682 ERBB3P21860 1342 aa11.86□□□□□ -0.51
KARS-210ENST00000568682 EMP3P54852 163 aa11.84□□□□□ -0.51
KARS-210ENST00000568682 PRSS12P56730 875 aa11.84□□□□□ -0.51
KARS-210ENST00000568682 PDE4DQ08499 809 aa11.84□□□□□ -0.51
KARS-210ENST00000568682 NEUROD2Q15784 382 aa11.84□□□□□ -0.51
KARS-210ENST00000568682 AMHR2Q16671 573 aa11.84□□□□□ -0.51
KARS-210ENST00000568682 COL9A1P20849 921 aa11.83□□□□□ -0.52
KARS-210ENST00000568682 PADI6Q6TGC4 694 aa11.83□□□□□ -0.52
KARS-210ENST00000568682 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
KARS-210ENST00000568682 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
KARS-210ENST00000568682 KCNH8Q96L42 1107 aa11.82□□□□□ -0.52
KARS-210ENST00000568682 SMARCA4P51532 1647 aa11.82□□□□□ -0.52
KARS-210ENST00000568682 OATP04181 439 aa11.8□□□□□ -0.52
KARS-210ENST00000568682 FAM163AQ96GL9 167 aaPredicted RBP11.8□□□□□ -0.52
KARS-210ENST00000568682 ONECUT3O60422 494 aaPredicted RBP11.79□□□□□ -0.52
KARS-210ENST00000568682 PBX2P40425 430 aa11.79□□□□□ -0.52
KARS-210ENST00000568682 MARVELD3Q96A59 401 aa11.79□□□□□ -0.52
KARS-210ENST00000568682 ADGRG1Q9Y653 693 aa11.79□□□□□ -0.52
KARS-210ENST00000568682 KCNK17Q96T54 332 aa11.78□□□□□ -0.52
KARS-210ENST00000568682 ARHGAP33O14559 1287 aa11.77□□□□□ -0.53
KARS-210ENST00000568682 TMEM132AQ24JP5 1023 aa11.77□□□□□ -0.53
KARS-210ENST00000568682 ZNF687Q8N1G0 1237 aa11.77□□□□□ -0.53
KARS-210ENST00000568682 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
KARS-210ENST00000568682 LCE2DQ5TA82 110 aaPredicted RBP11.76□□□□□ -0.53
KARS-210ENST00000568682 METTL3Q86U44 580 aaKnown RBP11.76□□□□□ -0.53
KARS-210ENST00000568682 FAM205CA6NFA0 338 aa11.75□□□□□ -0.53
KARS-210ENST00000568682 PXYLP1Q8TE99 480 aa11.75□□□□□ -0.53
KARS-210ENST00000568682 SLC4A5Q9BY07 1137 aa11.75□□□□□ -0.53
KARS-210ENST00000568682 KDM4CQ9H3R0 1056 aa11.75□□□□□ -0.53
KARS-210ENST00000568682 TSKSQ9UJT2 592 aa11.75□□□□□ -0.53
KARS-210ENST00000568682 MROH2BQ7Z745 1585 aa11.75□□□□□ -0.53
KARS-210ENST00000568682 POTEEQ6S8J3 1075 aa11.74□□□□□ -0.53
KARS-210ENST00000568682 PARP9Q8IXQ6 854 aa11.74□□□□□ -0.53
KARS-210ENST00000568682 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
KARS-210ENST00000568682 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
KARS-210ENST00000568682 GPBP1L1Q9HC44 474 aaPredicted RBP11.74□□□□□ -0.53
KARS-210ENST00000568682 DAXXQ9UER7 740 aaPredicted RBP11.74□□□□□ -0.53
KARS-210ENST00000568682 FAM198AQ9UFP1 575 aa11.74□□□□□ -0.53
KARS-210ENST00000568682 ATAD2BQ9ULI0 1458 aa11.73□□□□□ -0.53
KARS-210ENST00000568682 BAZ1AQ9NRL2 1556 aaPredicted RBP11.72□□□□□ -0.53
KARS-210ENST00000568682 PSEN2P49810 448 aa11.72□□□□□ -0.53
KARS-210ENST00000568682 PACS2Q86VP3 889 aa11.72□□□□□ -0.53
KARS-210ENST00000568682 HS3ST6Q96QI5 342 aa11.72□□□□□ -0.53
KARS-210ENST00000568682 PHOX2BQ99453 314 aa11.72□□□□□ -0.53
KARS-210ENST00000568682 NBPF26B4DH59 902 aa11.71□□□□□ -0.53
KARS-210ENST00000568682 CLCN1P35523 988 aa11.71□□□□□ -0.53
KARS-210ENST00000568682 FAM161AQ3B820 660 aa11.71□□□□□ -0.53
KARS-210ENST00000568682 TMUB1Q9BVT8 246 aa11.71□□□□□ -0.53
KARS-210ENST00000568682 TTLL12Q14166 644 aaPredicted RBP11.7□□□□□ -0.54
KARS-210ENST00000568682 EYA1Q99502 592 aa11.7□□□□□ -0.54
KARS-210ENST00000568682 PROX2Q3B8N5 592 aa11.69□□□□□ -0.54
KARS-210ENST00000568682 GPCPD1Q9NPB8 672 aa11.69□□□□□ -0.54
KARS-210ENST00000568682 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
KARS-210ENST00000568682 POTEB3A0JP26 581 aa11.68□□□□□ -0.54
KARS-210ENST00000568682 POTEBQ6S5H4 581 aa11.68□□□□□ -0.54
KARS-210ENST00000568682 DMRTA1Q5VZB9 504 aa11.67□□□□□ -0.54
KARS-210ENST00000568682 GIGYF2Q6Y7W6 1299 aaKnown RBP11.67□□□□□ -0.54
KARS-210ENST00000568682 NUDT18Q6ZVK8 323 aa11.67□□□□□ -0.54
KARS-210ENST00000568682 TATDN2Q93075 761 aa11.67□□□□□ -0.54
KARS-210ENST00000568682 NCAPD3P42695 1498 aa11.67□□□□□ -0.54
KARS-210ENST00000568682 SMARCA2P51531 1590 aa11.67□□□□□ -0.54
KARS-210ENST00000568682 WIZO95785 1651 aa11.66□□□□□ -0.54
KARS-210ENST00000568682 MDM2Q00987 491 aaPredicted RBP11.66□□□□□ -0.54
KARS-210ENST00000568682 RABGEF1Q9UJ41 708 aa11.66□□□□□ -0.54
KARS-210ENST00000568682 PNMA3Q9UL41 463 aa11.66□□□□□ -0.54
KARS-210ENST00000568682 AXIN2Q9Y2T1 843 aa11.66□□□□□ -0.54
KARS-210ENST00000568682 REPIN1Q9BWE0 567 aaKnown RBP11.65□□□□□ -0.54
KARS-210ENST00000568682 C3orf80F5H4A9 247 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms