RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 C6orf132Q5T0Z8 1188 aa10.98□□□□□ -0.65
SHCBP1-206ENST00000567698 GNPATO15228 680 aa10.97□□□□□ -0.65
SHCBP1-206ENST00000567698 BCL2L12Q9HB09 334 aa10.96□□□□□ -0.65
SHCBP1-206ENST00000567698 PSDA5PKW4 1024 aaPredicted RBP10.94□□□□□ -0.66
SHCBP1-206ENST00000567698 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
SHCBP1-206ENST00000567698 MAP2K5Q13163 448 aa10.93□□□□□ -0.66
SHCBP1-206ENST00000567698 POTEEQ6S8J3 1075 aa10.93□□□□□ -0.66
SHCBP1-206ENST00000567698 TTC13Q8NBP0 860 aa10.93□□□□□ -0.66
SHCBP1-206ENST00000567698 POTEB3A0JP26 581 aa10.92□□□□□ -0.66
SHCBP1-206ENST00000567698 COL9A1P20849 921 aa10.92□□□□□ -0.66
SHCBP1-206ENST00000567698 POTEBQ6S5H4 581 aa10.92□□□□□ -0.66
SHCBP1-206ENST00000567698 MINK1Q8N4C8 1332 aaPredicted RBP10.91□□□□□ -0.66
SHCBP1-206ENST00000567698 MARVELD3Q96A59 401 aa10.91□□□□□ -0.66
SHCBP1-206ENST00000567698 IRF6O14896 467 aa10.9□□□□□ -0.66
SHCBP1-206ENST00000567698 BRPF1P55201 1214 aaPredicted RBP10.9□□□□□ -0.66
SHCBP1-206ENST00000567698 CCDC102AQ96A19 550 aa10.9□□□□□ -0.66
SHCBP1-206ENST00000567698 AK7Q96M32 723 aa10.9□□□□□ -0.66
SHCBP1-206ENST00000567698 TRIM66O15016 1216 aa10.89□□□□□ -0.67
SHCBP1-206ENST00000567698 FAM163AQ96GL9 167 aaPredicted RBP10.88□□□□□ -0.67
SHCBP1-206ENST00000567698 FAM198AQ9UFP1 575 aa10.88□□□□□ -0.67
SHCBP1-206ENST00000567698 VARS2Q5ST30 1063 aaKnown RBP10.87□□□□□ -0.67
SHCBP1-206ENST00000567698 PADI6Q6TGC4 694 aa10.87□□□□□ -0.67
SHCBP1-206ENST00000567698 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
SHCBP1-206ENST00000567698 CERKQ8TCT0 537 aa10.87□□□□□ -0.67
SHCBP1-206ENST00000567698 EMP3P54852 163 aa10.86□□□□□ -0.67
SHCBP1-206ENST00000567698 RBM27Q9P2N5 1060 aaKnown RBP10.86□□□□□ -0.67
SHCBP1-206ENST00000567698 ERBB3P21860 1342 aa10.85□□□□□ -0.67
SHCBP1-206ENST00000567698 PPP1R3GB7ZBB8 358 aa10.85□□□□□ -0.67
SHCBP1-206ENST00000567698 PTPREP23469 700 aa10.84□□□□□ -0.67
SHCBP1-206ENST00000567698 PRSS12P56730 875 aa10.84□□□□□ -0.67
SHCBP1-206ENST00000567698 C3orf80F5H4A9 247 aa10.83□□□□□ -0.68
SHCBP1-206ENST00000567698 CDCA7LQ96GN5 454 aa10.83□□□□□ -0.68
SHCBP1-206ENST00000567698 PHOX2BQ99453 314 aa10.83□□□□□ -0.68
SHCBP1-206ENST00000567698 FAM205CA6NFA0 338 aa10.82□□□□□ -0.68
SHCBP1-206ENST00000567698 FAM161AQ3B820 660 aa10.82□□□□□ -0.68
SHCBP1-206ENST00000567698 KCNK17Q96T54 332 aa10.82□□□□□ -0.68
SHCBP1-206ENST00000567698 TSKSQ9UJT2 592 aa10.82□□□□□ -0.68
SHCBP1-206ENST00000567698 ADGRG1Q9Y653 693 aa10.82□□□□□ -0.68
SHCBP1-206ENST00000567698 PSEN2P49810 448 aa10.81□□□□□ -0.68
SHCBP1-206ENST00000567698 PDE4DQ08499 809 aa10.81□□□□□ -0.68
SHCBP1-206ENST00000567698 AMHR2Q16671 573 aa10.81□□□□□ -0.68
SHCBP1-206ENST00000567698 HS3ST6Q96QI5 342 aa10.81□□□□□ -0.68
SHCBP1-206ENST00000567698 ZNF687Q8N1G0 1237 aa10.8□□□□□ -0.68
SHCBP1-206ENST00000567698 DMRTA1Q5VZB9 504 aa10.79□□□□□ -0.68
SHCBP1-206ENST00000567698 ZBED2Q9BTP6 218 aa10.79□□□□□ -0.68
SHCBP1-206ENST00000567698 GPBP1L1Q9HC44 474 aaPredicted RBP10.79□□□□□ -0.68
SHCBP1-206ENST00000567698 PROX2Q3B8N5 592 aa10.78□□□□□ -0.68
SHCBP1-206ENST00000567698 TMUB1Q9BVT8 246 aa10.78□□□□□ -0.68
SHCBP1-206ENST00000567698 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
SHCBP1-206ENST00000567698 TRIM6-TRIM34B2RNG4 842 aa10.77□□□□□ -0.69
SHCBP1-206ENST00000567698 ARHGAP33O14559 1287 aa10.77□□□□□ -0.69
SHCBP1-206ENST00000567698 METTL3Q86U44 580 aaKnown RBP10.77□□□□□ -0.69
SHCBP1-206ENST00000567698 PXYLP1Q8TE99 480 aa10.77□□□□□ -0.69
SHCBP1-206ENST00000567698 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
SHCBP1-206ENST00000567698 NEUROD2Q15784 382 aa10.76□□□□□ -0.69
SHCBP1-206ENST00000567698 PARP9Q8IXQ6 854 aa10.76□□□□□ -0.69
SHCBP1-206ENST00000567698 EYA1Q99502 592 aa10.75□□□□□ -0.69
SHCBP1-206ENST00000567698 SLC4A5Q9BY07 1137 aa10.75□□□□□ -0.69
SHCBP1-206ENST00000567698 ONECUT3O60422 494 aaPredicted RBP10.74□□□□□ -0.69
SHCBP1-206ENST00000567698 PBX2P40425 430 aa10.74□□□□□ -0.69
SHCBP1-206ENST00000567698 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
SHCBP1-206ENST00000567698 NLRP7Q8WX94 980 aa10.72□□□□□ -0.69
SHCBP1-206ENST00000567698 OATP04181 439 aa10.71□□□□□ -0.69
SHCBP1-206ENST00000567698 TATDN2Q93075 761 aa10.7□□□□□ -0.7
SHCBP1-206ENST00000567698 VPS9D1Q9Y2B5 631 aa10.7□□□□□ -0.7
SHCBP1-206ENST00000567698 NUDT18Q6ZVK8 323 aa10.69□□□□□ -0.7
SHCBP1-206ENST00000567698 KIAA1468Q9P260 1216 aa10.68□□□□□ -0.7
SHCBP1-206ENST00000567698 SMAPO00193 183 aa10.67□□□□□ -0.7
SHCBP1-206ENST00000567698 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
SHCBP1-206ENST00000567698 GIGYF2Q6Y7W6 1299 aaKnown RBP10.67□□□□□ -0.7
SHCBP1-206ENST00000567698 RBM46Q8TBY0 533 aaKnown RBP10.67□□□□□ -0.7
SHCBP1-206ENST00000567698 RCCD1A6NED2 376 aa10.66□□□□□ -0.7
SHCBP1-206ENST00000567698 NBPF26B4DH59 902 aa10.66□□□□□ -0.7
SHCBP1-206ENST00000567698 BHMG1C9JSJ3 638 aaPredicted RBP10.66□□□□□ -0.7
SHCBP1-206ENST00000567698 MS4A1P11836 297 aa10.66□□□□□ -0.7
SHCBP1-206ENST00000567698 KCNH8Q96L42 1107 aa10.66□□□□□ -0.7
SHCBP1-206ENST00000567698 RABGEF1Q9UJ41 708 aa10.66□□□□□ -0.7
SHCBP1-206ENST00000567698 PNMA3Q9UL41 463 aa10.66□□□□□ -0.7
SHCBP1-206ENST00000567698 PACS2Q86VP3 889 aa10.65□□□□□ -0.7
SHCBP1-206ENST00000567698 FAM117AQ9C073 453 aa10.65□□□□□ -0.7
SHCBP1-206ENST00000567698 PLEKHG3A1L390 1219 aa10.64□□□□□ -0.71
SHCBP1-206ENST00000567698 TK2O00142 265 aa10.64□□□□□ -0.71
SHCBP1-206ENST00000567698 LSM11P83369 360 aaKnown RBP eCLIP10.64□□□□□ -0.71
SHCBP1-206ENST00000567698 TTLL12Q14166 644 aaPredicted RBP10.64□□□□□ -0.71
SHCBP1-206ENST00000567698 TMEM132AQ24JP5 1023 aa10.64□□□□□ -0.71
SHCBP1-206ENST00000567698 KRTAP3-3Q9BYR6 98 aa10.64□□□□□ -0.71
SHCBP1-206ENST00000567698 KRTAP3-2Q9BYR7 98 aa10.64□□□□□ -0.71
SHCBP1-206ENST00000567698 GPCPD1Q9NPB8 672 aa10.64□□□□□ -0.71
SHCBP1-206ENST00000567698 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.63□□□□□ -0.71
SHCBP1-206ENST00000567698 CLCN1P35523 988 aa10.63□□□□□ -0.71
SHCBP1-206ENST00000567698 HRO43593 1189 aa10.62□□□□□ -0.71
SHCBP1-206ENST00000567698 FAM217BQ9NTX9 383 aaPredicted RBP10.62□□□□□ -0.71
SHCBP1-206ENST00000567698 TMEM134Q9H6X4 195 aa10.61□□□□□ -0.71
SHCBP1-206ENST00000567698 SEPT9Q9UHD8 586 aaPredicted RBP10.61□□□□□ -0.71
SHCBP1-206ENST00000567698 DNAJB2P25686 324 aa10.6□□□□□ -0.71
SHCBP1-206ENST00000567698 ADGRD1Q6QNK2 874 aa10.6□□□□□ -0.71
SHCBP1-206ENST00000567698 SSTR3P32745 418 aaPredicted RBP10.58□□□□□ -0.72
SHCBP1-206ENST00000567698 IL27Q8NEV9 243 aa10.58□□□□□ -0.72
SHCBP1-206ENST00000567698 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
SHCBP1-206ENST00000567698 FAM98CQ17RN3 349 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms