RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 TAOK2Q9UL54 1235 aa14.84□□□□□ -0.03
SIN3A-208ENST00000567289 FOXD4L6Q3SYB3 417 aaPredicted RBP14.83□□□□□ -0.04
SIN3A-208ENST00000567289 FOXD4L3Q6VB84 417 aaPredicted RBP14.83□□□□□ -0.04
SIN3A-208ENST00000567289 SMC4Q9NTJ3 1288 aa14.83□□□□□ -0.04
SIN3A-208ENST00000567289 NOL8Q76FK4 1167 aaKnown RBP14.82□□□□□ -0.04
SIN3A-208ENST00000567289 GBP4Q96PP9 640 aa14.82□□□□□ -0.04
SIN3A-208ENST00000567289 SOX12O15370 315 aa14.81□□□□□ -0.04
SIN3A-208ENST00000567289 TIAM1Q13009 1591 aa14.8□□□□□ -0.04
SIN3A-208ENST00000567289 ELL2O00472 640 aaPredicted RBP14.8□□□□□ -0.04
SIN3A-208ENST00000567289 C20orf194Q5TEA3 1177 aa14.8□□□□□ -0.04
SIN3A-208ENST00000567289 PMFBP1Q8TBY8 1022 aa14.79□□□□□ -0.04
SIN3A-208ENST00000567289 POGKQ9P215 609 aa14.78□□□□□ -0.04
SIN3A-208ENST00000567289 STK26Q9P289 416 aa14.78□□□□□ -0.04
SIN3A-208ENST00000567289 BIVM-ERCC5R4GMW8 1640 aa14.78□□□□□ -0.04
SIN3A-208ENST00000567289 BCAR3O75815 825 aa14.77□□□□□ -0.04
SIN3A-208ENST00000567289 NUTM2DQ5VT03 806 aaPredicted RBP14.77□□□□□ -0.04
SIN3A-208ENST00000567289 DDX49Q9Y6V7 483 aaKnown RBP14.77□□□□□ -0.05
SIN3A-208ENST00000567289 FAM13BQ9NYF5 915 aa14.77□□□□□ -0.05
SIN3A-208ENST00000567289 CASC1Q6TDU7 716 aa14.76□□□□□ -0.05
SIN3A-208ENST00000567289 SRPK2P78362 688 aaKnown RBP14.76□□□□□ -0.05
SIN3A-208ENST00000567289 NBPF1Q3BBV0 1214 aa14.75□□□□□ -0.05
SIN3A-208ENST00000567289 ANKRD30AQ9BXX3 1397 aa14.75□□□□□ -0.05
SIN3A-208ENST00000567289 CALD1Q05682 793 aaKnown RBP14.75□□□□□ -0.05
SIN3A-208ENST00000567289 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
SIN3A-208ENST00000567289 CFTRP13569 1480 aa14.72□□□□□ -0.05
SIN3A-208ENST00000567289 SMG6Q86US8 1419 aaKnown RBP14.72□□□□□ -0.05
SIN3A-208ENST00000567289 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
SIN3A-208ENST00000567289 ANKRD45Q5TZF3 282 aa14.71□□□□□ -0.05
SIN3A-208ENST00000567289 TRAK1Q9UPV9 953 aa14.71□□□□□ -0.05
SIN3A-208ENST00000567289 LNPKQ9C0E8 428 aa14.7□□□□□ -0.06
SIN3A-208ENST00000567289 CGNL1Q0VF96 1302 aa14.7□□□□□ -0.06
SIN3A-208ENST00000567289 CADPSQ9ULU8 1353 aa14.7□□□□□ -0.06
SIN3A-208ENST00000567289 MYOM3Q5VTT5 1437 aa14.7□□□□□ -0.06
SIN3A-208ENST00000567289 E9PSI1 815 aa14.7□□□□□ -0.06
SIN3A-208ENST00000567289 TRAK2O60296 914 aa14.69□□□□□ -0.06
SIN3A-208ENST00000567289 C14orf37Q86TY3 774 aa14.68□□□□□ -0.06
SIN3A-208ENST00000567289 CHMP5Q9NZZ3 219 aa14.68□□□□□ -0.06
SIN3A-208ENST00000567289 PKNOX2Q96KN3 472 aa14.68□□□□□ -0.06
SIN3A-208ENST00000567289 FAM43AQ8N2R8 423 aa14.68□□□□□ -0.06
SIN3A-208ENST00000567289 C22orf23Q9BZE7 217 aa14.68□□□□□ -0.06
SIN3A-208ENST00000567289 IPO8O15397 1037 aaKnown RBP14.67□□□□□ -0.06
SIN3A-208ENST00000567289 RBM10P98175 930 aaKnown RBP14.67□□□□□ -0.06
SIN3A-208ENST00000567289 GGT6Q6P531 493 aa14.67□□□□□ -0.06
SIN3A-208ENST00000567289 DDX11L8A8MPP1 907 aa14.67□□□□□ -0.06
SIN3A-208ENST00000567289 RAD54L2Q9Y4B4 1467 aa14.66□□□□□ -0.06
SIN3A-208ENST00000567289 MPNDQ8N594 471 aa14.66□□□□□ -0.06
SIN3A-208ENST00000567289 BRD4O60885 1362 aaPredicted RBP14.66□□□□□ -0.06
SIN3A-208ENST00000567289 DRC7Q8IY82 874 aa14.66□□□□□ -0.06
SIN3A-208ENST00000567289 NCOA2Q15596 1464 aa14.65□□□□□ -0.06
SIN3A-208ENST00000567289 PCF11O94913 1555 aaKnown RBP14.65□□□□□ -0.06
SIN3A-208ENST00000567289 BCL11BQ9C0K0 894 aaPredicted RBP14.65□□□□□ -0.06
SIN3A-208ENST00000567289 ESF1Q9H501 851 aaKnown RBP14.65□□□□□ -0.06
SIN3A-208ENST00000567289 KCNJ4P48050 445 aa14.64□□□□□ -0.07
SIN3A-208ENST00000567289 KIAA2012Q0VF49 1180 aa14.64□□□□□ -0.07
SIN3A-208ENST00000567289 ZKSCAN2Q63HK3 967 aa14.64□□□□□ -0.07
SIN3A-208ENST00000567289 CCDC144AA2RUR9 1427 aa14.64□□□□□ -0.07
SIN3A-208ENST00000567289 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
SIN3A-208ENST00000567289 PDZRN3Q9UPQ7 1066 aa14.63□□□□□ -0.07
SIN3A-208ENST00000567289 CDK11BP21127 795 aaKnown RBP14.62□□□□□ -0.07
SIN3A-208ENST00000567289 CHAF1AQ13111 956 aaPredicted RBP14.62□□□□□ -0.07
SIN3A-208ENST00000567289 R3HCC1Q9Y3T6 440 aaKnown RBP14.62□□□□□ -0.07
SIN3A-208ENST00000567289 RNF214Q8ND24 703 aa14.62□□□□□ -0.07
SIN3A-208ENST00000567289 NAP1L2Q9ULW6 460 aaPredicted RBP14.62□□□□□ -0.07
SIN3A-208ENST00000567289 SLC4A10Q6U841 1118 aa14.62□□□□□ -0.07
SIN3A-208ENST00000567289 MAP3K1Q13233 1512 aa14.62□□□□□ -0.07
SIN3A-208ENST00000567289 NAIPQ13075 1403 aa14.62□□□□□ -0.07
SIN3A-208ENST00000567289 GOLGA6L4A6NEF3 574 aa14.61□□□□□ -0.07
SIN3A-208ENST00000567289 CASKIN1Q8WXD9 1431 aa14.61□□□□□ -0.07
SIN3A-208ENST00000567289 HFM1A2PYH4 1435 aa14.61□□□□□ -0.07
SIN3A-208ENST00000567289 KIF3BO15066 747 aa14.61□□□□□ -0.07
SIN3A-208ENST00000567289 OS9Q13438 667 aaPredicted RBP14.61□□□□□ -0.07
SIN3A-208ENST00000567289 DZIP1LQ8IYY4 767 aaKnown RBP14.61□□□□□ -0.07
SIN3A-208ENST00000567289 PPP2R1AP30153 589 aa14.6□□□□□ -0.07
SIN3A-208ENST00000567289 TRIM6-TRIM34B2RNG4 842 aa14.6□□□□□ -0.07
SIN3A-208ENST00000567289 MCTP1Q6DN14 999 aa14.6□□□□□ -0.07
SIN3A-208ENST00000567289 MRE11P49959 708 aa14.59□□□□□ -0.07
SIN3A-208ENST00000567289 PTPRKQ15262 1439 aa14.59□□□□□ -0.07
SIN3A-208ENST00000567289 HMGXB3Q12766 1538 aa14.58□□□□□ -0.07
SIN3A-208ENST00000567289 A0A0U1RQG5 324 aaPredicted RBP14.58□□□□□ -0.07
SIN3A-208ENST00000567289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.58□□□□□ -0.08
SIN3A-208ENST00000567289 CHMP4BQ9H444 224 aaKnown RBP14.58□□□□□ -0.08
SIN3A-208ENST00000567289 FYCO1Q9BQS8 1478 aa14.58□□□□□ -0.08
SIN3A-208ENST00000567289 ZRSR1Q15695 479 aaKnown RBP14.58□□□□□ -0.08
SIN3A-208ENST00000567289 FGD1P98174 961 aa14.57□□□□□ -0.08
SIN3A-208ENST00000567289 NASPP49321 788 aaPredicted RBP14.56□□□□□ -0.08
SIN3A-208ENST00000567289 TCP11L2Q8N4U5 519 aa14.56□□□□□ -0.08
SIN3A-208ENST00000567289 FANCD2Q9BXW9 1451 aa14.56□□□□□ -0.08
SIN3A-208ENST00000567289 MCM4P33991 863 aa14.56□□□□□ -0.08
SIN3A-208ENST00000567289 TSR2Q969E8 191 aaKnown RBP14.56□□□□□ -0.08
SIN3A-208ENST00000567289 CHMP3Q9Y3E7 222 aa14.56□□□□□ -0.08
SIN3A-208ENST00000567289 CAVIN1Q6NZI2 390 aaKnown RBP14.55□□□□□ -0.08
SIN3A-208ENST00000567289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.55□□□□□ -0.08
SIN3A-208ENST00000567289 C1orf115Q9H7X2 142 aa14.55□□□□□ -0.08
SIN3A-208ENST00000567289 MCCP23508 829 aa14.54□□□□□ -0.08
SIN3A-208ENST00000567289 AQRO60306 1485 aaKnown RBP eCLIP14.54□□□□□ -0.08
SIN3A-208ENST00000567289 ESPNB1AK53 854 aa14.54□□□□□ -0.08
SIN3A-208ENST00000567289 PANK2Q9BZ23 570 aa14.54□□□□□ -0.08
SIN3A-208ENST00000567289 GRPEL1Q9HAV7 217 aa14.53□□□□□ -0.08
SIN3A-208ENST00000567289 NUTM2FA1L443 756 aa14.52□□□□□ -0.08
SIN3A-208ENST00000567289 ST18O60284 1047 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms