RNA–Protein interactions for RNA: ENST00000567006.1

ACSM3-210, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 2

Gene ACSM3, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-210ENST00000567006 MRPL50Q8N5N7 158 aaKnown RBP12.41□□□□□ -0.42
ACSM3-210ENST00000567006 NBPF3Q9H094 633 aa12.41□□□□□ -0.42
ACSM3-210ENST00000567006 WDR70Q9NW82 654 aa12.4□□□□□ -0.42
ACSM3-210ENST00000567006 PLA2G2EQ9NZK7 142 aa12.4□□□□□ -0.42
ACSM3-210ENST00000567006 E2F4Q16254 413 aa12.37□□□□□ -0.43
ACSM3-210ENST00000567006 SPDYE16A6NNV3 312 aaPredicted RBP12.36□□□□□ -0.43
ACSM3-210ENST00000567006 COL9A1P20849 921 aa12.36□□□□□ -0.43
ACSM3-210ENST00000567006 RABGEF1Q9UJ41 708 aa12.36□□□□□ -0.43
ACSM3-210ENST00000567006 PTPN5P54829 565 aa12.35□□□□□ -0.43
ACSM3-210ENST00000567006 PDIA6Q15084 440 aa12.35□□□□□ -0.43
ACSM3-210ENST00000567006 C6orf132Q5T0Z8 1188 aa12.35□□□□□ -0.43
ACSM3-210ENST00000567006 DDX12PQ92771 950 aa12.35□□□□□ -0.43
ACSM3-210ENST00000567006 WNT2BQ93097 391 aa12.35□□□□□ -0.43
ACSM3-210ENST00000567006 PROX2Q3B8N5 592 aa12.33□□□□□ -0.44
ACSM3-210ENST00000567006 THSD4Q6ZMP0 1018 aa12.33□□□□□ -0.44
ACSM3-210ENST00000567006 RBM33Q96EV2 1170 aaKnown RBP12.32□□□□□ -0.44
ACSM3-210ENST00000567006 ONECUT3O60422 494 aaPredicted RBP12.31□□□□□ -0.44
ACSM3-210ENST00000567006 ARIH1Q9Y4X5 557 aaPredicted RBP12.3□□□□□ -0.44
ACSM3-210ENST00000567006 NBR1Q14596 966 aa12.29□□□□□ -0.44
ACSM3-210ENST00000567006 LAPTM4BQ86VI4 370 aa12.29□□□□□ -0.44
ACSM3-210ENST00000567006 KIAA1468Q9P260 1216 aa12.28□□□□□ -0.44
ACSM3-210ENST00000567006 MAP3K7O43318 606 aa12.26□□□□□ -0.45
ACSM3-210ENST00000567006 EN1Q05925 392 aaPredicted RBP12.26□□□□□ -0.45
ACSM3-210ENST00000567006 ANKK1Q8NFD2 765 aa12.26□□□□□ -0.45
ACSM3-210ENST00000567006 TRIM6-TRIM34B2RNG4 842 aa12.24□□□□□ -0.45
ACSM3-210ENST00000567006 GRXCR2A6NFK2 248 aa12.2□□□□□ -0.46
ACSM3-210ENST00000567006 TSR1Q2NL82 804 aaKnown RBP12.2□□□□□ -0.46
ACSM3-210ENST00000567006 ZFRQ96KR1 1074 aaKnown RBP12.2□□□□□ -0.46
ACSM3-210ENST00000567006 PACS2Q86VP3 889 aa12.19□□□□□ -0.46
ACSM3-210ENST00000567006 SOWAHBA6NEL2 793 aa12.18□□□□□ -0.46
ACSM3-210ENST00000567006 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
ACSM3-210ENST00000567006 CERKQ8TCT0 537 aa12.18□□□□□ -0.46
ACSM3-210ENST00000567006 SEPT9Q9UHD8 586 aaPredicted RBP12.18□□□□□ -0.46
ACSM3-210ENST00000567006 FAM98CQ17RN3 349 aaKnown RBP12.17□□□□□ -0.46
ACSM3-210ENST00000567006 BCAMP50895 628 aa12.15□□□□□ -0.46
ACSM3-210ENST00000567006 NYAP1Q6ZVC0 841 aa12.14□□□□□ -0.47
ACSM3-210ENST00000567006 TSHZ2Q9NRE2 1034 aa12.14□□□□□ -0.47
ACSM3-210ENST00000567006 TSKSQ9UJT2 592 aa12.14□□□□□ -0.47
ACSM3-210ENST00000567006 PRSS12P56730 875 aa12.13□□□□□ -0.47
ACSM3-210ENST00000567006 CDCA7LQ96GN5 454 aa12.13□□□□□ -0.47
ACSM3-210ENST00000567006 OSBPP22059 807 aa12.12□□□□□ -0.47
ACSM3-210ENST00000567006 LRCH3Q96II8 777 aa12.11□□□□□ -0.47
ACSM3-210ENST00000567006 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
ACSM3-210ENST00000567006 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
ACSM3-210ENST00000567006 ARHGEF1Q92888 912 aaKnown RBP12.09□□□□□ -0.47
ACSM3-210ENST00000567006 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
ACSM3-210ENST00000567006 TSR3Q9UJK0 312 aaKnown RBP12.08□□□□□ -0.48
ACSM3-210ENST00000567006 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
ACSM3-210ENST00000567006 RGS20O76081 388 aa12.06□□□□□ -0.48
ACSM3-210ENST00000567006 ITGBL1O95965 494 aaPredicted RBP12.05□□□□□ -0.48
ACSM3-210ENST00000567006 RBM27Q9P2N5 1060 aaKnown RBP12.05□□□□□ -0.48
ACSM3-210ENST00000567006 HPS5Q9UPZ3 1129 aa12.05□□□□□ -0.48
ACSM3-210ENST00000567006 A0A0G2JS52 829 aa12.04□□□□□ -0.48
ACSM3-210ENST00000567006 TATDN2Q93075 761 aa12.04□□□□□ -0.48
ACSM3-210ENST00000567006 CDHR5Q9HBB8 845 aa12.04□□□□□ -0.48
ACSM3-210ENST00000567006 SMAPO00193 183 aa12.03□□□□□ -0.48
ACSM3-210ENST00000567006 FAM198AQ9UFP1 575 aa12.03□□□□□ -0.48
ACSM3-210ENST00000567006 PNMA3Q9UL41 463 aa12.03□□□□□ -0.48
ACSM3-210ENST00000567006 KCNV2Q8TDN2 545 aa12.02□□□□□ -0.49
ACSM3-210ENST00000567006 PPP4CP60510 307 aa12.01□□□□□ -0.49
ACSM3-210ENST00000567006 HDGFP51858 240 aaKnown RBP12□□□□□ -0.49
ACSM3-210ENST00000567006 KCNC4Q03721 635 aa11.99□□□□□ -0.49
ACSM3-210ENST00000567006 NUDT18Q6ZVK8 323 aa11.99□□□□□ -0.49
ACSM3-210ENST00000567006 SAMD7Q7Z3H4 446 aa11.99□□□□□ -0.49
ACSM3-210ENST00000567006 P3H3Q8IVL6 736 aa11.98□□□□□ -0.49
ACSM3-210ENST00000567006 NPDC1Q9NQX5 325 aaPredicted RBP11.97□□□□□ -0.49
ACSM3-210ENST00000567006 C3orf80F5H4A9 247 aa11.96□□□□□ -0.49
ACSM3-210ENST00000567006 MLLT3P42568 568 aaPredicted RBP11.95□□□□□ -0.5
ACSM3-210ENST00000567006 PADI6Q6TGC4 694 aa11.95□□□□□ -0.5
ACSM3-210ENST00000567006 TTC13Q8NBP0 860 aa11.95□□□□□ -0.5
ACSM3-210ENST00000567006 NECTIN2Q92692 538 aa11.91□□□□□ -0.5
ACSM3-210ENST00000567006 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
ACSM3-210ENST00000567006 RNF40O75150 1001 aa11.89□□□□□ -0.51
ACSM3-210ENST00000567006 SLC4A3P48751 1232 aa11.88□□□□□ -0.51
ACSM3-210ENST00000567006 PTGDRQ13258 359 aa11.87□□□□□ -0.51
ACSM3-210ENST00000567006 SLF2Q8IX21 1173 aa11.86□□□□□ -0.51
ACSM3-210ENST00000567006 SWT1Q5T5J6 900 aaKnown RBP11.85□□□□□ -0.51
ACSM3-210ENST00000567006 EYA1Q99502 592 aa11.85□□□□□ -0.51
ACSM3-210ENST00000567006 IRX2Q9BZI1 471 aaPredicted RBP11.85□□□□□ -0.51
ACSM3-210ENST00000567006 NUTM2FA1L443 756 aa11.84□□□□□ -0.51
ACSM3-210ENST00000567006 TJAP1Q5JTD0 557 aa11.84□□□□□ -0.51
ACSM3-210ENST00000567006 IL21Q9HBE4 155 aa11.83□□□□□ -0.52
ACSM3-210ENST00000567006 SEMA3EO15041 775 aa11.82□□□□□ -0.52
ACSM3-210ENST00000567006 MTRQ99707 1265 aa11.82□□□□□ -0.52
ACSM3-210ENST00000567006 RBM46Q8TBY0 533 aaKnown RBP11.81□□□□□ -0.52
ACSM3-210ENST00000567006 FCHSD2O94868 740 aa11.8□□□□□ -0.52
ACSM3-210ENST00000567006 APLP1P51693 650 aa11.8□□□□□ -0.52
ACSM3-210ENST00000567006 DNAJB2P25686 324 aa11.78□□□□□ -0.52
ACSM3-210ENST00000567006 PRR14Q9BWN1 585 aa11.78□□□□□ -0.52
ACSM3-210ENST00000567006 SMYD5Q6GMV2 418 aa11.77□□□□□ -0.53
ACSM3-210ENST00000567006 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
ACSM3-210ENST00000567006 TESPA1A2RU30 521 aaPredicted RBP11.73□□□□□ -0.53
ACSM3-210ENST00000567006 ZNF516Q92618 1163 aa11.73□□□□□ -0.53
ACSM3-210ENST00000567006 TMEM134Q9H6X4 195 aa11.73□□□□□ -0.53
ACSM3-210ENST00000567006 HAP1P54257 671 aaPredicted RBP11.72□□□□□ -0.53
ACSM3-210ENST00000567006 RCCD1A6NED2 376 aa11.71□□□□□ -0.53
ACSM3-210ENST00000567006 OATP04181 439 aa11.7□□□□□ -0.54
ACSM3-210ENST00000567006 COPS2P61201 443 aa11.7□□□□□ -0.54
ACSM3-210ENST00000567006 HIC1Q14526 733 aa11.7□□□□□ -0.54
ACSM3-210ENST00000567006 PPP1R18Q6NYC8 613 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms