RNA–Protein interactions for RNA: ENST00000563639.2

AC027458.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC027458.1, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027458.1-201ENST00000563639 NBR1Q14596 966 aa15.43■□□□□ 0.06
AC027458.1-201ENST00000563639 GRXCR2A6NFK2 248 aa15.42■□□□□ 0.06
AC027458.1-201ENST00000563639 ADGRD1Q6QNK2 874 aa15.42■□□□□ 0.06
AC027458.1-201ENST00000563639 TK2O00142 265 aa15.4■□□□□ 0.06
AC027458.1-201ENST00000563639 RBM33Q96EV2 1170 aaKnown RBP15.4■□□□□ 0.06
AC027458.1-201ENST00000563639 PRIM1P49642 420 aaKnown RBP15.39■□□□□ 0.05
AC027458.1-201ENST00000563639 EN1Q05925 392 aaPredicted RBP15.38■□□□□ 0.05
AC027458.1-201ENST00000563639 C6orf132Q5T0Z8 1188 aa15.38■□□□□ 0.05
AC027458.1-201ENST00000563639 COL9A1P20849 921 aa15.37■□□□□ 0.05
AC027458.1-201ENST00000563639 ZBED2Q9BTP6 218 aa15.37■□□□□ 0.05
AC027458.1-201ENST00000563639 PPP1R3GB7ZBB8 358 aa15.36■□□□□ 0.05
AC027458.1-201ENST00000563639 OSBPP22059 807 aa15.36■□□□□ 0.05
AC027458.1-201ENST00000563639 VPS9D1Q9Y2B5 631 aa15.36■□□□□ 0.05
AC027458.1-201ENST00000563639 MLLT3P42568 568 aaPredicted RBP15.35■□□□□ 0.05
AC027458.1-201ENST00000563639 SLC4A5Q9BY07 1137 aa15.35■□□□□ 0.05
AC027458.1-201ENST00000563639 HRO43593 1189 aa15.34■□□□□ 0.05
AC027458.1-201ENST00000563639 MAP3K7O43318 606 aa15.33■□□□□ 0.04
AC027458.1-201ENST00000563639 TSR1Q2NL82 804 aaKnown RBP15.33■□□□□ 0.04
AC027458.1-201ENST00000563639 MYT1LQ9UL68 1186 aa15.33■□□□□ 0.04
AC027458.1-201ENST00000563639 SEMA3EO15041 775 aa15.31■□□□□ 0.04
AC027458.1-201ENST00000563639 PROX2Q3B8N5 592 aa15.27■□□□□ 0.04
AC027458.1-201ENST00000563639 RNF166Q96A37 237 aaPredicted RBP15.27■□□□□ 0.04
AC027458.1-201ENST00000563639 BHMG1C9JSJ3 638 aaPredicted RBP15.24■□□□□ 0.03
AC027458.1-201ENST00000563639 CDHR5Q9HBB8 845 aa15.24■□□□□ 0.03
AC027458.1-201ENST00000563639 TESPA1A2RU30 521 aaPredicted RBP15.2■□□□□ 0.02
AC027458.1-201ENST00000563639 RABGEF1Q9UJ41 708 aa15.19■□□□□ 0.02
AC027458.1-201ENST00000563639 TRIM6-TRIM34B2RNG4 842 aa15.17■□□□□ 0.02
AC027458.1-201ENST00000563639 ONECUT3O60422 494 aaPredicted RBP15.16■□□□□ 0.02
AC027458.1-201ENST00000563639 STAC3Q96MF2 364 aa15.16■□□□□ 0.02
AC027458.1-201ENST00000563639 NPDC1Q9NQX5 325 aaPredicted RBP15.16■□□□□ 0.02
AC027458.1-201ENST00000563639 KIAA1468Q9P260 1216 aa15.16■□□□□ 0.02
AC027458.1-201ENST00000563639 CERKQ8TCT0 537 aa15.15■□□□□ 0.02
AC027458.1-201ENST00000563639 CDCA7LQ96GN5 454 aa15.14■□□□□ 0.01
AC027458.1-201ENST00000563639 NBPF3Q9H094 633 aa15.14■□□□□ 0.01
AC027458.1-201ENST00000563639 TSKSQ9UJT2 592 aa15.14■□□□□ 0.01
AC027458.1-201ENST00000563639 PRSS12P56730 875 aa15.13■□□□□ 0.01
AC027458.1-201ENST00000563639 MRPL50Q8N5N7 158 aaKnown RBP15.13■□□□□ 0.01
AC027458.1-201ENST00000563639 FAM198AQ9UFP1 575 aa15.12■□□□□ 0.01
AC027458.1-201ENST00000563639 KCTD12Q96CX2 325 aaKnown RBP15.08■□□□□ 0
AC027458.1-201ENST00000563639 RBM26Q5T8P6 1007 aaKnown RBP15.07■□□□□ 0
AC027458.1-201ENST00000563639 SEPT9Q9UHD8 586 aaPredicted RBP15.07■□□□□ 0
AC027458.1-201ENST00000563639 PTGDRQ13258 359 aa15.06■□□□□ 0
AC027458.1-201ENST00000563639 SMYD5Q6GMV2 418 aa15.06■□□□□ 0
AC027458.1-201ENST00000563639 RBM27Q9P2N5 1060 aaKnown RBP15.06■□□□□ 0
AC027458.1-201ENST00000563639 NUTM2FA1L443 756 aa15.05■□□□□ -0
AC027458.1-201ENST00000563639 C3orf80F5H4A9 247 aa15.05■□□□□ -0
AC027458.1-201ENST00000563639 LAPTM4BQ86VI4 370 aa15.05■□□□□ -0
AC027458.1-201ENST00000563639 PACS2Q86VP3 889 aa15.05■□□□□ -0
AC027458.1-201ENST00000563639 TTC13Q8NBP0 860 aa15.05■□□□□ -0
AC027458.1-201ENST00000563639 GOLGA8CPA6NN73 597 aa15.03■□□□□ -0
AC027458.1-201ENST00000563639 PADI6Q6TGC4 694 aa15.03■□□□□ -0
AC027458.1-201ENST00000563639 WNT2BQ93097 391 aa15.01□□□□□ -0.01
AC027458.1-201ENST00000563639 SMAPO00193 183 aa15□□□□□ -0.01
AC027458.1-201ENST00000563639 FAM98CQ17RN3 349 aaKnown RBP14.99□□□□□ -0.01
AC027458.1-201ENST00000563639 THSD4Q6ZMP0 1018 aa14.99□□□□□ -0.01
AC027458.1-201ENST00000563639 ZFRQ96KR1 1074 aaKnown RBP14.99□□□□□ -0.01
AC027458.1-201ENST00000563639 TATDN2Q93075 761 aa14.98□□□□□ -0.01
AC027458.1-201ENST00000563639 FCHSD2O94868 740 aa14.97□□□□□ -0.01
AC027458.1-201ENST00000563639 HCSTQ9UBK5 93 aa14.97□□□□□ -0.01
AC027458.1-201ENST00000563639 PNMA3Q9UL41 463 aa14.97□□□□□ -0.01
AC027458.1-201ENST00000563639 NBPF26B4DH59 902 aa14.96□□□□□ -0.01
AC027458.1-201ENST00000563639 NUDT18Q6ZVK8 323 aa14.95□□□□□ -0.02
AC027458.1-201ENST00000563639 ANKK1Q8NFD2 765 aa14.95□□□□□ -0.02
AC027458.1-201ENST00000563639 GPR37O15354 613 aa14.94□□□□□ -0.02
AC027458.1-201ENST00000563639 PTPN5P54829 565 aa14.93□□□□□ -0.02
AC027458.1-201ENST00000563639 BCAMP50895 628 aa14.91□□□□□ -0.02
AC027458.1-201ENST00000563639 SOWAHBA6NEL2 793 aa14.9□□□□□ -0.02
AC027458.1-201ENST00000563639 HIC1Q14526 733 aa14.89□□□□□ -0.03
AC027458.1-201ENST00000563639 SLC24A1O60721 1099 aa14.88□□□□□ -0.03
AC027458.1-201ENST00000563639 EYA1Q99502 592 aa14.88□□□□□ -0.03
AC027458.1-201ENST00000563639 GPIHBP1Q8IV16 184 aa14.87□□□□□ -0.03
AC027458.1-201ENST00000563639 ADGRG1Q9Y653 693 aa14.87□□□□□ -0.03
AC027458.1-201ENST00000563639 TULP1O00294 542 aaPredicted RBP14.86□□□□□ -0.03
AC027458.1-201ENST00000563639 FECHP22830 423 aa14.85□□□□□ -0.03
AC027458.1-201ENST00000563639 FAM161AQ3B820 660 aa14.85□□□□□ -0.03
AC027458.1-201ENST00000563639 SAMD7Q7Z3H4 446 aa14.85□□□□□ -0.03
AC027458.1-201ENST00000563639 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.85□□□□□ -0.03
AC027458.1-201ENST00000563639 GNPATO15228 680 aa14.84□□□□□ -0.03
AC027458.1-201ENST00000563639 LRCH3Q96II8 777 aa14.84□□□□□ -0.03
AC027458.1-201ENST00000563639 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.83□□□□□ -0.04
AC027458.1-201ENST00000563639 WBP1LQ9NX94 342 aa14.8□□□□□ -0.04
AC027458.1-201ENST00000563639 RBM46Q8TBY0 533 aaKnown RBP14.79□□□□□ -0.04
AC027458.1-201ENST00000563639 HPS5Q9UPZ3 1129 aa14.79□□□□□ -0.04
AC027458.1-201ENST00000563639 SWT1Q5T5J6 900 aaKnown RBP14.77□□□□□ -0.05
AC027458.1-201ENST00000563639 TSR3Q9UJK0 312 aaKnown RBP14.77□□□□□ -0.05
AC027458.1-201ENST00000563639 LMOD2Q6P5Q4 547 aa14.75□□□□□ -0.05
AC027458.1-201ENST00000563639 PXYLP1Q8TE99 480 aa14.74□□□□□ -0.05
AC027458.1-201ENST00000563639 RCCD1A6NED2 376 aa14.73□□□□□ -0.05
AC027458.1-201ENST00000563639 OATP04181 439 aa14.73□□□□□ -0.05
AC027458.1-201ENST00000563639 DNAJB2P25686 324 aa14.73□□□□□ -0.05
AC027458.1-201ENST00000563639 HDGFP51858 240 aaKnown RBP14.73□□□□□ -0.05
AC027458.1-201ENST00000563639 METTL3Q86U44 580 aaKnown RBP14.72□□□□□ -0.05
AC027458.1-201ENST00000563639 PPP4CP60510 307 aa14.71□□□□□ -0.05
AC027458.1-201ENST00000563639 NYAP1Q6ZVC0 841 aa14.71□□□□□ -0.05
AC027458.1-201ENST00000563639 TMEM134Q9H6X4 195 aa14.71□□□□□ -0.05
AC027458.1-201ENST00000563639 PLA2G2EQ9NZK7 142 aa14.71□□□□□ -0.05
AC027458.1-201ENST00000563639 RNF40O75150 1001 aa14.69□□□□□ -0.06
AC027458.1-201ENST00000563639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.67□□□□□ -0.06
AC027458.1-201ENST00000563639 SLF2Q8IX21 1173 aa14.67□□□□□ -0.06
AC027458.1-201ENST00000563639 MAP2K5Q13163 448 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms