RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 TSR1Q2NL82 804 aaKnown RBP11.74□□□□□ -0.53
CHD9-205ENST00000562785 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
CHD9-205ENST00000562785 ZNF454Q8N9F8 522 aa11.73□□□□□ -0.53
CHD9-205ENST00000562785 ZDHHC16Q969W1 377 aa11.73□□□□□ -0.53
CHD9-205ENST00000562785 GPBP1L1Q9HC44 474 aaPredicted RBP11.72□□□□□ -0.53
CHD9-205ENST00000562785 SNPHO15079 494 aa11.71□□□□□ -0.53
CHD9-205ENST00000562785 AMHR2Q16671 573 aa11.71□□□□□ -0.53
CHD9-205ENST00000562785 KDM4CQ9H3R0 1056 aa11.69□□□□□ -0.54
CHD9-205ENST00000562785 C6orf132Q5T0Z8 1188 aa11.68□□□□□ -0.54
CHD9-205ENST00000562785 CERKQ8TCT0 537 aa11.68□□□□□ -0.54
CHD9-205ENST00000562785 ADAM33Q9BZ11 813 aa11.68□□□□□ -0.54
CHD9-205ENST00000562785 LHX6Q9UPM6 363 aa11.68□□□□□ -0.54
CHD9-205ENST00000562785 OTUD5Q96G74 571 aa11.67□□□□□ -0.54
CHD9-205ENST00000562785 PSDA5PKW4 1024 aaPredicted RBP11.66□□□□□ -0.54
CHD9-205ENST00000562785 HOXB1P14653 301 aaPredicted RBP11.66□□□□□ -0.54
CHD9-205ENST00000562785 GTF3C3Q9Y5Q9 886 aa11.65□□□□□ -0.54
CHD9-205ENST00000562785 PARP9Q8IXQ6 854 aa11.64□□□□□ -0.55
CHD9-205ENST00000562785 RBM27Q9P2N5 1060 aaKnown RBP11.64□□□□□ -0.55
CHD9-205ENST00000562785 DAXXQ9UER7 740 aaPredicted RBP11.64□□□□□ -0.55
CHD9-205ENST00000562785 PPP4R3BQ5MIZ7 849 aa11.63□□□□□ -0.55
CHD9-205ENST00000562785 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
CHD9-205ENST00000562785 PADI6Q6TGC4 694 aa11.6□□□□□ -0.55
CHD9-205ENST00000562785 TTC13Q8NBP0 860 aa11.6□□□□□ -0.55
CHD9-205ENST00000562785 TTLL12Q14166 644 aaPredicted RBP11.58□□□□□ -0.56
CHD9-205ENST00000562785 LHX8Q68G74 356 aa11.58□□□□□ -0.56
CHD9-205ENST00000562785 PRSS12P56730 875 aa11.56□□□□□ -0.56
CHD9-205ENST00000562785 IL27Q8NEV9 243 aa11.56□□□□□ -0.56
CHD9-205ENST00000562785 ADGRG1Q9Y653 693 aa11.56□□□□□ -0.56
CHD9-205ENST00000562785 PPP1R3GB7ZBB8 358 aa11.55□□□□□ -0.56
CHD9-205ENST00000562785 OATP04181 439 aa11.55□□□□□ -0.56
CHD9-205ENST00000562785 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
CHD9-205ENST00000562785 METTL3Q86U44 580 aaKnown RBP11.55□□□□□ -0.56
CHD9-205ENST00000562785 CDCA7LQ96GN5 454 aa11.55□□□□□ -0.56
CHD9-205ENST00000562785 PHOX2BQ99453 314 aa11.55□□□□□ -0.56
CHD9-205ENST00000562785 TMUB1Q9BVT8 246 aa11.55□□□□□ -0.56
CHD9-205ENST00000562785 FAM117AQ9C073 453 aa11.55□□□□□ -0.56
CHD9-205ENST00000562785 COL9A1P20849 921 aa11.54□□□□□ -0.56
CHD9-205ENST00000562785 PTPREP23469 700 aa11.54□□□□□ -0.56
CHD9-205ENST00000562785 DDRGK1Q96HY6 314 aa11.54□□□□□ -0.56
CHD9-205ENST00000562785 CLCN1P35523 988 aa11.53□□□□□ -0.56
CHD9-205ENST00000562785 FAM161AQ3B820 660 aa11.53□□□□□ -0.56
CHD9-205ENST00000562785 PXYLP1Q8TE99 480 aa11.53□□□□□ -0.56
CHD9-205ENST00000562785 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
CHD9-205ENST00000562785 PLEKHG3A1L390 1219 aa11.51□□□□□ -0.57
CHD9-205ENST00000562785 GPCPD1Q9NPB8 672 aa11.51□□□□□ -0.57
CHD9-205ENST00000562785 MDM2Q00987 491 aaPredicted RBP11.5□□□□□ -0.57
CHD9-205ENST00000562785 FAM198AQ9UFP1 575 aa11.5□□□□□ -0.57
CHD9-205ENST00000562785 MS4A1P11836 297 aa11.49□□□□□ -0.57
CHD9-205ENST00000562785 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
CHD9-205ENST00000562785 TSKSQ9UJT2 592 aa11.48□□□□□ -0.57
CHD9-205ENST00000562785 TIMELESSQ9UNS1 1208 aa11.46□□□□□ -0.57
CHD9-205ENST00000562785 TRIM6-TRIM34B2RNG4 842 aa11.45□□□□□ -0.58
CHD9-205ENST00000562785 ERICH6Q7L0X2 663 aa11.45□□□□□ -0.58
CHD9-205ENST00000562785 NLRP7Q8WX94 980 aa11.45□□□□□ -0.58
CHD9-205ENST00000562785 KCNK17Q96T54 332 aa11.45□□□□□ -0.58
CHD9-205ENST00000562785 EYA1Q99502 592 aa11.44□□□□□ -0.58
CHD9-205ENST00000562785 FAM217BQ9NTX9 383 aaPredicted RBP11.44□□□□□ -0.58
CHD9-205ENST00000562785 ERBB3P21860 1342 aa11.43□□□□□ -0.58
CHD9-205ENST00000562785 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
CHD9-205ENST00000562785 NBPF26B4DH59 902 aa11.43□□□□□ -0.58
CHD9-205ENST00000562785 ST18O60284 1047 aa11.43□□□□□ -0.58
CHD9-205ENST00000562785 ONECUT3O60422 494 aaPredicted RBP11.43□□□□□ -0.58
CHD9-205ENST00000562785 KCNH8Q96L42 1107 aa11.43□□□□□ -0.58
CHD9-205ENST00000562785 SSTR3P32745 418 aaPredicted RBP11.42□□□□□ -0.58
CHD9-205ENST00000562785 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
CHD9-205ENST00000562785 PROX2Q3B8N5 592 aa11.41□□□□□ -0.58
CHD9-205ENST00000562785 VARS2Q5ST30 1063 aaKnown RBP11.41□□□□□ -0.58
CHD9-205ENST00000562785 C3orf80F5H4A9 247 aa11.4□□□□□ -0.58
CHD9-205ENST00000562785 NUDT18Q6ZVK8 323 aa11.4□□□□□ -0.58
CHD9-205ENST00000562785 PACS2Q86VP3 889 aa11.4□□□□□ -0.58
CHD9-205ENST00000562785 ZBED2Q9BTP6 218 aa11.4□□□□□ -0.58
CHD9-205ENST00000562785 RCCD1A6NED2 376 aa11.39□□□□□ -0.59
CHD9-205ENST00000562785 EMP3P54852 163 aa11.39□□□□□ -0.59
CHD9-205ENST00000562785 TATDN2Q93075 761 aa11.39□□□□□ -0.59
CHD9-205ENST00000562785 PSEN2P49810 448 aa11.38□□□□□ -0.59
CHD9-205ENST00000562785 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
CHD9-205ENST00000562785 ARHGAP33O14559 1287 aa11.37□□□□□ -0.59
CHD9-205ENST00000562785 DNAJB2P25686 324 aa11.37□□□□□ -0.59
CHD9-205ENST00000562785 POTEEQ6S8J3 1075 aa11.37□□□□□ -0.59
CHD9-205ENST00000562785 PBX2P40425 430 aa11.36□□□□□ -0.59
CHD9-205ENST00000562785 BEGAINQ9BUH8 593 aa11.36□□□□□ -0.59
CHD9-205ENST00000562785 SLC4A5Q9BY07 1137 aa11.36□□□□□ -0.59
CHD9-205ENST00000562785 SH3D19Q5HYK7 790 aa11.35□□□□□ -0.59
CHD9-205ENST00000562785 MARVELD3Q96A59 401 aa11.35□□□□□ -0.59
CHD9-205ENST00000562785 TMEM134Q9H6X4 195 aa11.35□□□□□ -0.59
CHD9-205ENST00000562785 C14orf37Q86TY3 774 aa11.33□□□□□ -0.6
CHD9-205ENST00000562785 ZNF687Q8N1G0 1237 aa11.33□□□□□ -0.6
CHD9-205ENST00000562785 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
CHD9-205ENST00000562785 NISCHQ9Y2I1 1504 aa11.33□□□□□ -0.6
CHD9-205ENST00000562785 SMAPO00193 183 aa11.32□□□□□ -0.6
CHD9-205ENST00000562785 DMRTA1Q5VZB9 504 aa11.32□□□□□ -0.6
CHD9-205ENST00000562785 RSPH6AQ9H0K4 717 aa11.32□□□□□ -0.6
CHD9-205ENST00000562785 FAM205CA6NFA0 338 aa11.31□□□□□ -0.6
CHD9-205ENST00000562785 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
CHD9-205ENST00000562785 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
CHD9-205ENST00000562785 AXIN2Q9Y2T1 843 aa11.31□□□□□ -0.6
CHD9-205ENST00000562785 CD46P15529 392 aa11.3□□□□□ -0.6
CHD9-205ENST00000562785 PCMTD1Q96MG8 357 aaPredicted RBP11.3□□□□□ -0.6
CHD9-205ENST00000562785 SKIV2LQ15477 1246 aaKnown RBP11.29□□□□□ -0.6
CHD9-205ENST00000562785 FAM163AQ96GL9 167 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms