RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 NEUROD2Q15784 382 aa9.76□□□□□ -0.85
CNOT1-203ENST00000562046 ZNF454Q8N9F8 522 aa9.76□□□□□ -0.85
CNOT1-203ENST00000562046 ZDHHC16Q969W1 377 aa9.76□□□□□ -0.85
CNOT1-203ENST00000562046 CCDC102AQ96A19 550 aa9.76□□□□□ -0.85
CNOT1-203ENST00000562046 LHX6Q9UPM6 363 aa9.76□□□□□ -0.85
CNOT1-203ENST00000562046 HOXB1P14653 301 aaPredicted RBP9.75□□□□□ -0.85
CNOT1-203ENST00000562046 TMEM132AQ24JP5 1023 aa9.75□□□□□ -0.85
CNOT1-203ENST00000562046 LHX8Q68G74 356 aa9.75□□□□□ -0.85
CNOT1-203ENST00000562046 C6orf132Q5T0Z8 1188 aa9.74□□□□□ -0.85
CNOT1-203ENST00000562046 ADAM33Q9BZ11 813 aa9.74□□□□□ -0.85
CNOT1-203ENST00000562046 PDE4DQ08499 809 aa9.73□□□□□ -0.85
CNOT1-203ENST00000562046 GPBP1L1Q9HC44 474 aaPredicted RBP9.71□□□□□ -0.86
CNOT1-203ENST00000562046 AMHR2Q16671 573 aa9.7□□□□□ -0.86
CNOT1-203ENST00000562046 PSDA5PKW4 1024 aaPredicted RBP9.69□□□□□ -0.86
CNOT1-203ENST00000562046 CERKQ8TCT0 537 aa9.69□□□□□ -0.86
CNOT1-203ENST00000562046 TTC13Q8NBP0 860 aa9.68□□□□□ -0.86
CNOT1-203ENST00000562046 BCL2L12Q9HB09 334 aa9.68□□□□□ -0.86
CNOT1-203ENST00000562046 PPP4R3BQ5MIZ7 849 aa9.67□□□□□ -0.86
CNOT1-203ENST00000562046 KDM4CQ9H3R0 1056 aa9.67□□□□□ -0.86
CNOT1-203ENST00000562046 RBM27Q9P2N5 1060 aaKnown RBP9.66□□□□□ -0.86
CNOT1-203ENST00000562046 PADI6Q6TGC4 694 aa9.65□□□□□ -0.86
CNOT1-203ENST00000562046 PARP9Q8IXQ6 854 aa9.65□□□□□ -0.86
CNOT1-203ENST00000562046 COL9A1P20849 921 aa9.64□□□□□ -0.87
CNOT1-203ENST00000562046 PHOX2BQ99453 314 aa9.64□□□□□ -0.87
CNOT1-203ENST00000562046 PRSS12P56730 875 aa9.63□□□□□ -0.87
CNOT1-203ENST00000562046 TMUB1Q9BVT8 246 aa9.62□□□□□ -0.87
CNOT1-203ENST00000562046 FAM198AQ9UFP1 575 aa9.62□□□□□ -0.87
CNOT1-203ENST00000562046 ADGRG1Q9Y653 693 aa9.62□□□□□ -0.87
CNOT1-203ENST00000562046 FAM161AQ3B820 660 aa9.61□□□□□ -0.87
CNOT1-203ENST00000562046 CDCA7LQ96GN5 454 aa9.61□□□□□ -0.87
CNOT1-203ENST00000562046 REPIN1Q9BWE0 567 aaKnown RBP9.61□□□□□ -0.87
CNOT1-203ENST00000562046 PPP1R3GB7ZBB8 358 aa9.6□□□□□ -0.87
CNOT1-203ENST00000562046 ST18O60284 1047 aa9.6□□□□□ -0.87
CNOT1-203ENST00000562046 PTPREP23469 700 aa9.6□□□□□ -0.87
CNOT1-203ENST00000562046 METTL3Q86U44 580 aaKnown RBP9.6□□□□□ -0.87
CNOT1-203ENST00000562046 PXYLP1Q8TE99 480 aa9.59□□□□□ -0.87
CNOT1-203ENST00000562046 OATP04181 439 aa9.58□□□□□ -0.88
CNOT1-203ENST00000562046 FAM117AQ9C073 453 aa9.58□□□□□ -0.88
CNOT1-203ENST00000562046 IL27Q8NEV9 243 aa9.57□□□□□ -0.88
CNOT1-203ENST00000562046 TSKSQ9UJT2 592 aa9.57□□□□□ -0.88
CNOT1-203ENST00000562046 GTF3C3Q9Y5Q9 886 aa9.57□□□□□ -0.88
CNOT1-203ENST00000562046 TTLL12Q14166 644 aaPredicted RBP9.56□□□□□ -0.88
CNOT1-203ENST00000562046 POTEEQ6S8J3 1075 aa9.56□□□□□ -0.88
CNOT1-203ENST00000562046 GIGYF2Q6Y7W6 1299 aaKnown RBP9.56□□□□□ -0.88
CNOT1-203ENST00000562046 PLEKHG3A1L390 1219 aa9.55□□□□□ -0.88
CNOT1-203ENST00000562046 C3orf80F5H4A9 247 aa9.55□□□□□ -0.88
CNOT1-203ENST00000562046 MS4A1P11836 297 aa9.54□□□□□ -0.88
CNOT1-203ENST00000562046 CLCN1P35523 988 aa9.54□□□□□ -0.88
CNOT1-203ENST00000562046 MDM2Q00987 491 aaPredicted RBP9.54□□□□□ -0.88
CNOT1-203ENST00000562046 KCNK17Q96T54 332 aa9.54□□□□□ -0.88
CNOT1-203ENST00000562046 EYA1Q99502 592 aa9.54□□□□□ -0.88
CNOT1-203ENST00000562046 DAXXQ9UER7 740 aaPredicted RBP9.54□□□□□ -0.88
CNOT1-203ENST00000562046 ERBB3P21860 1342 aa9.54□□□□□ -0.88
CNOT1-203ENST00000562046 TRIM6-TRIM34B2RNG4 842 aa9.53□□□□□ -0.88
CNOT1-203ENST00000562046 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
CNOT1-203ENST00000562046 NLRP7Q8WX94 980 aa9.53□□□□□ -0.88
CNOT1-203ENST00000562046 GPCPD1Q9NPB8 672 aa9.53□□□□□ -0.88
CNOT1-203ENST00000562046 ONECUT3O60422 494 aaPredicted RBP9.52□□□□□ -0.89
CNOT1-203ENST00000562046 PROX2Q3B8N5 592 aa9.52□□□□□ -0.89
CNOT1-203ENST00000562046 RBM46Q8TBY0 533 aaKnown RBP9.52□□□□□ -0.89
CNOT1-203ENST00000562046 MARVELD3Q96A59 401 aa9.52□□□□□ -0.89
CNOT1-203ENST00000562046 DDRGK1Q96HY6 314 aa9.52□□□□□ -0.89
CNOT1-203ENST00000562046 PSEN2P49810 448 aa9.51□□□□□ -0.89
CNOT1-203ENST00000562046 LCE2DQ5TA82 110 aaPredicted RBP9.51□□□□□ -0.89
CNOT1-203ENST00000562046 ZBED2Q9BTP6 218 aa9.51□□□□□ -0.89
CNOT1-203ENST00000562046 EMP3P54852 163 aa9.5□□□□□ -0.89
CNOT1-203ENST00000562046 FAM217BQ9NTX9 383 aaPredicted RBP9.5□□□□□ -0.89
CNOT1-203ENST00000562046 POTEB3A0JP26 581 aa9.49□□□□□ -0.89
CNOT1-203ENST00000562046 ARHGAP33O14559 1287 aa9.49□□□□□ -0.89
CNOT1-203ENST00000562046 SSTR3P32745 418 aaPredicted RBP9.49□□□□□ -0.89
CNOT1-203ENST00000562046 POTEBQ6S5H4 581 aa9.49□□□□□ -0.89
CNOT1-203ENST00000562046 NUDT18Q6ZVK8 323 aa9.49□□□□□ -0.89
CNOT1-203ENST00000562046 TATDN2Q93075 761 aa9.49□□□□□ -0.89
CNOT1-203ENST00000562046 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.48□□□□□ -0.89
CNOT1-203ENST00000562046 RCCD1A6NED2 376 aa9.48□□□□□ -0.89
CNOT1-203ENST00000562046 DMRTA1Q5VZB9 504 aa9.48□□□□□ -0.89
CNOT1-203ENST00000562046 PACS2Q86VP3 889 aa9.48□□□□□ -0.89
CNOT1-203ENST00000562046 ZNF687Q8N1G0 1237 aa9.48□□□□□ -0.89
CNOT1-203ENST00000562046 FAM163AQ96GL9 167 aaPredicted RBP9.48□□□□□ -0.89
CNOT1-203ENST00000562046 SLC4A5Q9BY07 1137 aa9.48□□□□□ -0.89
CNOT1-203ENST00000562046 FAM205CA6NFA0 338 aa9.47□□□□□ -0.89
CNOT1-203ENST00000562046 NBPF26B4DH59 902 aa9.47□□□□□ -0.89
CNOT1-203ENST00000562046 KCNH8Q96L42 1107 aa9.47□□□□□ -0.89
CNOT1-203ENST00000562046 PBX2P40425 430 aa9.46□□□□□ -0.9
CNOT1-203ENST00000562046 PNMA3Q9UL41 463 aa9.46□□□□□ -0.9
CNOT1-203ENST00000562046 AXIN2Q9Y2T1 843 aa9.46□□□□□ -0.9
CNOT1-203ENST00000562046 KIAA1468Q9P260 1216 aa9.45□□□□□ -0.9
CNOT1-203ENST00000562046 SMAPO00193 183 aa9.44□□□□□ -0.9
CNOT1-203ENST00000562046 HS3ST6Q96QI5 342 aa9.44□□□□□ -0.9
CNOT1-203ENST00000562046 GOPCQ9HD26 462 aa9.44□□□□□ -0.9
CNOT1-203ENST00000562046 DNAJB2P25686 324 aa9.43□□□□□ -0.9
CNOT1-203ENST00000562046 TMEM134Q9H6X4 195 aa9.43□□□□□ -0.9
CNOT1-203ENST00000562046 RABGEF1Q9UJ41 708 aa9.43□□□□□ -0.9
CNOT1-203ENST00000562046 BEGAINQ9BUH8 593 aa9.42□□□□□ -0.9
CNOT1-203ENST00000562046 VPS9D1Q9Y2B5 631 aa9.42□□□□□ -0.9
CNOT1-203ENST00000562046 TIMELESSQ9UNS1 1208 aa9.41□□□□□ -0.9
CNOT1-203ENST00000562046 CD46P15529 392 aa9.39□□□□□ -0.91
CNOT1-203ENST00000562046 SH3D19Q5HYK7 790 aa9.39□□□□□ -0.91
CNOT1-203ENST00000562046 BHMG1C9JSJ3 638 aaPredicted RBP9.38□□□□□ -0.91
CNOT1-203ENST00000562046 TK2O00142 265 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms