RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 TNRQ92752 1358 aa16.52■□□□□ 0.24
AC010542.3-202ENST00000561728 KIDINS220Q9ULH0 1771 aa16.52■□□□□ 0.24
AC010542.3-202ENST00000561728 LRP6O75581 1613 aa16.52■□□□□ 0.23
AC010542.3-202ENST00000561728 SPATA31A6Q5VVP1 1343 aa16.51■□□□□ 0.23
AC010542.3-202ENST00000561728 ADRA2BP18089 450 aa16.51■□□□□ 0.23
AC010542.3-202ENST00000561728 GGT6Q6P531 493 aa16.51■□□□□ 0.23
AC010542.3-202ENST00000561728 FAM135AQ9P2D6 1515 aa16.5■□□□□ 0.23
AC010542.3-202ENST00000561728 PHLPP1O60346 1717 aa16.49■□□□□ 0.23
AC010542.3-202ENST00000561728 RGS12O14924 1447 aa16.48■□□□□ 0.23
AC010542.3-202ENST00000561728 ATAD2Q6PL18 1390 aa16.48■□□□□ 0.23
AC010542.3-202ENST00000561728 LRRC9Q6ZRR7 1453 aa16.47■□□□□ 0.23
AC010542.3-202ENST00000561728 XIRP1Q702N8 1843 aaKnown RBP16.47■□□□□ 0.23
AC010542.3-202ENST00000561728 KDM5DQ9BY66 1539 aa16.46■□□□□ 0.23
AC010542.3-202ENST00000561728 UGGT1Q9NYU2 1555 aa16.46■□□□□ 0.23
AC010542.3-202ENST00000561728 YY1P25490 414 aa16.45■□□□□ 0.22
AC010542.3-202ENST00000561728 LRP5O75197 1615 aa16.44■□□□□ 0.22
AC010542.3-202ENST00000561728 FBXO31Q5XUX0 539 aaPredicted RBP16.42■□□□□ 0.22
AC010542.3-202ENST00000561728 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
AC010542.3-202ENST00000561728 KIF14Q15058 1648 aa16.41■□□□□ 0.22
AC010542.3-202ENST00000561728 RBM6P78332 1123 aaKnown RBP16.41■□□□□ 0.22
AC010542.3-202ENST00000561728 FGD6Q6ZV73 1430 aa16.41■□□□□ 0.22
AC010542.3-202ENST00000561728 NLRP1Q9C000 1473 aa16.4■□□□□ 0.22
AC010542.3-202ENST00000561728 AFF2P51816 1311 aa16.4■□□□□ 0.22
AC010542.3-202ENST00000561728 RANGAP1P46060 587 aaPredicted RBP16.39■□□□□ 0.21
AC010542.3-202ENST00000561728 TMEM94Q12767 1356 aa16.38■□□□□ 0.21
AC010542.3-202ENST00000561728 CDK11AQ9UQ88 783 aaPredicted RBP16.38■□□□□ 0.21
AC010542.3-202ENST00000561728 ATP7AQ04656 1500 aa16.37■□□□□ 0.21
AC010542.3-202ENST00000561728 PLXNC1O60486 1568 aa16.37■□□□□ 0.21
AC010542.3-202ENST00000561728 SPAG9O60271 1321 aaKnown RBP16.37■□□□□ 0.21
AC010542.3-202ENST00000561728 COL16A1Q07092 1604 aaPredicted RBP16.37■□□□□ 0.21
AC010542.3-202ENST00000561728 ZC3H13Q5T200 1668 aaKnown RBP16.37■□□□□ 0.21
AC010542.3-202ENST00000561728 A2MP01023 1474 aa16.36■□□□□ 0.21
AC010542.3-202ENST00000561728 SAMD9LQ8IVG5 1584 aa16.35■□□□□ 0.21
AC010542.3-202ENST00000561728 QTRT2Q9H974 415 aaKnown RBP16.35■□□□□ 0.21
AC010542.3-202ENST00000561728 CDC42BPBQ9Y5S2 1711 aa16.34■□□□□ 0.21
AC010542.3-202ENST00000561728 CCDC125Q86Z20 511 aa16.34■□□□□ 0.21
AC010542.3-202ENST00000561728 MIA2Q96PC5 1412 aa16.34■□□□□ 0.21
AC010542.3-202ENST00000561728 PZPP20742 1482 aa16.34■□□□□ 0.21
AC010542.3-202ENST00000561728 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.2
AC010542.3-202ENST00000561728 NGLY1Q96IV0 654 aa16.33■□□□□ 0.2
AC010542.3-202ENST00000561728 CLIP1P30622 1438 aa16.32■□□□□ 0.2
AC010542.3-202ENST00000561728 SLAIN2Q9P270 581 aa16.32■□□□□ 0.2
AC010542.3-202ENST00000561728 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
AC010542.3-202ENST00000561728 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
AC010542.3-202ENST00000561728 EP400Q96L91 3159 aa16.3■□□□□ 0.2
AC010542.3-202ENST00000561728 MSH6P52701 1360 aa16.29■□□□□ 0.2
AC010542.3-202ENST00000561728 MAP3K1Q13233 1512 aa16.29■□□□□ 0.2
AC010542.3-202ENST00000561728 SCAF11Q99590 1463 aaKnown RBP16.29■□□□□ 0.2
AC010542.3-202ENST00000561728 TROQ12816 1431 aaPredicted RBP16.28■□□□□ 0.2
AC010542.3-202ENST00000561728 PREX2Q70Z35 1606 aa16.28■□□□□ 0.2
AC010542.3-202ENST00000561728 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
AC010542.3-202ENST00000561728 NWD1Q149M9 1564 aa16.25■□□□□ 0.19
AC010542.3-202ENST00000561728 C8orf37Q96NL8 207 aa16.24■□□□□ 0.19
AC010542.3-202ENST00000561728 NHSL1Q5SYE7 1610 aa16.23■□□□□ 0.19
AC010542.3-202ENST00000561728 TXNDC2Q86VQ3 553 aa16.22■□□□□ 0.19
AC010542.3-202ENST00000561728 ZNF777Q9ULD5 760 aaPredicted RBP16.22■□□□□ 0.19
AC010542.3-202ENST00000561728 TIAM1Q13009 1591 aa16.21■□□□□ 0.19
AC010542.3-202ENST00000561728 SYCP2Q9BX26 1530 aa16.21■□□□□ 0.19
AC010542.3-202ENST00000561728 KCNA6P17658 529 aa16.21■□□□□ 0.19
AC010542.3-202ENST00000561728 WASHC2CQ9Y4E1 1318 aa16.2■□□□□ 0.18
AC010542.3-202ENST00000561728 INO80Q9ULG1 1556 aaPredicted RBP16.2■□□□□ 0.18
AC010542.3-202ENST00000561728 PRDM15P57071 1507 aaPredicted RBP16.19■□□□□ 0.18
AC010542.3-202ENST00000561728 LTKP29376 864 aa16.19■□□□□ 0.18
AC010542.3-202ENST00000561728 ADGBQ8N7X0 1667 aa16.18■□□□□ 0.18
AC010542.3-202ENST00000561728 HRCP23327 699 aa16.18■□□□□ 0.18
AC010542.3-202ENST00000561728 HNRNPMP52272 730 aaKnown RBP eCLIP16.18■□□□□ 0.18
AC010542.3-202ENST00000561728 EID1Q9Y6B2 187 aa16.18■□□□□ 0.18
AC010542.3-202ENST00000561728 AHDC1Q5TGY3 1603 aaPredicted RBP16.18■□□□□ 0.18
AC010542.3-202ENST00000561728 ABCC3O15438 1527 aa16.18■□□□□ 0.18
AC010542.3-202ENST00000561728 PSDA5PKW4 1024 aaPredicted RBP16.16■□□□□ 0.18
AC010542.3-202ENST00000561728 DEFB132Q7Z7B7 95 aa16.14■□□□□ 0.17
AC010542.3-202ENST00000561728 NKTRP30414 1462 aaKnown RBP16.14■□□□□ 0.17
AC010542.3-202ENST00000561728 BLMP54132 1417 aaPredicted RBP16.13■□□□□ 0.17
AC010542.3-202ENST00000561728 KIF3BO15066 747 aa16.13■□□□□ 0.17
AC010542.3-202ENST00000561728 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
AC010542.3-202ENST00000561728 NCOA2Q15596 1464 aa16.12■□□□□ 0.17
AC010542.3-202ENST00000561728 UBR1Q8IWV7 1749 aa16.11■□□□□ 0.17
AC010542.3-202ENST00000561728 ARHGAP23Q9P227 1491 aa16.11■□□□□ 0.17
AC010542.3-202ENST00000561728 SLIT1O75093 1534 aa16.11■□□□□ 0.17
AC010542.3-202ENST00000561728 TRPC5Q9UL62 973 aaPredicted RBP16.11■□□□□ 0.17
AC010542.3-202ENST00000561728 DIP2AQ14689 1571 aa16.11■□□□□ 0.17
AC010542.3-202ENST00000561728 DCAF8L1A6NGE4 600 aa16.1■□□□□ 0.17
AC010542.3-202ENST00000561728 KDM5AP29375 1690 aaKnown RBP16.1■□□□□ 0.17
AC010542.3-202ENST00000561728 CDC42BPAQ5VT25 1732 aa16.09■□□□□ 0.17
AC010542.3-202ENST00000561728 PIAS4Q8N2W9 510 aaPredicted RBP16.09■□□□□ 0.17
AC010542.3-202ENST00000561728 DHX29Q7Z478 1369 aaKnown RBP16.08■□□□□ 0.16
AC010542.3-202ENST00000561728 C1QTNF8P60827 252 aa16.07■□□□□ 0.16
AC010542.3-202ENST00000561728 USP21Q9UK80 565 aa16.07■□□□□ 0.16
AC010542.3-202ENST00000561728 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
AC010542.3-202ENST00000561728 KIAA1107Q9UPP5 1409 aa16.07■□□□□ 0.16
AC010542.3-202ENST00000561728 BCL9LQ86UU0 1499 aa16.06■□□□□ 0.16
AC010542.3-202ENST00000561728 PLEKHH2Q8IVE3 1493 aa16.06■□□□□ 0.16
AC010542.3-202ENST00000561728 C14orf37Q86TY3 774 aa16.06■□□□□ 0.16
AC010542.3-202ENST00000561728 SLC26A8Q96RN1 970 aa16.06■□□□□ 0.16
AC010542.3-202ENST00000561728 ERVK-7P63135 1459 aa16.04■□□□□ 0.16
AC010542.3-202ENST00000561728 ADAMTS2O95450 1211 aa16.04■□□□□ 0.16
AC010542.3-202ENST00000561728 CADPS2Q86UW7 1296 aa16.03■□□□□ 0.16
AC010542.3-202ENST00000561728 EHMT2Q96KQ7 1210 aa16.03■□□□□ 0.16
AC010542.3-202ENST00000561728 SETD5Q9C0A6 1442 aa16.02■□□□□ 0.16
AC010542.3-202ENST00000561728 ZNF784Q8NCA9 323 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms