RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 ADAM33Q9BZ11 813 aa7.36□□□□□ -1.23
CTDSPL2-211ENST00000561189 TK2O00142 265 aa7.35□□□□□ -1.23
CTDSPL2-211ENST00000561189 SEMA3EO15041 775 aa7.35□□□□□ -1.23
CTDSPL2-211ENST00000561189 PTPREP23469 700 aa7.35□□□□□ -1.23
CTDSPL2-211ENST00000561189 CERKQ8TCT0 537 aa7.35□□□□□ -1.23
CTDSPL2-211ENST00000561189 DDX12PQ92771 950 aa7.35□□□□□ -1.23
CTDSPL2-211ENST00000561189 PPP1R3GB7ZBB8 358 aa7.34□□□□□ -1.23
CTDSPL2-211ENST00000561189 KCNH8Q96L42 1107 aa7.34□□□□□ -1.23
CTDSPL2-211ENST00000561189 RBM27Q9P2N5 1060 aaKnown RBP7.34□□□□□ -1.23
CTDSPL2-211ENST00000561189 ONECUT3O60422 494 aaPredicted RBP7.33□□□□□ -1.24
CTDSPL2-211ENST00000561189 MLLT3P42568 568 aaPredicted RBP7.33□□□□□ -1.24
CTDSPL2-211ENST00000561189 LSM11P83369 360 aaKnown RBP eCLIP7.33□□□□□ -1.24
CTDSPL2-211ENST00000561189 C6orf132Q5T0Z8 1188 aa7.33□□□□□ -1.24
CTDSPL2-211ENST00000561189 GRXCR2A6NFK2 248 aa7.31□□□□□ -1.24
CTDSPL2-211ENST00000561189 PRIM1P49642 420 aaKnown RBP7.31□□□□□ -1.24
CTDSPL2-211ENST00000561189 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.31□□□□□ -1.24
CTDSPL2-211ENST00000561189 SPNS2Q8IVW8 549 aa7.31□□□□□ -1.24
CTDSPL2-211ENST00000561189 ZBED2Q9BTP6 218 aa7.3□□□□□ -1.24
CTDSPL2-211ENST00000561189 MAP3K7O43318 606 aa7.29□□□□□ -1.24
CTDSPL2-211ENST00000561189 KCNK17Q96T54 332 aa7.29□□□□□ -1.24
CTDSPL2-211ENST00000561189 MMRN1Q13201 1228 aa7.28□□□□□ -1.24
CTDSPL2-211ENST00000561189 HRO43593 1189 aa7.27□□□□□ -1.25
CTDSPL2-211ENST00000561189 PSEN2P49810 448 aa7.27□□□□□ -1.25
CTDSPL2-211ENST00000561189 TTC13Q8NBP0 860 aa7.27□□□□□ -1.25
CTDSPL2-211ENST00000561189 NPDC1Q9NQX5 325 aaPredicted RBP7.27□□□□□ -1.25
CTDSPL2-211ENST00000561189 COL9A1P20849 921 aa7.26□□□□□ -1.25
CTDSPL2-211ENST00000561189 PTGDRQ13258 359 aa7.26□□□□□ -1.25
CTDSPL2-211ENST00000561189 TSR1Q2NL82 804 aaKnown RBP7.26□□□□□ -1.25
CTDSPL2-211ENST00000561189 DMRTA1Q5VZB9 504 aa7.26□□□□□ -1.25
CTDSPL2-211ENST00000561189 ADGRD1Q6QNK2 874 aa7.26□□□□□ -1.25
CTDSPL2-211ENST00000561189 VPS9D1Q9Y2B5 631 aa7.26□□□□□ -1.25
CTDSPL2-211ENST00000561189 BHMG1C9JSJ3 638 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL2-211ENST00000561189 AXIN2Q9Y2T1 843 aa7.25□□□□□ -1.25
CTDSPL2-211ENST00000561189 TRIM6-TRIM34B2RNG4 842 aa7.24□□□□□ -1.25
CTDSPL2-211ENST00000561189 GPR37O15354 613 aa7.24□□□□□ -1.25
CTDSPL2-211ENST00000561189 PRSS12P56730 875 aa7.24□□□□□ -1.25
CTDSPL2-211ENST00000561189 RBM33Q96EV2 1170 aaKnown RBP7.24□□□□□ -1.25
CTDSPL2-211ENST00000561189 RABGEF1Q9UJ41 708 aa7.24□□□□□ -1.25
CTDSPL2-211ENST00000561189 FCHSD2O94868 740 aa7.23□□□□□ -1.25
CTDSPL2-211ENST00000561189 HIC1Q14526 733 aa7.23□□□□□ -1.25
CTDSPL2-211ENST00000561189 LAPTM4BQ86VI4 370 aa7.22□□□□□ -1.25
CTDSPL2-211ENST00000561189 CDHR5Q9HBB8 845 aa7.22□□□□□ -1.25
CTDSPL2-211ENST00000561189 RBM26Q5T8P6 1007 aaKnown RBP7.21□□□□□ -1.26
CTDSPL2-211ENST00000561189 ZC3H15Q8WU90 426 aaKnown RBP7.21□□□□□ -1.26
CTDSPL2-211ENST00000561189 CDCA7LQ96GN5 454 aa7.21□□□□□ -1.26
CTDSPL2-211ENST00000561189 NBPF3Q9H094 633 aa7.21□□□□□ -1.26
CTDSPL2-211ENST00000561189 GPIHBP1Q8IV16 184 aa7.2□□□□□ -1.26
CTDSPL2-211ENST00000561189 ANKRD13DQ6ZTN6 518 aa7.19□□□□□ -1.26
CTDSPL2-211ENST00000561189 PACS2Q86VP3 889 aa7.19□□□□□ -1.26
CTDSPL2-211ENST00000561189 KRI1Q8N9T8 703 aaKnown RBP7.19□□□□□ -1.26
CTDSPL2-211ENST00000561189 TSKSQ9UJT2 592 aa7.19□□□□□ -1.26
CTDSPL2-211ENST00000561189 NUTM2FA1L443 756 aa7.18□□□□□ -1.26
CTDSPL2-211ENST00000561189 GNPATO15228 680 aa7.18□□□□□ -1.26
CTDSPL2-211ENST00000561189 PROX2Q3B8N5 592 aa7.18□□□□□ -1.26
CTDSPL2-211ENST00000561189 NBPF26B4DH59 902 aa7.17□□□□□ -1.26
CTDSPL2-211ENST00000561189 DAXXQ9UER7 740 aaPredicted RBP7.17□□□□□ -1.26
CTDSPL2-211ENST00000561189 FAM198AQ9UFP1 575 aa7.17□□□□□ -1.26
CTDSPL2-211ENST00000561189 PADI6Q6TGC4 694 aa7.16□□□□□ -1.26
CTDSPL2-211ENST00000561189 KIAA1468Q9P260 1216 aa7.16□□□□□ -1.26
CTDSPL2-211ENST00000561189 NEUROD2Q15784 382 aa7.15□□□□□ -1.26
CTDSPL2-211ENST00000561189 FAM98CQ17RN3 349 aaKnown RBP7.15□□□□□ -1.26
CTDSPL2-211ENST00000561189 TMEM132AQ24JP5 1023 aa7.15□□□□□ -1.26
CTDSPL2-211ENST00000561189 ERICH6Q7L0X2 663 aa7.15□□□□□ -1.26
CTDSPL2-211ENST00000561189 MRPL50Q8N5N7 158 aaKnown RBP7.14□□□□□ -1.27
CTDSPL2-211ENST00000561189 MYT1LQ9UL68 1186 aa7.14□□□□□ -1.27
CTDSPL2-211ENST00000561189 ADGRG1Q9Y653 693 aa7.14□□□□□ -1.27
CTDSPL2-211ENST00000561189 ZMYND10O75800 440 aa7.13□□□□□ -1.27
CTDSPL2-211ENST00000561189 MAP2K5Q13163 448 aa7.13□□□□□ -1.27
CTDSPL2-211ENST00000561189 TATDN2Q93075 761 aa7.13□□□□□ -1.27
CTDSPL2-211ENST00000561189 EYA1Q99502 592 aa7.13□□□□□ -1.27
CTDSPL2-211ENST00000561189 SLC24A3Q9HC58 644 aa7.13□□□□□ -1.27
CTDSPL2-211ENST00000561189 OATP04181 439 aa7.12□□□□□ -1.27
CTDSPL2-211ENST00000561189 MINK1Q8N4C8 1332 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-211ENST00000561189 BARGINQ6ZT62 677 aa7.11□□□□□ -1.27
CTDSPL2-211ENST00000561189 AK7Q96M32 723 aa7.11□□□□□ -1.27
CTDSPL2-211ENST00000561189 RBM46Q8TBY0 533 aaKnown RBP7.1□□□□□ -1.27
CTDSPL2-211ENST00000561189 PXYLP1Q8TE99 480 aa7.1□□□□□ -1.27
CTDSPL2-211ENST00000561189 RNF166Q96A37 237 aaPredicted RBP7.1□□□□□ -1.27
CTDSPL2-211ENST00000561189 ZFRQ96KR1 1074 aaKnown RBP7.1□□□□□ -1.27
CTDSPL2-211ENST00000561189 STAC3Q96MF2 364 aa7.1□□□□□ -1.27
CTDSPL2-211ENST00000561189 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.09□□□□□ -1.27
CTDSPL2-211ENST00000561189 C3orf80F5H4A9 247 aa7.09□□□□□ -1.27
CTDSPL2-211ENST00000561189 NUDT18Q6ZVK8 323 aa7.09□□□□□ -1.27
CTDSPL2-211ENST00000561189 PNMA3Q9UL41 463 aa7.09□□□□□ -1.27
CTDSPL2-211ENST00000561189 IRF6O14896 467 aa7.08□□□□□ -1.28
CTDSPL2-211ENST00000561189 DNAJB2P25686 324 aa7.08□□□□□ -1.28
CTDSPL2-211ENST00000561189 NYAP1Q6ZVC0 841 aa7.08□□□□□ -1.28
CTDSPL2-211ENST00000561189 METTL3Q86U44 580 aaKnown RBP7.08□□□□□ -1.28
CTDSPL2-211ENST00000561189 SOWAHBA6NEL2 793 aa7.07□□□□□ -1.28
CTDSPL2-211ENST00000561189 FECHP22830 423 aa7.07□□□□□ -1.28
CTDSPL2-211ENST00000561189 THSD4Q6ZMP0 1018 aa7.07□□□□□ -1.28
CTDSPL2-211ENST00000561189 ANKK1Q8NFD2 765 aa7.07□□□□□ -1.28
CTDSPL2-211ENST00000561189 NECTIN2Q92692 538 aa7.07□□□□□ -1.28
CTDSPL2-211ENST00000561189 TMEM134Q9H6X4 195 aa7.07□□□□□ -1.28
CTDSPL2-211ENST00000561189 SEPT9Q9UHD8 586 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-211ENST00000561189 GTF3C3Q9Y5Q9 886 aa7.07□□□□□ -1.28
CTDSPL2-211ENST00000561189 BRPF1P55201 1214 aaPredicted RBP7.06□□□□□ -1.28
CTDSPL2-211ENST00000561189 GOLGA8CPA6NN73 597 aa7.05□□□□□ -1.28
CTDSPL2-211ENST00000561189 WNT2BQ93097 391 aa7.05□□□□□ -1.28
CTDSPL2-211ENST00000561189 RCCD1A6NED2 376 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms