RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 EIF4G1Q04637 1599 aaKnown RBP8.44□□□□□ -1.06
HERC1-211ENST00000560983 FBXW7Q969H0 707 aa8.43□□□□□ -1.06
HERC1-211ENST00000560983 ARIH1Q9Y4X5 557 aaPredicted RBP8.43□□□□□ -1.06
HERC1-211ENST00000560983 CUX2O14529 1486 aa8.43□□□□□ -1.06
HERC1-211ENST00000560983 PPP1R3GB7ZBB8 358 aa8.42□□□□□ -1.06
HERC1-211ENST00000560983 TYW1BQ6NUM6 668 aa8.42□□□□□ -1.06
HERC1-211ENST00000560983 PDIA6Q15084 440 aa8.41□□□□□ -1.06
HERC1-211ENST00000560983 SHROOM4Q9ULL8 1493 aa8.4□□□□□ -1.06
HERC1-211ENST00000560983 PAXIP1Q6ZW49 1069 aaPredicted RBP8.4□□□□□ -1.06
HERC1-211ENST00000560983 EPAS1Q99814 870 aa8.4□□□□□ -1.06
HERC1-211ENST00000560983 COL9A1P20849 921 aa8.39□□□□□ -1.07
HERC1-211ENST00000560983 MYO15BQ96JP2 1530 aa8.39□□□□□ -1.07
HERC1-211ENST00000560983 KCTD12Q96CX2 325 aaKnown RBP8.37□□□□□ -1.07
HERC1-211ENST00000560983 SPDYE16A6NNV3 312 aaPredicted RBP8.36□□□□□ -1.07
HERC1-211ENST00000560983 ONECUT3O60422 494 aaPredicted RBP8.36□□□□□ -1.07
HERC1-211ENST00000560983 E2F4Q16254 413 aa8.36□□□□□ -1.07
HERC1-211ENST00000560983 CFAP44Q96MT7 982 aa8.36□□□□□ -1.07
HERC1-211ENST00000560983 RABGEF1Q9UJ41 708 aa8.36□□□□□ -1.07
HERC1-211ENST00000560983 C6orf132Q5T0Z8 1188 aa8.35□□□□□ -1.07
HERC1-211ENST00000560983 THSD4Q6ZMP0 1018 aa8.35□□□□□ -1.07
HERC1-211ENST00000560983 STAC3Q96MF2 364 aa8.35□□□□□ -1.07
HERC1-211ENST00000560983 PROX2Q3B8N5 592 aa8.34□□□□□ -1.07
HERC1-211ENST00000560983 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
HERC1-211ENST00000560983 EN1Q05925 392 aaPredicted RBP8.33□□□□□ -1.08
HERC1-211ENST00000560983 MRPL50Q8N5N7 158 aaKnown RBP8.33□□□□□ -1.08
HERC1-211ENST00000560983 PLA2G2EQ9NZK7 142 aa8.33□□□□□ -1.08
HERC1-211ENST00000560983 DDX12PQ92771 950 aa8.32□□□□□ -1.08
HERC1-211ENST00000560983 LAPTM4BQ86VI4 370 aa8.31□□□□□ -1.08
HERC1-211ENST00000560983 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
HERC1-211ENST00000560983 PRIM1P49642 420 aaKnown RBP8.29□□□□□ -1.08
HERC1-211ENST00000560983 IFFO2Q5TF58 517 aa8.29□□□□□ -1.08
HERC1-211ENST00000560983 WNT2BQ93097 391 aa8.29□□□□□ -1.08
HERC1-211ENST00000560983 NBR1Q14596 966 aa8.28□□□□□ -1.08
HERC1-211ENST00000560983 WDR70Q9NW82 654 aa8.28□□□□□ -1.08
HERC1-211ENST00000560983 KIAA1468Q9P260 1216 aa8.28□□□□□ -1.08
HERC1-211ENST00000560983 TSR1Q2NL82 804 aaKnown RBP8.27□□□□□ -1.09
HERC1-211ENST00000560983 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
HERC1-211ENST00000560983 PTPN5P54829 565 aa8.26□□□□□ -1.09
HERC1-211ENST00000560983 RBM33Q96EV2 1170 aaKnown RBP8.26□□□□□ -1.09
HERC1-211ENST00000560983 ERCC6Q03468 1493 aa8.26□□□□□ -1.09
HERC1-211ENST00000560983 OSBPP22059 807 aa8.25□□□□□ -1.09
HERC1-211ENST00000560983 TSHZ2Q9NRE2 1034 aa8.25□□□□□ -1.09
HERC1-211ENST00000560983 ZFRQ96KR1 1074 aaKnown RBP8.24□□□□□ -1.09
HERC1-211ENST00000560983 TSKSQ9UJT2 592 aa8.24□□□□□ -1.09
HERC1-211ENST00000560983 SOWAHBA6NEL2 793 aa8.23□□□□□ -1.09
HERC1-211ENST00000560983 MAP3K7O43318 606 aa8.23□□□□□ -1.09
HERC1-211ENST00000560983 ANKK1Q8NFD2 765 aa8.23□□□□□ -1.09
HERC1-211ENST00000560983 CERKQ8TCT0 537 aa8.23□□□□□ -1.09
HERC1-211ENST00000560983 FAM98CQ17RN3 349 aaKnown RBP8.22□□□□□ -1.09
HERC1-211ENST00000560983 FAM198AQ9UFP1 575 aa8.22□□□□□ -1.09
HERC1-211ENST00000560983 SEPT9Q9UHD8 586 aaPredicted RBP8.21□□□□□ -1.1
HERC1-211ENST00000560983 GRXCR2A6NFK2 248 aa8.2□□□□□ -1.1
HERC1-211ENST00000560983 BCAMP50895 628 aa8.2□□□□□ -1.1
HERC1-211ENST00000560983 PRSS12P56730 875 aa8.2□□□□□ -1.1
HERC1-211ENST00000560983 CDCA7LQ96GN5 454 aa8.2□□□□□ -1.1
HERC1-211ENST00000560983 RBM27Q9P2N5 1060 aaKnown RBP8.2□□□□□ -1.1
HERC1-211ENST00000560983 SCRIBQ14160 1630 aa8.2□□□□□ -1.1
HERC1-211ENST00000560983 ITGBL1O95965 494 aaPredicted RBP8.19□□□□□ -1.1
HERC1-211ENST00000560983 NYAP1Q6ZVC0 841 aa8.19□□□□□ -1.1
HERC1-211ENST00000560983 ARHGEF1Q92888 912 aaKnown RBP8.19□□□□□ -1.1
HERC1-211ENST00000560983 CDHR5Q9HBB8 845 aa8.19□□□□□ -1.1
HERC1-211ENST00000560983 PACS2Q86VP3 889 aa8.18□□□□□ -1.1
HERC1-211ENST00000560983 TTC13Q8NBP0 860 aa8.18□□□□□ -1.1
HERC1-211ENST00000560983 KCNV2Q8TDN2 545 aa8.18□□□□□ -1.1
HERC1-211ENST00000560983 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
HERC1-211ENST00000560983 NPDC1Q9NQX5 325 aaPredicted RBP8.17□□□□□ -1.1
HERC1-211ENST00000560983 A0A0G2JS52 829 aa8.15□□□□□ -1.1
HERC1-211ENST00000560983 RGS20O76081 388 aa8.15□□□□□ -1.1
HERC1-211ENST00000560983 WBP1LQ9NX94 342 aa8.15□□□□□ -1.1
HERC1-211ENST00000560983 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.14□□□□□ -1.11
HERC1-211ENST00000560983 TSR3Q9UJK0 312 aaKnown RBP8.14□□□□□ -1.11
HERC1-211ENST00000560983 TATDN2Q93075 761 aa8.13□□□□□ -1.11
HERC1-211ENST00000560983 LRCH3Q96II8 777 aa8.13□□□□□ -1.11
HERC1-211ENST00000560983 NBPF26B4DH59 902 aa8.12□□□□□ -1.11
HERC1-211ENST00000560983 MLLT3P42568 568 aaPredicted RBP8.12□□□□□ -1.11
HERC1-211ENST00000560983 SMAPO00193 183 aa8.11□□□□□ -1.11
HERC1-211ENST00000560983 HPS5Q9UPZ3 1129 aa8.11□□□□□ -1.11
HERC1-211ENST00000560983 PNMA3Q9UL41 463 aa8.1□□□□□ -1.11
HERC1-211ENST00000560983 PLCB2Q00722 1185 aa8.09□□□□□ -1.11
HERC1-211ENST00000560983 PADI6Q6TGC4 694 aa8.09□□□□□ -1.11
HERC1-211ENST00000560983 SAMD7Q7Z3H4 446 aa8.09□□□□□ -1.11
HERC1-211ENST00000560983 NESP48681 1621 aa8.09□□□□□ -1.11
HERC1-211ENST00000560983 DCAF1Q9Y4B6 1507 aa8.08□□□□□ -1.12
HERC1-211ENST00000560983 NCAPD3P42695 1498 aa8.08□□□□□ -1.12
HERC1-211ENST00000560983 NUDT18Q6ZVK8 323 aa8.08□□□□□ -1.12
HERC1-211ENST00000560983 P3H3Q8IVL6 736 aa8.08□□□□□ -1.12
HERC1-211ENST00000560983 PTGDRQ13258 359 aa8.06□□□□□ -1.12
HERC1-211ENST00000560983 EYA1Q99502 592 aa8.06□□□□□ -1.12
HERC1-211ENST00000560983 PPP4CP60510 307 aa8.05□□□□□ -1.12
HERC1-211ENST00000560983 KCNC4Q03721 635 aa8.05□□□□□ -1.12
HERC1-211ENST00000560983 ZCCHC6Q5VYS8 1495 aaKnown RBP8.03□□□□□ -1.12
HERC1-211ENST00000560983 TJAP1Q5JTD0 557 aa8.03□□□□□ -1.12
HERC1-211ENST00000560983 THOC2Q8NI27 1593 aaKnown RBP8.01□□□□□ -1.13
HERC1-211ENST00000560983 SEMA3EO15041 775 aa8.01□□□□□ -1.13
HERC1-211ENST00000560983 SWT1Q5T5J6 900 aaKnown RBP8.01□□□□□ -1.13
HERC1-211ENST00000560983 ADGRG1Q9Y653 693 aa8□□□□□ -1.13
HERC1-211ENST00000560983 TESPA1A2RU30 521 aaPredicted RBP7.99□□□□□ -1.13
HERC1-211ENST00000560983 APLP1P51693 650 aa7.99□□□□□ -1.13
HERC1-211ENST00000560983 NECTIN2Q92692 538 aa7.99□□□□□ -1.13
HERC1-211ENST00000560983 SLF2Q8IX21 1173 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms