RNA–Protein interactions for RNA: ENST00000560339.1

AC066612.1-201, humanhuman

TSL 3

Gene AC066612.1, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC066612.1-201ENST00000560339 IFFO2Q5TF58 517 aa8.63□□□□□ -1.03
AC066612.1-201ENST00000560339 DPYSL4O14531 572 aa8.62□□□□□ -1.03
AC066612.1-201ENST00000560339 A0A0G2JS52 829 aa8.6□□□□□ -1.03
AC066612.1-201ENST00000560339 RGS20O76081 388 aa8.6□□□□□ -1.03
AC066612.1-201ENST00000560339 EPAS1Q99814 870 aa8.6□□□□□ -1.03
AC066612.1-201ENST00000560339 KIAA1468Q9P260 1216 aa8.6□□□□□ -1.03
AC066612.1-201ENST00000560339 BCAMP50895 628 aa8.59□□□□□ -1.03
AC066612.1-201ENST00000560339 C6orf132Q5T0Z8 1188 aa8.59□□□□□ -1.03
AC066612.1-201ENST00000560339 LAPTM4BQ86VI4 370 aa8.59□□□□□ -1.03
AC066612.1-201ENST00000560339 RBM33Q96EV2 1170 aaKnown RBP8.59□□□□□ -1.03
AC066612.1-201ENST00000560339 CAMK2BQ13554 666 aa8.58□□□□□ -1.04
AC066612.1-201ENST00000560339 DDX12PQ92771 950 aa8.57□□□□□ -1.04
AC066612.1-201ENST00000560339 ZFRQ96KR1 1074 aaKnown RBP8.57□□□□□ -1.04
AC066612.1-201ENST00000560339 SEPT9Q9UHD8 586 aaPredicted RBP8.57□□□□□ -1.04
AC066612.1-201ENST00000560339 SOWAHBA6NEL2 793 aa8.56□□□□□ -1.04
AC066612.1-201ENST00000560339 IRX2Q9BZI1 471 aaPredicted RBP8.56□□□□□ -1.04
AC066612.1-201ENST00000560339 ONECUT3O60422 494 aaPredicted RBP8.55□□□□□ -1.04
AC066612.1-201ENST00000560339 TRIM6-TRIM34B2RNG4 842 aa8.54□□□□□ -1.04
AC066612.1-201ENST00000560339 NYAP1Q6ZVC0 841 aa8.53□□□□□ -1.04
AC066612.1-201ENST00000560339 BBXQ8WY36 941 aaPredicted RBP8.53□□□□□ -1.04
AC066612.1-201ENST00000560339 MAP3K7O43318 606 aa8.52□□□□□ -1.05
AC066612.1-201ENST00000560339 ITGBL1O95965 494 aaPredicted RBP8.52□□□□□ -1.05
AC066612.1-201ENST00000560339 NBR1Q14596 966 aa8.52□□□□□ -1.05
AC066612.1-201ENST00000560339 FAM98CQ17RN3 349 aaKnown RBP8.52□□□□□ -1.05
AC066612.1-201ENST00000560339 WBP1LQ9NX94 342 aa8.52□□□□□ -1.05
AC066612.1-201ENST00000560339 LRCH3Q96II8 777 aa8.51□□□□□ -1.05
AC066612.1-201ENST00000560339 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.51□□□□□ -1.05
AC066612.1-201ENST00000560339 HPS5Q9UPZ3 1129 aa8.5□□□□□ -1.05
AC066612.1-201ENST00000560339 KCNC4Q03721 635 aa8.49□□□□□ -1.05
AC066612.1-201ENST00000560339 EN1Q05925 392 aaPredicted RBP8.49□□□□□ -1.05
AC066612.1-201ENST00000560339 PACS2Q86VP3 889 aa8.49□□□□□ -1.05
AC066612.1-201ENST00000560339 PDIA6Q15084 440 aa8.48□□□□□ -1.05
AC066612.1-201ENST00000560339 TSR1Q2NL82 804 aaKnown RBP8.48□□□□□ -1.05
AC066612.1-201ENST00000560339 SPRYD3Q8NCJ5 442 aa8.48□□□□□ -1.05
AC066612.1-201ENST00000560339 TSR3Q9UJK0 312 aaKnown RBP8.48□□□□□ -1.05
AC066612.1-201ENST00000560339 SPDYE16A6NNV3 312 aaPredicted RBP8.47□□□□□ -1.05
AC066612.1-201ENST00000560339 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.47□□□□□ -1.05
AC066612.1-201ENST00000560339 TSKSQ9UJT2 592 aa8.46□□□□□ -1.06
AC066612.1-201ENST00000560339 PPP4CP60510 307 aa8.44□□□□□ -1.06
AC066612.1-201ENST00000560339 WDR70Q9NW82 654 aa8.44□□□□□ -1.06
AC066612.1-201ENST00000560339 GRXCR2A6NFK2 248 aa8.43□□□□□ -1.06
AC066612.1-201ENST00000560339 E2F4Q16254 413 aa8.43□□□□□ -1.06
AC066612.1-201ENST00000560339 CDCA7LQ96GN5 454 aa8.43□□□□□ -1.06
AC066612.1-201ENST00000560339 SMAPO00193 183 aa8.42□□□□□ -1.06
AC066612.1-201ENST00000560339 PRSS12P56730 875 aa8.41□□□□□ -1.06
AC066612.1-201ENST00000560339 CERKQ8TCT0 537 aa8.41□□□□□ -1.06
AC066612.1-201ENST00000560339 Q6ZNB5 142 aa8.4□□□□□ -1.06
AC066612.1-201ENST00000560339 SAMD7Q7Z3H4 446 aa8.4□□□□□ -1.06
AC066612.1-201ENST00000560339 CFAP44Q96MT7 982 aa8.4□□□□□ -1.06
AC066612.1-201ENST00000560339 NBPF26B4DH59 902 aa8.39□□□□□ -1.07
AC066612.1-201ENST00000560339 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
AC066612.1-201ENST00000560339 RNF40O75150 1001 aa8.38□□□□□ -1.07
AC066612.1-201ENST00000560339 PAXIP1Q6ZW49 1069 aaPredicted RBP8.38□□□□□ -1.07
AC066612.1-201ENST00000560339 HDGFP51858 240 aaKnown RBP8.37□□□□□ -1.07
AC066612.1-201ENST00000560339 TATDN2Q93075 761 aa8.37□□□□□ -1.07
AC066612.1-201ENST00000560339 FAM198AQ9UFP1 575 aa8.37□□□□□ -1.07
AC066612.1-201ENST00000560339 PRIM1P49642 420 aaKnown RBP8.36□□□□□ -1.07
AC066612.1-201ENST00000560339 CDHR5Q9HBB8 845 aa8.35□□□□□ -1.07
AC066612.1-201ENST00000560339 NUDT18Q6ZVK8 323 aa8.34□□□□□ -1.07
AC066612.1-201ENST00000560339 ARIH1Q9Y4X5 557 aaPredicted RBP8.34□□□□□ -1.07
AC066612.1-201ENST00000560339 C3orf80F5H4A9 247 aa8.33□□□□□ -1.08
AC066612.1-201ENST00000560339 TJAP1Q5JTD0 557 aa8.33□□□□□ -1.08
AC066612.1-201ENST00000560339 MTRQ99707 1265 aa8.33□□□□□ -1.08
AC066612.1-201ENST00000560339 OSBPP22059 807 aa8.32□□□□□ -1.08
AC066612.1-201ENST00000560339 AMER1Q5JTC6 1135 aaPredicted RBP8.32□□□□□ -1.08
AC066612.1-201ENST00000560339 IL21Q9HBE4 155 aa8.32□□□□□ -1.08
AC066612.1-201ENST00000560339 LAPTM4AQ15012 233 aa8.31□□□□□ -1.08
AC066612.1-201ENST00000560339 PRKD2Q9BZL6 878 aa8.3□□□□□ -1.08
AC066612.1-201ENST00000560339 RBM27Q9P2N5 1060 aaKnown RBP8.3□□□□□ -1.08
AC066612.1-201ENST00000560339 GFRA3O60609 400 aa8.29□□□□□ -1.08
AC066612.1-201ENST00000560339 SLC4A3P48751 1232 aa8.28□□□□□ -1.08
AC066612.1-201ENST00000560339 PPP1R18Q6NYC8 613 aa8.28□□□□□ -1.08
AC066612.1-201ENST00000560339 PADI6Q6TGC4 694 aa8.28□□□□□ -1.08
AC066612.1-201ENST00000560339 ZNF516Q92618 1163 aa8.28□□□□□ -1.08
AC066612.1-201ENST00000560339 NECTIN2Q92692 538 aa8.28□□□□□ -1.08
AC066612.1-201ENST00000560339 APLP1P51693 650 aa8.27□□□□□ -1.09
AC066612.1-201ENST00000560339 SWT1Q5T5J6 900 aaKnown RBP8.27□□□□□ -1.09
AC066612.1-201ENST00000560339 SLF2Q8IX21 1173 aa8.26□□□□□ -1.09
AC066612.1-201ENST00000560339 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.26□□□□□ -1.09
AC066612.1-201ENST00000560339 COPS2P61201 443 aa8.25□□□□□ -1.09
AC066612.1-201ENST00000560339 RTN4Q9NQC3 1192 aaKnown RBP8.25□□□□□ -1.09
AC066612.1-201ENST00000560339 TRAF7Q6Q0C0 670 aa8.24□□□□□ -1.09
AC066612.1-201ENST00000560339 GGCXP38435 758 aa8.23□□□□□ -1.09
AC066612.1-201ENST00000560339 TTC13Q8NBP0 860 aa8.23□□□□□ -1.09
AC066612.1-201ENST00000560339 NKX2-3Q8TAU0 364 aa8.23□□□□□ -1.09
AC066612.1-201ENST00000560339 NPDC1Q9NQX5 325 aaPredicted RBP8.23□□□□□ -1.09
AC066612.1-201ENST00000560339 V9GY48 417 aaPredicted RBP8.23□□□□□ -1.09
AC066612.1-201ENST00000560339 NRG2O14511 850 aaPredicted RBP8.21□□□□□ -1.1
AC066612.1-201ENST00000560339 EYA1Q99502 592 aa8.19□□□□□ -1.1
AC066612.1-201ENST00000560339 PRR14Q9BWN1 585 aa8.19□□□□□ -1.1
AC066612.1-201ENST00000560339 ZPR1O75312 459 aa8.18□□□□□ -1.1
AC066612.1-201ENST00000560339 MLLT3P42568 568 aaPredicted RBP8.18□□□□□ -1.1
AC066612.1-201ENST00000560339 ARHGEF1Q92888 912 aaKnown RBP8.18□□□□□ -1.1
AC066612.1-201ENST00000560339 PCDHB3Q9Y5E6 796 aa8.18□□□□□ -1.1
AC066612.1-201ENST00000560339 LCE2BO14633 110 aa8.17□□□□□ -1.1
AC066612.1-201ENST00000560339 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
AC066612.1-201ENST00000560339 TMUB1Q9BVT8 246 aa8.16□□□□□ -1.1
AC066612.1-201ENST00000560339 DNAJB2P25686 324 aa8.15□□□□□ -1.1
AC066612.1-201ENST00000560339 RBM46Q8TBY0 533 aaKnown RBP8.15□□□□□ -1.1
AC066612.1-201ENST00000560339 NUTM2FA1L443 756 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms