RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 DPYSL4O14531 572 aa13.04□□□□□ -0.32
CRNDE-208ENST00000560029 PHF14O94880 888 aa13.04□□□□□ -0.32
CRNDE-208ENST00000560029 KIAA1468Q9P260 1216 aa13.04□□□□□ -0.32
CRNDE-208ENST00000560029 IFFO2Q5TF58 517 aa13.03□□□□□ -0.32
CRNDE-208ENST00000560029 A0A0G2JS52 829 aa13.02□□□□□ -0.33
CRNDE-208ENST00000560029 ANKK1Q8NFD2 765 aa13.02□□□□□ -0.33
CRNDE-208ENST00000560029 FBXW7Q969H0 707 aa13.02□□□□□ -0.33
CRNDE-208ENST00000560029 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.33
CRNDE-208ENST00000560029 SEPT9Q9UHD8 586 aaPredicted RBP13□□□□□ -0.33
CRNDE-208ENST00000560029 C6orf132Q5T0Z8 1188 aa12.99□□□□□ -0.33
CRNDE-208ENST00000560029 DDX12PQ92771 950 aa12.98□□□□□ -0.33
CRNDE-208ENST00000560029 CAMK2BQ13554 666 aa12.97□□□□□ -0.33
CRNDE-208ENST00000560029 ZFRQ96KR1 1074 aaKnown RBP12.96□□□□□ -0.33
CRNDE-208ENST00000560029 SOWAHBA6NEL2 793 aa12.95□□□□□ -0.34
CRNDE-208ENST00000560029 IRX2Q9BZI1 471 aaPredicted RBP12.95□□□□□ -0.34
CRNDE-208ENST00000560029 EPAS1Q99814 870 aa12.94□□□□□ -0.34
CRNDE-208ENST00000560029 WBP1LQ9NX94 342 aa12.94□□□□□ -0.34
CRNDE-208ENST00000560029 RGS20O76081 388 aa12.93□□□□□ -0.34
CRNDE-208ENST00000560029 LAPTM4BQ86VI4 370 aa12.93□□□□□ -0.34
CRNDE-208ENST00000560029 TRIM6-TRIM34B2RNG4 842 aa12.9□□□□□ -0.34
CRNDE-208ENST00000560029 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
CRNDE-208ENST00000560029 TSR1Q2NL82 804 aaKnown RBP12.87□□□□□ -0.35
CRNDE-208ENST00000560029 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
CRNDE-208ENST00000560029 NBR1Q14596 966 aa12.86□□□□□ -0.35
CRNDE-208ENST00000560029 MAP3K7O43318 606 aa12.84□□□□□ -0.35
CRNDE-208ENST00000560029 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
CRNDE-208ENST00000560029 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.83□□□□□ -0.36
CRNDE-208ENST00000560029 TSKSQ9UJT2 592 aa12.83□□□□□ -0.36
CRNDE-208ENST00000560029 HPS5Q9UPZ3 1129 aa12.83□□□□□ -0.36
CRNDE-208ENST00000560029 KCNC4Q03721 635 aa12.81□□□□□ -0.36
CRNDE-208ENST00000560029 BBXQ8WY36 941 aaPredicted RBP12.81□□□□□ -0.36
CRNDE-208ENST00000560029 LRCH3Q96II8 777 aa12.81□□□□□ -0.36
CRNDE-208ENST00000560029 SMAPO00193 183 aa12.8□□□□□ -0.36
CRNDE-208ENST00000560029 EN1Q05925 392 aaPredicted RBP12.8□□□□□ -0.36
CRNDE-208ENST00000560029 TSR3Q9UJK0 312 aaKnown RBP12.8□□□□□ -0.36
CRNDE-208ENST00000560029 NYAP1Q6ZVC0 841 aa12.79□□□□□ -0.36
CRNDE-208ENST00000560029 PACS2Q86VP3 889 aa12.78□□□□□ -0.36
CRNDE-208ENST00000560029 PRIM1P49642 420 aaKnown RBP12.77□□□□□ -0.37
CRNDE-208ENST00000560029 PDIA6Q15084 440 aa12.77□□□□□ -0.37
CRNDE-208ENST00000560029 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
CRNDE-208ENST00000560029 FAM198AQ9UFP1 575 aa12.75□□□□□ -0.37
CRNDE-208ENST00000560029 GRXCR2A6NFK2 248 aa12.74□□□□□ -0.37
CRNDE-208ENST00000560029 CDCA7LQ96GN5 454 aa12.74□□□□□ -0.37
CRNDE-208ENST00000560029 PPP4CP60510 307 aa12.73□□□□□ -0.37
CRNDE-208ENST00000560029 SPRYD3Q8NCJ5 442 aa12.73□□□□□ -0.37
CRNDE-208ENST00000560029 SAMD7Q7Z3H4 446 aa12.72□□□□□ -0.37
CRNDE-208ENST00000560029 Q6ZNB5 142 aa12.71□□□□□ -0.37
CRNDE-208ENST00000560029 SPDYE16A6NNV3 312 aaPredicted RBP12.7□□□□□ -0.38
CRNDE-208ENST00000560029 PRSS12P56730 875 aa12.7□□□□□ -0.38
CRNDE-208ENST00000560029 E2F4Q16254 413 aa12.69□□□□□ -0.38
CRNDE-208ENST00000560029 CDHR5Q9HBB8 845 aa12.67□□□□□ -0.38
CRNDE-208ENST00000560029 PNMA3Q9UL41 463 aa12.67□□□□□ -0.38
CRNDE-208ENST00000560029 TJAP1Q5JTD0 557 aa12.65□□□□□ -0.38
CRNDE-208ENST00000560029 TATDN2Q93075 761 aa12.65□□□□□ -0.38
CRNDE-208ENST00000560029 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
CRNDE-208ENST00000560029 RNF40O75150 1001 aa12.63□□□□□ -0.39
CRNDE-208ENST00000560029 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
CRNDE-208ENST00000560029 WDR70Q9NW82 654 aa12.63□□□□□ -0.39
CRNDE-208ENST00000560029 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.63□□□□□ -0.39
CRNDE-208ENST00000560029 OSBPP22059 807 aa12.62□□□□□ -0.39
CRNDE-208ENST00000560029 NUDT18Q6ZVK8 323 aa12.62□□□□□ -0.39
CRNDE-208ENST00000560029 MTRQ99707 1265 aa12.61□□□□□ -0.39
CRNDE-208ENST00000560029 NBPF26B4DH59 902 aa12.59□□□□□ -0.39
CRNDE-208ENST00000560029 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
CRNDE-208ENST00000560029 ZNF516Q92618 1163 aa12.59□□□□□ -0.39
CRNDE-208ENST00000560029 GFRA3O60609 400 aa12.57□□□□□ -0.4
CRNDE-208ENST00000560029 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
CRNDE-208ENST00000560029 PPP1R18Q6NYC8 613 aa12.56□□□□□ -0.4
CRNDE-208ENST00000560029 ARIH1Q9Y4X5 557 aaPredicted RBP12.56□□□□□ -0.4
CRNDE-208ENST00000560029 LCE2BO14633 110 aa12.55□□□□□ -0.4
CRNDE-208ENST00000560029 APLP1P51693 650 aa12.55□□□□□ -0.4
CRNDE-208ENST00000560029 IL21Q9HBE4 155 aa12.55□□□□□ -0.4
CRNDE-208ENST00000560029 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
CRNDE-208ENST00000560029 NKX2-3Q8TAU0 364 aa12.54□□□□□ -0.4
CRNDE-208ENST00000560029 HDGFP51858 240 aaKnown RBP12.53□□□□□ -0.4
CRNDE-208ENST00000560029 NPDC1Q9NQX5 325 aaPredicted RBP12.52□□□□□ -0.41
CRNDE-208ENST00000560029 PADI6Q6TGC4 694 aa12.51□□□□□ -0.41
CRNDE-208ENST00000560029 SWT1Q5T5J6 900 aaKnown RBP12.5□□□□□ -0.41
CRNDE-208ENST00000560029 COPS2P61201 443 aa12.49□□□□□ -0.41
CRNDE-208ENST00000560029 LAPTM4AQ15012 233 aa12.48□□□□□ -0.41
CRNDE-208ENST00000560029 TRAF7Q6Q0C0 670 aa12.47□□□□□ -0.41
CRNDE-208ENST00000560029 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.47□□□□□ -0.41
CRNDE-208ENST00000560029 TTC13Q8NBP0 860 aa12.46□□□□□ -0.41
CRNDE-208ENST00000560029 RBM27Q9P2N5 1060 aaKnown RBP12.46□□□□□ -0.41
CRNDE-208ENST00000560029 MLLT3P42568 568 aaPredicted RBP12.42□□□□□ -0.42
CRNDE-208ENST00000560029 PLCB2Q00722 1185 aa12.42□□□□□ -0.42
CRNDE-208ENST00000560029 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
CRNDE-208ENST00000560029 NRG2O14511 850 aaPredicted RBP12.4□□□□□ -0.42
CRNDE-208ENST00000560029 EYA1Q99502 592 aa12.4□□□□□ -0.42
CRNDE-208ENST00000560029 V9GY48 417 aaPredicted RBP12.4□□□□□ -0.42
CRNDE-208ENST00000560029 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
CRNDE-208ENST00000560029 ZPR1O75312 459 aa12.35□□□□□ -0.43
CRNDE-208ENST00000560029 TSHZ2Q9NRE2 1034 aa12.34□□□□□ -0.43
CRNDE-208ENST00000560029 GGCXP38435 758 aa12.33□□□□□ -0.44
CRNDE-208ENST00000560029 FAM161AQ3B820 660 aa12.33□□□□□ -0.44
CRNDE-208ENST00000560029 BLOC1S3Q6QNY0 202 aa12.33□□□□□ -0.44
CRNDE-208ENST00000560029 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
CRNDE-208ENST00000560029 PCDHB3Q9Y5E6 796 aa12.33□□□□□ -0.44
CRNDE-208ENST00000560029 SLC4A3P48751 1232 aa12.31□□□□□ -0.44
CRNDE-208ENST00000560029 TLL1O43897 1013 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms