RNA–Protein interactions for RNA: ENST00000559995.1

INO80-206, Transcript of INO80 complex subunit, humanhuman

TSL 5

Gene INO80, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-206ENST00000559995 RBM33Q96EV2 1170 aaKnown RBP11.57□□□□□ -0.56
INO80-206ENST00000559995 DMRTA1Q5VZB9 504 aa11.56□□□□□ -0.56
INO80-206ENST00000559995 TK2O00142 265 aa11.53□□□□□ -0.56
INO80-206ENST00000559995 MAP3K7O43318 606 aa11.53□□□□□ -0.56
INO80-206ENST00000559995 C6orf132Q5T0Z8 1188 aa11.53□□□□□ -0.56
INO80-206ENST00000559995 ADGRD1Q6QNK2 874 aa11.53□□□□□ -0.56
INO80-206ENST00000559995 EN1Q05925 392 aaPredicted RBP11.52□□□□□ -0.57
INO80-206ENST00000559995 PPP1R3GB7ZBB8 358 aa11.51□□□□□ -0.57
INO80-206ENST00000559995 MMRN1Q13201 1228 aa11.5□□□□□ -0.57
INO80-206ENST00000559995 OSBPP22059 807 aa11.49□□□□□ -0.57
INO80-206ENST00000559995 STAC3Q96MF2 364 aa11.49□□□□□ -0.57
INO80-206ENST00000559995 SEMA3EO15041 775 aa11.48□□□□□ -0.57
INO80-206ENST00000559995 MLLT3P42568 568 aaPredicted RBP11.48□□□□□ -0.57
INO80-206ENST00000559995 ZBED2Q9BTP6 218 aa11.48□□□□□ -0.57
INO80-206ENST00000559995 SLC4A5Q9BY07 1137 aa11.48□□□□□ -0.57
INO80-206ENST00000559995 VPS9D1Q9Y2B5 631 aa11.48□□□□□ -0.57
INO80-206ENST00000559995 COL9A1P20849 921 aa11.47□□□□□ -0.57
INO80-206ENST00000559995 MYT1LQ9UL68 1186 aa11.47□□□□□ -0.57
INO80-206ENST00000559995 TSR1Q2NL82 804 aaKnown RBP11.46□□□□□ -0.57
INO80-206ENST00000559995 PRIM1P49642 420 aaKnown RBP11.43□□□□□ -0.58
INO80-206ENST00000559995 HRO43593 1189 aa11.42□□□□□ -0.58
INO80-206ENST00000559995 SMYD5Q6GMV2 418 aa11.42□□□□□ -0.58
INO80-206ENST00000559995 RNF166Q96A37 237 aaPredicted RBP11.42□□□□□ -0.58
INO80-206ENST00000559995 PROX2Q3B8N5 592 aa11.41□□□□□ -0.58
INO80-206ENST00000559995 CERKQ8TCT0 537 aa11.41□□□□□ -0.58
INO80-206ENST00000559995 TESPA1A2RU30 521 aaPredicted RBP11.39□□□□□ -0.59
INO80-206ENST00000559995 NBPF3Q9H094 633 aa11.39□□□□□ -0.59
INO80-206ENST00000559995 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
INO80-206ENST00000559995 RABGEF1Q9UJ41 708 aa11.38□□□□□ -0.59
INO80-206ENST00000559995 TRIM6-TRIM34B2RNG4 842 aa11.37□□□□□ -0.59
INO80-206ENST00000559995 MRPL50Q8N5N7 158 aaKnown RBP11.37□□□□□ -0.59
INO80-206ENST00000559995 CDHR5Q9HBB8 845 aa11.37□□□□□ -0.59
INO80-206ENST00000559995 GOLGA8CPA6NN73 597 aa11.36□□□□□ -0.59
INO80-206ENST00000559995 BHMG1C9JSJ3 638 aaPredicted RBP11.36□□□□□ -0.59
INO80-206ENST00000559995 KIAA1468Q9P260 1216 aa11.36□□□□□ -0.59
INO80-206ENST00000559995 NUTM2FA1L443 756 aa11.35□□□□□ -0.59
INO80-206ENST00000559995 PRSS12P56730 875 aa11.35□□□□□ -0.59
INO80-206ENST00000559995 PACS2Q86VP3 889 aa11.35□□□□□ -0.59
INO80-206ENST00000559995 CDCA7LQ96GN5 454 aa11.35□□□□□ -0.59
INO80-206ENST00000559995 TULP1O00294 542 aaPredicted RBP11.33□□□□□ -0.6
INO80-206ENST00000559995 KCTD12Q96CX2 325 aaKnown RBP11.31□□□□□ -0.6
INO80-206ENST00000559995 NPDC1Q9NQX5 325 aaPredicted RBP11.31□□□□□ -0.6
INO80-206ENST00000559995 TSKSQ9UJT2 592 aa11.31□□□□□ -0.6
INO80-206ENST00000559995 RBM26Q5T8P6 1007 aaKnown RBP11.3□□□□□ -0.6
INO80-206ENST00000559995 SLC24A1O60721 1099 aa11.29□□□□□ -0.6
INO80-206ENST00000559995 LAPTM4BQ86VI4 370 aa11.29□□□□□ -0.6
INO80-206ENST00000559995 RBM27Q9P2N5 1060 aaKnown RBP11.29□□□□□ -0.6
INO80-206ENST00000559995 PTGDRQ13258 359 aa11.28□□□□□ -0.6
INO80-206ENST00000559995 SEPT9Q9UHD8 586 aaPredicted RBP11.28□□□□□ -0.6
INO80-206ENST00000559995 FCHSD2O94868 740 aa11.27□□□□□ -0.61
INO80-206ENST00000559995 WNT2BQ93097 391 aa11.27□□□□□ -0.61
INO80-206ENST00000559995 NBPF26B4DH59 902 aa11.26□□□□□ -0.61
INO80-206ENST00000559995 PADI6Q6TGC4 694 aa11.26□□□□□ -0.61
INO80-206ENST00000559995 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
INO80-206ENST00000559995 FAM198AQ9UFP1 575 aa11.25□□□□□ -0.61
INO80-206ENST00000559995 PNMA3Q9UL41 463 aa11.25□□□□□ -0.61
INO80-206ENST00000559995 ANKK1Q8NFD2 765 aa11.24□□□□□ -0.61
INO80-206ENST00000559995 TATDN2Q93075 761 aa11.24□□□□□ -0.61
INO80-206ENST00000559995 HCSTQ9UBK5 93 aa11.24□□□□□ -0.61
INO80-206ENST00000559995 ZFRQ96KR1 1074 aaKnown RBP11.23□□□□□ -0.61
INO80-206ENST00000559995 SMAPO00193 183 aa11.22□□□□□ -0.61
INO80-206ENST00000559995 NUDT18Q6ZVK8 323 aa11.22□□□□□ -0.61
INO80-206ENST00000559995 TTC13Q8NBP0 860 aa11.22□□□□□ -0.61
INO80-206ENST00000559995 GPIHBP1Q8IV16 184 aa11.21□□□□□ -0.61
INO80-206ENST00000559995 PTPN5P54829 565 aa11.2□□□□□ -0.62
INO80-206ENST00000559995 HIC1Q14526 733 aa11.2□□□□□ -0.62
INO80-206ENST00000559995 THSD4Q6ZMP0 1018 aa11.2□□□□□ -0.62
INO80-206ENST00000559995 C3orf80F5H4A9 247 aa11.17□□□□□ -0.62
INO80-206ENST00000559995 HDGFP51858 240 aaKnown RBP11.17□□□□□ -0.62
INO80-206ENST00000559995 LRCH3Q96II8 777 aa11.17□□□□□ -0.62
INO80-206ENST00000559995 SOWAHBA6NEL2 793 aa11.16□□□□□ -0.62
INO80-206ENST00000559995 GNPATO15228 680 aa11.16□□□□□ -0.62
INO80-206ENST00000559995 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.16□□□□□ -0.62
INO80-206ENST00000559995 BCAMP50895 628 aa11.15□□□□□ -0.62
INO80-206ENST00000559995 RBM46Q8TBY0 533 aaKnown RBP11.15□□□□□ -0.62
INO80-206ENST00000559995 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.13□□□□□ -0.63
INO80-206ENST00000559995 GPR37O15354 613 aa11.12□□□□□ -0.63
INO80-206ENST00000559995 SAMD7Q7Z3H4 446 aa11.12□□□□□ -0.63
INO80-206ENST00000559995 EYA1Q99502 592 aa11.12□□□□□ -0.63
INO80-206ENST00000559995 ADGRG1Q9Y653 693 aa11.12□□□□□ -0.63
INO80-206ENST00000559995 FAM161AQ3B820 660 aa11.11□□□□□ -0.63
INO80-206ENST00000559995 OATP04181 439 aa11.1□□□□□ -0.63
INO80-206ENST00000559995 LMOD2Q6P5Q4 547 aa11.1□□□□□ -0.63
INO80-206ENST00000559995 FECHP22830 423 aa11.09□□□□□ -0.63
INO80-206ENST00000559995 SLC4A3P48751 1232 aa11.09□□□□□ -0.63
INO80-206ENST00000559995 TSR3Q9UJK0 312 aaKnown RBP11.09□□□□□ -0.63
INO80-206ENST00000559995 HPS5Q9UPZ3 1129 aa11.09□□□□□ -0.63
INO80-206ENST00000559995 RNF40O75150 1001 aa11.08□□□□□ -0.64
INO80-206ENST00000559995 DNAJB2P25686 324 aa11.08□□□□□ -0.64
INO80-206ENST00000559995 PPP4CP60510 307 aa11.08□□□□□ -0.64
INO80-206ENST00000559995 WBP1LQ9NX94 342 aa11.07□□□□□ -0.64
INO80-206ENST00000559995 SWT1Q5T5J6 900 aaKnown RBP11.06□□□□□ -0.64
INO80-206ENST00000559995 NYAP1Q6ZVC0 841 aa11.06□□□□□ -0.64
INO80-206ENST00000559995 RCCD1A6NED2 376 aa11.05□□□□□ -0.64
INO80-206ENST00000559995 SLF2Q8IX21 1173 aa11.05□□□□□ -0.64
INO80-206ENST00000559995 PXYLP1Q8TE99 480 aa11.04□□□□□ -0.64
INO80-206ENST00000559995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.03□□□□□ -0.64
INO80-206ENST00000559995 METTL3Q86U44 580 aaKnown RBP11.03□□□□□ -0.64
INO80-206ENST00000559995 NECTIN2Q92692 538 aa11.03□□□□□ -0.64
INO80-206ENST00000559995 BCANQ96GW7 911 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms