RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 TSPY4P0CV99 314 aa20.47■□□□□ 0.87
RABGGTA-212ENST00000559974 TSPY10P0CW01 314 aa20.47■□□□□ 0.87
RABGGTA-212ENST00000559974 ANKRD50Q9ULJ7 1429 aa20.46■□□□□ 0.87
RABGGTA-212ENST00000559974 MYT1LQ9UL68 1186 aa20.46■□□□□ 0.87
RABGGTA-212ENST00000559974 ZMYM4Q5VZL5 1548 aa20.45■□□□□ 0.86
RABGGTA-212ENST00000559974 RSPH4AQ5TD94 716 aa20.45■□□□□ 0.86
RABGGTA-212ENST00000559974 L3MBTL2Q969R5 705 aa20.45■□□□□ 0.86
RABGGTA-212ENST00000559974 MLH3Q9UHC1 1453 aa20.43■□□□□ 0.86
RABGGTA-212ENST00000559974 DIP2CQ9Y2E4 1556 aa20.42■□□□□ 0.86
RABGGTA-212ENST00000559974 SIGLEC1Q9BZZ2 1709 aa20.42■□□□□ 0.86
RABGGTA-212ENST00000559974 PLXNC1O60486 1568 aa20.42■□□□□ 0.86
RABGGTA-212ENST00000559974 KIF15Q9NS87 1388 aa20.41■□□□□ 0.86
RABGGTA-212ENST00000559974 KDM5DQ9BY66 1539 aa20.4■□□□□ 0.86
RABGGTA-212ENST00000559974 RTEL1-TNFRSF6BF6WH68 1400 aa20.4■□□□□ 0.86
RABGGTA-212ENST00000559974 HSPA5P11021 654 aaKnown RBP20.36■□□□□ 0.85
RABGGTA-212ENST00000559974 ARHGEF40Q8TER5 1519 aa20.36■□□□□ 0.85
RABGGTA-212ENST00000559974 EIF4G2P78344 907 aaKnown RBP eCLIP20.35■□□□□ 0.85
RABGGTA-212ENST00000559974 ANP32CO43423 234 aa20.34■□□□□ 0.85
RABGGTA-212ENST00000559974 PKD2Q13563 968 aa20.34■□□□□ 0.85
RABGGTA-212ENST00000559974 NUP155O75694 1391 aa20.33■□□□□ 0.84
RABGGTA-212ENST00000559974 A2MP01023 1474 aa20.32■□□□□ 0.84
RABGGTA-212ENST00000559974 MAGI2Q86UL8 1455 aa20.32■□□□□ 0.84
RABGGTA-212ENST00000559974 CCER2I3L3R5 266 aa20.32■□□□□ 0.84
RABGGTA-212ENST00000559974 DUOX2Q9NRD8 1548 aa20.32■□□□□ 0.84
RABGGTA-212ENST00000559974 POLR1AO95602 1720 aaPredicted RBP20.31■□□□□ 0.84
RABGGTA-212ENST00000559974 NBPF8Q3BBV2 869 aa20.3■□□□□ 0.84
RABGGTA-212ENST00000559974 ATP10AO60312 1499 aa20.29■□□□□ 0.84
RABGGTA-212ENST00000559974 DHX29Q7Z478 1369 aaKnown RBP20.29■□□□□ 0.84
RABGGTA-212ENST00000559974 WASHC2AQ641Q2 1341 aa20.28■□□□□ 0.84
RABGGTA-212ENST00000559974 UNC13BO14795 1591 aa20.25■□□□□ 0.83
RABGGTA-212ENST00000559974 ERBINQ96RT1 1412 aa20.25■□□□□ 0.83
RABGGTA-212ENST00000559974 FAM135AQ9P2D6 1515 aa20.24■□□□□ 0.83
RABGGTA-212ENST00000559974 KIF3BO15066 747 aa20.24■□□□□ 0.83
RABGGTA-212ENST00000559974 MROH1Q8NDA8 1641 aa20.24■□□□□ 0.83
RABGGTA-212ENST00000559974 SPATA31E1Q6ZUB1 1445 aa20.23■□□□□ 0.83
RABGGTA-212ENST00000559974 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
RABGGTA-212ENST00000559974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.831e-6■■□□□ 13.5
RABGGTA-212ENST00000559974 EIF2AK4Q9P2K8 1649 aaKnown RBP20.21■□□□□ 0.83
RABGGTA-212ENST00000559974 MLECQ14165 292 aa20.2■□□□□ 0.82
RABGGTA-212ENST00000559974 CNTLNQ9NXG0 1405 aa20.2■□□□□ 0.82
RABGGTA-212ENST00000559974 CCDC7Q96M83 1385 aa20.2■□□□□ 0.82
RABGGTA-212ENST00000559974 DEPDC5O75140 1603 aa20.2■□□□□ 0.82
RABGGTA-212ENST00000559974 BCORL1Q5H9F3 1711 aa20.18■□□□□ 0.82
RABGGTA-212ENST00000559974 UHRF1BP1Q6BDS2 1440 aa20.18■□□□□ 0.82
RABGGTA-212ENST00000559974 GGT6Q6P531 493 aa20.18■□□□□ 0.82
RABGGTA-212ENST00000559974 RNF17Q9BXT8 1623 aaKnown RBP20.18■□□□□ 0.82
RABGGTA-212ENST00000559974 IQGAP3Q86VI3 1631 aa20.17■□□□□ 0.82
RABGGTA-212ENST00000559974 ARID4BQ4LE39 1312 aaPredicted RBP20.16■□□□□ 0.82
RABGGTA-212ENST00000559974 C11orf95C9JLR9 678 aaPredicted RBP20.15■□□□□ 0.82
RABGGTA-212ENST00000559974 AGLP35573 1532 aa20.15■□□□□ 0.82
RABGGTA-212ENST00000559974 CEP152O94986 1710 aa20.15■□□□□ 0.82
RABGGTA-212ENST00000559974 RALGAPBQ86X10 1494 aa20.15■□□□□ 0.82
RABGGTA-212ENST00000559974 PRDM15P57071 1507 aaPredicted RBP20.14■□□□□ 0.81
RABGGTA-212ENST00000559974 ZNF326Q5BKZ1 582 aaKnown RBP20.11■□□□□ 0.81
RABGGTA-212ENST00000559974 USP47Q96K76 1375 aa20.11■□□□□ 0.81
RABGGTA-212ENST00000559974 VWDEQ8N2E2 1590 aa20.1■□□□□ 0.81
RABGGTA-212ENST00000559974 KIF7Q2M1P5 1343 aa20.1■□□□□ 0.81
RABGGTA-212ENST00000559974 CCDC144AA2RUR9 1427 aa20.08■□□□□ 0.8
RABGGTA-212ENST00000559974 CLTCQ00610 1675 aaKnown RBP20.07■□□□□ 0.8
RABGGTA-212ENST00000559974 ABCC3O15438 1527 aa20.07■□□□□ 0.8
RABGGTA-212ENST00000559974 CFAP65Q6ZU64 1925 aaKnown RBP20.05■□□□□ 0.8
RABGGTA-212ENST00000559974 PLA2R1Q13018 1463 aa20.04■□□□□ 0.8
RABGGTA-212ENST00000559974 E9PCH4 1651 aa20.03■□□□□ 0.8
RABGGTA-212ENST00000559974 CAMSAP1Q5T5Y3 1602 aa20.03■□□□□ 0.8
RABGGTA-212ENST00000559974 MADDQ8WXG6 1647 aa20.03■□□□□ 0.8
RABGGTA-212ENST00000559974 WASHC2CQ9Y4E1 1318 aa20.03■□□□□ 0.8
RABGGTA-212ENST00000559974 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
RABGGTA-212ENST00000559974 DCAF11Q8TEB1 546 aa20.03■□□□□ 0.8
RABGGTA-212ENST00000559974 SUPT16HQ9Y5B9 1047 aaKnown RBP20.03■□□□□ 0.8
RABGGTA-212ENST00000559974 FER1L4A9Z1Z3 1794 aa20.02■□□□□ 0.8
RABGGTA-212ENST00000559974 TRPM1Q7Z4N2 1603 aa20.02■□□□□ 0.8
RABGGTA-212ENST00000559974 TET3O43151 1660 aa20.01■□□□□ 0.79
RABGGTA-212ENST00000559974 KANK1Q14678 1352 aa20.01■□□□□ 0.79
RABGGTA-212ENST00000559974 PRKRIP1Q9H875 184 aaPredicted RBP20.01■□□□□ 0.79
RABGGTA-212ENST00000559974 KDM2AQ9Y2K7 1162 aa20.01■□□□□ 0.79
RABGGTA-212ENST00000559974 CARD11Q9BXL7 1154 aa20■□□□□ 0.79
RABGGTA-212ENST00000559974 EFCAB6Q5THR3 1501 aa20■□□□□ 0.79
RABGGTA-212ENST00000559974 ADAMTSL3P82987 1691 aa20■□□□□ 0.79
RABGGTA-212ENST00000559974 LMTK2Q8IWU2 1503 aa19.99■□□□□ 0.79
RABGGTA-212ENST00000559974 ZC3H13Q5T200 1668 aaKnown RBP19.99■□□□□ 0.79
RABGGTA-212ENST00000559974 RIMS1Q86UR5 1692 aaKnown RBP19.98■□□□□ 0.79
RABGGTA-212ENST00000559974 PRAG1Q86YV5 1406 aa19.98■□□□□ 0.79
RABGGTA-212ENST00000559974 NPATQ14207 1427 aa19.97■□□□□ 0.79
RABGGTA-212ENST00000559974 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
RABGGTA-212ENST00000559974 CEBPAP49715 358 aaPredicted RBP19.95■□□□□ 0.78
RABGGTA-212ENST00000559974 FBXO31Q5XUX0 539 aaPredicted RBP19.95■□□□□ 0.78
RABGGTA-212ENST00000559974 LAMC1P11047 1609 aa19.95■□□□□ 0.78
RABGGTA-212ENST00000559974 ROCK2O75116 1388 aaKnown RBP19.95■□□□□ 0.78
RABGGTA-212ENST00000559974 C3P01024 1663 aa19.93■□□□□ 0.78
RABGGTA-212ENST00000559974 UGGT1Q9NYU2 1555 aa19.92■□□□□ 0.78
RABGGTA-212ENST00000559974 SPHKAPQ2M3C7 1700 aa19.92■□□□□ 0.78
RABGGTA-212ENST00000559974 ZMYM3Q14202 1370 aa19.92■□□□□ 0.78
RABGGTA-212ENST00000559974 KDM4FA0A1W2PPD8 638 aa19.9■□□□□ 0.78
RABGGTA-212ENST00000559974 HNRNPUQ00839 825 aaKnown RBP eCLIP19.9■□□□□ 0.78
RABGGTA-212ENST00000559974 RGL3Q3MIN7 710 aa19.9■□□□□ 0.78
RABGGTA-212ENST00000559974 MROH2AA6NES4 1674 aa19.9■□□□□ 0.78
RABGGTA-212ENST00000559974 PREX1Q8TCU6 1659 aa19.9■□□□□ 0.78
RABGGTA-212ENST00000559974 CCDC184Q52MB2 194 aa19.9■□□□□ 0.78
RABGGTA-212ENST00000559974 ESF1Q9H501 851 aaKnown RBP19.9■□□□□ 0.78
RABGGTA-212ENST00000559974 GPRASP1Q5JY77 1395 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms