RNA–Protein interactions for RNA: ENST00000559006.1

RAB8B-204, Transcript of RAB8B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB8B, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8B-204ENST00000559006 COL9A1P20849 921 aa11.86□□□□□ -0.51
RAB8B-204ENST00000559006 MRPL50Q8N5N7 158 aaKnown RBP11.86□□□□□ -0.51
RAB8B-204ENST00000559006 PDIA6Q15084 440 aa11.85□□□□□ -0.51
RAB8B-204ENST00000559006 NBPF3Q9H094 633 aa11.85□□□□□ -0.51
RAB8B-204ENST00000559006 RABGEF1Q9UJ41 708 aa11.84□□□□□ -0.51
RAB8B-204ENST00000559006 C6orf132Q5T0Z8 1188 aa11.83□□□□□ -0.52
RAB8B-204ENST00000559006 GOLGA8CPA6NN73 597 aa11.82□□□□□ -0.52
RAB8B-204ENST00000559006 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
RAB8B-204ENST00000559006 E2F4Q16254 413 aa11.82□□□□□ -0.52
RAB8B-204ENST00000559006 PROX2Q3B8N5 592 aa11.82□□□□□ -0.52
RAB8B-204ENST00000559006 THSD4Q6ZMP0 1018 aa11.82□□□□□ -0.52
RAB8B-204ENST00000559006 ARIH1Q9Y4X5 557 aaPredicted RBP11.82□□□□□ -0.52
RAB8B-204ENST00000559006 DDX12PQ92771 950 aa11.81□□□□□ -0.52
RAB8B-204ENST00000559006 ONECUT3O60422 494 aaPredicted RBP11.8□□□□□ -0.52
RAB8B-204ENST00000559006 PTPN5P54829 565 aa11.8□□□□□ -0.52
RAB8B-204ENST00000559006 WNT2BQ93097 391 aa11.8□□□□□ -0.52
RAB8B-204ENST00000559006 WDR70Q9NW82 654 aa11.79□□□□□ -0.52
RAB8B-204ENST00000559006 LAPTM4BQ86VI4 370 aa11.76□□□□□ -0.53
RAB8B-204ENST00000559006 RBM33Q96EV2 1170 aaKnown RBP11.76□□□□□ -0.53
RAB8B-204ENST00000559006 EN1Q05925 392 aaPredicted RBP11.75□□□□□ -0.53
RAB8B-204ENST00000559006 KIAA1468Q9P260 1216 aa11.75□□□□□ -0.53
RAB8B-204ENST00000559006 NBR1Q14596 966 aa11.74□□□□□ -0.53
RAB8B-204ENST00000559006 TRIM6-TRIM34B2RNG4 842 aa11.73□□□□□ -0.53
RAB8B-204ENST00000559006 ANKK1Q8NFD2 765 aa11.71□□□□□ -0.53
RAB8B-204ENST00000559006 MAP3K7O43318 606 aa11.7□□□□□ -0.54
RAB8B-204ENST00000559006 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
RAB8B-204ENST00000559006 IFFO2Q5TF58 517 aa11.7□□□□□ -0.54
RAB8B-204ENST00000559006 ZFRQ96KR1 1074 aaKnown RBP11.68□□□□□ -0.54
RAB8B-204ENST00000559006 SOWAHBA6NEL2 793 aa11.67□□□□□ -0.54
RAB8B-204ENST00000559006 SEPT9Q9UHD8 586 aaPredicted RBP11.66□□□□□ -0.54
RAB8B-204ENST00000559006 GRXCR2A6NFK2 248 aa11.65□□□□□ -0.54
RAB8B-204ENST00000559006 PRIM1P49642 420 aaKnown RBP11.65□□□□□ -0.54
RAB8B-204ENST00000559006 FAM98CQ17RN3 349 aaKnown RBP11.65□□□□□ -0.54
RAB8B-204ENST00000559006 BCAMP50895 628 aa11.64□□□□□ -0.55
RAB8B-204ENST00000559006 PACS2Q86VP3 889 aa11.64□□□□□ -0.55
RAB8B-204ENST00000559006 CERKQ8TCT0 537 aa11.64□□□□□ -0.55
RAB8B-204ENST00000559006 TSKSQ9UJT2 592 aa11.64□□□□□ -0.55
RAB8B-204ENST00000559006 OSBPP22059 807 aa11.63□□□□□ -0.55
RAB8B-204ENST00000559006 TSHZ2Q9NRE2 1034 aa11.63□□□□□ -0.55
RAB8B-204ENST00000559006 NYAP1Q6ZVC0 841 aa11.62□□□□□ -0.55
RAB8B-204ENST00000559006 PRSS12P56730 875 aa11.61□□□□□ -0.55
RAB8B-204ENST00000559006 CDCA7LQ96GN5 454 aa11.61□□□□□ -0.55
RAB8B-204ENST00000559006 ITGBL1O95965 494 aaPredicted RBP11.57□□□□□ -0.56
RAB8B-204ENST00000559006 ARHGEF1Q92888 912 aaKnown RBP11.57□□□□□ -0.56
RAB8B-204ENST00000559006 WBP1LQ9NX94 342 aa11.57□□□□□ -0.56
RAB8B-204ENST00000559006 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.57□□□□□ -0.56
RAB8B-204ENST00000559006 FAM198AQ9UFP1 575 aa11.57□□□□□ -0.56
RAB8B-204ENST00000559006 RGS20O76081 388 aa11.56□□□□□ -0.56
RAB8B-204ENST00000559006 LRCH3Q96II8 777 aa11.56□□□□□ -0.56
RAB8B-204ENST00000559006 A0A0G2JS52 829 aa11.55□□□□□ -0.56
RAB8B-204ENST00000559006 CDHR5Q9HBB8 845 aa11.55□□□□□ -0.56
RAB8B-204ENST00000559006 RBM27Q9P2N5 1060 aaKnown RBP11.55□□□□□ -0.56
RAB8B-204ENST00000559006 TSR3Q9UJK0 312 aaKnown RBP11.55□□□□□ -0.56
RAB8B-204ENST00000559006 NBPF26B4DH59 902 aa11.52□□□□□ -0.57
RAB8B-204ENST00000559006 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
RAB8B-204ENST00000559006 TATDN2Q93075 761 aa11.52□□□□□ -0.57
RAB8B-204ENST00000559006 HPS5Q9UPZ3 1129 aa11.52□□□□□ -0.57
RAB8B-204ENST00000559006 C3orf80F5H4A9 247 aa11.51□□□□□ -0.57
RAB8B-204ENST00000559006 SMAPO00193 183 aa11.51□□□□□ -0.57
RAB8B-204ENST00000559006 NPDC1Q9NQX5 325 aaPredicted RBP11.51□□□□□ -0.57
RAB8B-204ENST00000559006 TTC13Q8NBP0 860 aa11.5□□□□□ -0.57
RAB8B-204ENST00000559006 PNMA3Q9UL41 463 aa11.49□□□□□ -0.57
RAB8B-204ENST00000559006 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
RAB8B-204ENST00000559006 MLLT3P42568 568 aaPredicted RBP11.46□□□□□ -0.57
RAB8B-204ENST00000559006 PPP4CP60510 307 aa11.46□□□□□ -0.57
RAB8B-204ENST00000559006 KCNC4Q03721 635 aa11.46□□□□□ -0.57
RAB8B-204ENST00000559006 NUDT18Q6ZVK8 323 aa11.46□□□□□ -0.57
RAB8B-204ENST00000559006 PADI6Q6TGC4 694 aa11.43□□□□□ -0.58
RAB8B-204ENST00000559006 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
RAB8B-204ENST00000559006 HDGFP51858 240 aaKnown RBP11.41□□□□□ -0.58
RAB8B-204ENST00000559006 PTGDRQ13258 359 aa11.38□□□□□ -0.59
RAB8B-204ENST00000559006 EYA1Q99502 592 aa11.38□□□□□ -0.59
RAB8B-204ENST00000559006 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
RAB8B-204ENST00000559006 TJAP1Q5JTD0 557 aa11.37□□□□□ -0.59
RAB8B-204ENST00000559006 NECTIN2Q92692 538 aa11.35□□□□□ -0.59
RAB8B-204ENST00000559006 SWT1Q5T5J6 900 aaKnown RBP11.34□□□□□ -0.59
RAB8B-204ENST00000559006 SLF2Q8IX21 1173 aa11.33□□□□□ -0.6
RAB8B-204ENST00000559006 SEMA3EO15041 775 aa11.32□□□□□ -0.6
RAB8B-204ENST00000559006 RNF40O75150 1001 aa11.32□□□□□ -0.6
RAB8B-204ENST00000559006 MTRQ99707 1265 aa11.32□□□□□ -0.6
RAB8B-204ENST00000559006 IRX2Q9BZI1 471 aaPredicted RBP11.32□□□□□ -0.6
RAB8B-204ENST00000559006 APLP1P51693 650 aa11.31□□□□□ -0.6
RAB8B-204ENST00000559006 IL21Q9HBE4 155 aa11.31□□□□□ -0.6
RAB8B-204ENST00000559006 NUTM2FA1L443 756 aa11.29□□□□□ -0.6
RAB8B-204ENST00000559006 SLC4A3P48751 1232 aa11.28□□□□□ -0.6
RAB8B-204ENST00000559006 ADGRG1Q9Y653 693 aa11.28□□□□□ -0.6
RAB8B-204ENST00000559006 RBM46Q8TBY0 533 aaKnown RBP11.27□□□□□ -0.61
RAB8B-204ENST00000559006 FCHSD2O94868 740 aa11.26□□□□□ -0.61
RAB8B-204ENST00000559006 DNAJB2P25686 324 aa11.26□□□□□ -0.61
RAB8B-204ENST00000559006 TESPA1A2RU30 521 aaPredicted RBP11.25□□□□□ -0.61
RAB8B-204ENST00000559006 ZNF516Q92618 1163 aa11.25□□□□□ -0.61
RAB8B-204ENST00000559006 TMEM134Q9H6X4 195 aa11.24□□□□□ -0.61
RAB8B-204ENST00000559006 PRR14Q9BWN1 585 aa11.23□□□□□ -0.61
RAB8B-204ENST00000559006 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
RAB8B-204ENST00000559006 PPP1R18Q6NYC8 613 aa11.21□□□□□ -0.61
RAB8B-204ENST00000559006 FAM161AQ3B820 660 aa11.2□□□□□ -0.62
RAB8B-204ENST00000559006 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
RAB8B-204ENST00000559006 HIC1Q14526 733 aa11.19□□□□□ -0.62
RAB8B-204ENST00000559006 COPS2P61201 443 aa11.18□□□□□ -0.62
RAB8B-204ENST00000559006 NKX2-3Q8TAU0 364 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms