RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 TTC37Q6PGP7 1564 aa8.68□□□□□ -1.02
IDH3A-206ENST00000558535 CANXP27824 592 aaKnown RBP8.67□□□□□ -1.02
IDH3A-206ENST00000558535 RICTORQ6R327 1708 aa8.67□□□□□ -1.02
IDH3A-206ENST00000558535 CDK13Q14004 1512 aaKnown RBP8.67□□□□□ -1.02
IDH3A-206ENST00000558535 FYCO1Q9BQS8 1478 aa8.67□□□□□ -1.02
IDH3A-206ENST00000558535 ZFYVE16Q7Z3T8 1539 aa8.67□□□□□ -1.02
IDH3A-206ENST00000558535 PDCL3Q9H2J4 239 aa8.67□□□□□ -1.02
IDH3A-206ENST00000558535 RAPGEF3O95398 923 aa8.66□□□□□ -1.02
IDH3A-206ENST00000558535 IPO9Q96P70 1041 aaKnown RBP8.66□□□□□ -1.02
IDH3A-206ENST00000558535 BCORL1Q5H9F3 1711 aa8.66□□□□□ -1.02
IDH3A-206ENST00000558535 MYO5CQ9NQX4 1742 aa8.66□□□□□ -1.02
IDH3A-206ENST00000558535 ANP32AP39687 249 aaKnown RBP8.66□□□□□ -1.02
IDH3A-206ENST00000558535 ZNF518AQ6AHZ1 1483 aa8.65□□□□□ -1.02
IDH3A-206ENST00000558535 FTSJ3Q8IY81 847 aaKnown RBP8.65□□□□□ -1.02
IDH3A-206ENST00000558535 MAP7D2Q96T17 732 aa8.65□□□□□ -1.02
IDH3A-206ENST00000558535 SCAPERQ9BY12 1400 aa8.65□□□□□ -1.03
IDH3A-206ENST00000558535 PTPRMP28827 1452 aa8.65□□□□□ -1.03
IDH3A-206ENST00000558535 ZBTB22O15209 634 aa8.65□□□□□ -1.03
IDH3A-206ENST00000558535 SAMD1Q6SPF0 538 aaPredicted RBP8.65□□□□□ -1.03
IDH3A-206ENST00000558535 HECW2Q9P2P5 1572 aa8.64□□□□□ -1.03
IDH3A-206ENST00000558535 ZBTB47Q9UFB7 747 aaPredicted RBP8.64□□□□□ -1.03
IDH3A-206ENST00000558535 TAOK2Q9UL54 1235 aa8.64□□□□□ -1.03
IDH3A-206ENST00000558535 REREQ9P2R6 1566 aa8.64□□□□□ -1.03
IDH3A-206ENST00000558535 NEFMP07197 916 aa8.64□□□□□ -1.03
IDH3A-206ENST00000558535 PRDM4Q9UKN5 801 aa8.64□□□□□ -1.03
IDH3A-206ENST00000558535 C9orf84Q5VXU9 1444 aa8.63□□□□□ -1.03
IDH3A-206ENST00000558535 ATP10AO60312 1499 aa8.63□□□□□ -1.03
IDH3A-206ENST00000558535 KDM5CP41229 1560 aa8.63□□□□□ -1.03
IDH3A-206ENST00000558535 GSE1Q14687 1217 aa8.62□□□□□ -1.03
IDH3A-206ENST00000558535 BBXQ8WY36 941 aaPredicted RBP8.62□□□□□ -1.03
IDH3A-206ENST00000558535 ARHGAP5Q13017 1502 aa8.62□□□□□ -1.03
IDH3A-206ENST00000558535 MLH3Q9UHC1 1453 aa8.62□□□□□ -1.03
IDH3A-206ENST00000558535 NBR1Q14596 966 aa8.62□□□□□ -1.03
IDH3A-206ENST00000558535 PCF11O94913 1555 aaKnown RBP8.61□□□□□ -1.03
IDH3A-206ENST00000558535 PLEKHH2Q8IVE3 1493 aa8.61□□□□□ -1.03
IDH3A-206ENST00000558535 ATP1B4Q9UN42 357 aaPredicted RBP8.61□□□□□ -1.03
IDH3A-206ENST00000558535 PREX2Q70Z35 1606 aa8.61□□□□□ -1.03
IDH3A-206ENST00000558535 PAXIP1Q6ZW49 1069 aaPredicted RBP8.6□□□□□ -1.03
IDH3A-206ENST00000558535 AGLP35573 1532 aa8.6□□□□□ -1.03
IDH3A-206ENST00000558535 TAF3Q5VWG9 929 aa8.6□□□□□ -1.03
IDH3A-206ENST00000558535 ARHGEF12Q9NZN5 1544 aa8.59□□□□□ -1.03
IDH3A-206ENST00000558535 MADDQ8WXG6 1647 aa8.59□□□□□ -1.03
IDH3A-206ENST00000558535 TPM2P07951 284 aa8.59□□□□□ -1.03
IDH3A-206ENST00000558535 KIAA1107Q9UPP5 1409 aa8.59□□□□□ -1.03
IDH3A-206ENST00000558535 ABCC1P33527 1531 aa8.59□□□□□ -1.03
IDH3A-206ENST00000558535 SMAP1Q8IYB5 467 aaPredicted RBP8.59□□□□□ -1.03
IDH3A-206ENST00000558535 BCANQ96GW7 911 aa8.59□□□□□ -1.03
IDH3A-206ENST00000558535 YEATS2Q9ULM3 1422 aa8.58□□□□□ -1.04
IDH3A-206ENST00000558535 MTERF4Q7Z6M4 381 aaKnown RBP8.58□□□□□ -1.04
IDH3A-206ENST00000558535 PTMSP20962 102 aa8.58□□□□□ -1.04
IDH3A-206ENST00000558535 UTP14CQ5TAP6 766 aaKnown RBP8.58□□□□□ -1.04
IDH3A-206ENST00000558535 PPP4R2Q9NY27 417 aa8.57□□□□□ -1.04
IDH3A-206ENST00000558535 GTF2E1P29083 439 aaPredicted RBP8.57□□□□□ -1.04
IDH3A-206ENST00000558535 CNTLNQ9NXG0 1405 aa8.56□□□□□ -1.04
IDH3A-206ENST00000558535 LRRIQ1Q96JM4 1722 aa8.56□□□□□ -1.04
IDH3A-206ENST00000558535 DHX37Q8IY37 1157 aaKnown RBP8.56□□□□□ -1.04
IDH3A-206ENST00000558535 ITSN2Q9NZM3 1697 aa8.56□□□□□ -1.04
IDH3A-206ENST00000558535 DIP2CQ9Y2E4 1556 aa8.55□□□□□ -1.04
IDH3A-206ENST00000558535 EHBP1L1Q8N3D4 1523 aa8.55□□□□□ -1.04
IDH3A-206ENST00000558535 RIMS1Q86UR5 1692 aaKnown RBP8.55□□□□□ -1.04
IDH3A-206ENST00000558535 LMTK3Q96Q04 1460 aa8.55□□□□□ -1.04
IDH3A-206ENST00000558535 STAC3Q96MF2 364 aa8.55□□□□□ -1.04
IDH3A-206ENST00000558535 CDC42BPBQ9Y5S2 1711 aa8.55□□□□□ -1.04
IDH3A-206ENST00000558535 GPATCH8Q9UKJ3 1502 aaKnown RBP8.54□□□□□ -1.04
IDH3A-206ENST00000558535 CEP162Q5TB80 1403 aa8.54□□□□□ -1.04
IDH3A-206ENST00000558535 CCNB3Q8WWL7 1395 aa8.54□□□□□ -1.04
IDH3A-206ENST00000558535 CCER2I3L3R5 266 aa8.54□□□□□ -1.04
IDH3A-206ENST00000558535 CLGNO14967 610 aa8.54□□□□□ -1.04
IDH3A-206ENST00000558535 PTMAP06454 111 aaKnown RBP8.54□□□□□ -1.04
IDH3A-206ENST00000558535 AXDND1Q5T1B0 1012 aaPredicted RBP8.54□□□□□ -1.04
IDH3A-206ENST00000558535 PPP6R1Q9UPN7 881 aa8.54□□□□□ -1.04
IDH3A-206ENST00000558535 FER1L4A9Z1Z3 1794 aa8.54□□□□□ -1.04
IDH3A-206ENST00000558535 MTUS2Q5JR59 1369 aa8.54□□□□□ -1.04
IDH3A-206ENST00000558535 CLCN1P35523 988 aa8.53□□□□□ -1.04
IDH3A-206ENST00000558535 TERF1P54274 439 aa8.53□□□□□ -1.04
IDH3A-206ENST00000558535 FAM135AQ9P2D6 1515 aa8.52□□□□□ -1.04
IDH3A-206ENST00000558535 CDC42BPAQ5VT25 1732 aa8.52□□□□□ -1.04
IDH3A-206ENST00000558535 TNNT2P45379 298 aaPredicted RBP8.52□□□□□ -1.05
IDH3A-206ENST00000558535 AFAP1Q8N556 730 aa8.52□□□□□ -1.05
IDH3A-206ENST00000558535 TRAPPC8Q9Y2L5 1435 aa8.52□□□□□ -1.05
IDH3A-206ENST00000558535 L1TD1Q5T7N2 865 aaKnown RBP8.52□□□□□ -1.05
IDH3A-206ENST00000558535 PNNQ9H307 717 aaKnown RBP8.52□□□□□ -1.05
IDH3A-206ENST00000558535 LAS1LQ9Y4W2 734 aaKnown RBP8.52□□□□□ -1.05
IDH3A-206ENST00000558535 RTEL1-TNFRSF6BF6WH68 1400 aa8.51□□□□□ -1.05
IDH3A-206ENST00000558535 SAMD9LQ8IVG5 1584 aa8.51□□□□□ -1.05
IDH3A-206ENST00000558535 ABCA6Q8N139 1617 aa8.51□□□□□ -1.05
IDH3A-206ENST00000558535 ZFP91Q96JP5 570 aaPredicted RBP8.51□□□□□ -1.05
IDH3A-206ENST00000558535 CFDP1Q9UEE9 299 aaPredicted RBP8.51□□□□□ -1.05
IDH3A-206ENST00000558535 BRPF3Q9ULD4 1205 aa8.51□□□□□ -1.05
IDH3A-206ENST00000558535 MAP3K1Q13233 1512 aa8.51□□□□□ -1.05
IDH3A-206ENST00000558535 ESF1Q9H501 851 aaKnown RBP8.51□□□□□ -1.05
IDH3A-206ENST00000558535 DMRT2Q9Y5R5 561 aa8.51□□□□□ -1.05
IDH3A-206ENST00000558535 NPATQ14207 1427 aa8.51□□□□□ -1.05
IDH3A-206ENST00000558535 SPAG9O60271 1321 aaKnown RBP8.5□□□□□ -1.05
IDH3A-206ENST00000558535 PREX1Q8TCU6 1659 aa8.5□□□□□ -1.05
IDH3A-206ENST00000558535 HAP1P54257 671 aaPredicted RBP8.5□□□□□ -1.05
IDH3A-206ENST00000558535 GOLGA6L3A6NEY3 463 aa8.5□□□□□ -1.05
IDH3A-206ENST00000558535 KIF20AO95235 890 aa8.5□□□□□ -1.05
IDH3A-206ENST00000558535 TRIM44Q96DX7 344 aaPredicted RBP8.5□□□□□ -1.05
IDH3A-206ENST00000558535 SYCP2Q9BX26 1530 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms