RNA–Protein interactions for RNA: ENST00000558449.1

AC012409.1-202, humanhuman

TSL 2 BASIC

Gene AC012409.1, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-202ENST00000558449 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
AC012409.1-202ENST00000558449 REPIN1Q9BWE0 567 aaKnown RBP12.44□□□□□ -0.42
AC012409.1-202ENST00000558449 KDM4FA0A1W2PPD8 638 aa12.43□□□□□ -0.42
AC012409.1-202ENST00000558449 MS4A1P11836 297 aa12.42□□□□□ -0.42
AC012409.1-202ENST00000558449 FBXW7Q969H0 707 aa12.42□□□□□ -0.42
AC012409.1-202ENST00000558449 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
AC012409.1-202ENST00000558449 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
AC012409.1-202ENST00000558449 FOSBP53539 338 aa12.39□□□□□ -0.43
AC012409.1-202ENST00000558449 TMUB1Q9BVT8 246 aa12.39□□□□□ -0.43
AC012409.1-202ENST00000558449 ZMYND15Q9H091 742 aa12.39□□□□□ -0.43
AC012409.1-202ENST00000558449 GOPCQ9HD26 462 aa12.39□□□□□ -0.43
AC012409.1-202ENST00000558449 CLCN1P35523 988 aa12.38□□□□□ -0.43
AC012409.1-202ENST00000558449 PHOX2BQ99453 314 aa12.37□□□□□ -0.43
AC012409.1-202ENST00000558449 MDM2Q00987 491 aaPredicted RBP12.36□□□□□ -0.43
AC012409.1-202ENST00000558449 C6orf132Q5T0Z8 1188 aa12.36□□□□□ -0.43
AC012409.1-202ENST00000558449 GPCPD1Q9NPB8 672 aa12.36□□□□□ -0.43
AC012409.1-202ENST00000558449 ZNF454Q8N9F8 522 aa12.35□□□□□ -0.43
AC012409.1-202ENST00000558449 CERKQ8TCT0 537 aa12.35□□□□□ -0.43
AC012409.1-202ENST00000558449 ZDHHC16Q969W1 377 aa12.35□□□□□ -0.43
AC012409.1-202ENST00000558449 FAM161AQ3B820 660 aa12.34□□□□□ -0.43
AC012409.1-202ENST00000558449 NUDT7P0C024 238 aa12.33□□□□□ -0.44
AC012409.1-202ENST00000558449 SSTR3P32745 418 aaPredicted RBP12.33□□□□□ -0.44
AC012409.1-202ENST00000558449 OATP04181 439 aa12.32□□□□□ -0.44
AC012409.1-202ENST00000558449 DOK7Q18PE1 504 aa12.32□□□□□ -0.44
AC012409.1-202ENST00000558449 ARSIQ5FYB1 569 aa12.32□□□□□ -0.44
AC012409.1-202ENST00000558449 PADI6Q6TGC4 694 aa12.32□□□□□ -0.44
AC012409.1-202ENST00000558449 KHSRPQ92945 711 aaKnown RBP eCLIP12.32□□□□□ -0.44
AC012409.1-202ENST00000558449 PCMTD1Q96MG8 357 aaPredicted RBP12.31□□□□□ -0.44
AC012409.1-202ENST00000558449 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
AC012409.1-202ENST00000558449 HOXB3P14651 431 aaPredicted RBP12.3□□□□□ -0.44
AC012409.1-202ENST00000558449 METTL3Q86U44 580 aaKnown RBP12.3□□□□□ -0.44
AC012409.1-202ENST00000558449 HOMEZQ8IX15 550 aa12.29□□□□□ -0.44
AC012409.1-202ENST00000558449 ADAM33Q9BZ11 813 aa12.29□□□□□ -0.44
AC012409.1-202ENST00000558449 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
AC012409.1-202ENST00000558449 ADGRG1Q9Y653 693 aa12.29□□□□□ -0.44
AC012409.1-202ENST00000558449 TTC13Q8NBP0 860 aa12.28□□□□□ -0.44
AC012409.1-202ENST00000558449 PXYLP1Q8TE99 480 aa12.28□□□□□ -0.44
AC012409.1-202ENST00000558449 NLRP7Q8WX94 980 aa12.28□□□□□ -0.44
AC012409.1-202ENST00000558449 RIMBP2O15034 1052 aa12.27□□□□□ -0.45
AC012409.1-202ENST00000558449 FLIIQ13045 1269 aa12.27□□□□□ -0.45
AC012409.1-202ENST00000558449 SH3D19Q5HYK7 790 aa12.27□□□□□ -0.45
AC012409.1-202ENST00000558449 GPR153Q6NV75 609 aa12.27□□□□□ -0.45
AC012409.1-202ENST00000558449 RBM27Q9P2N5 1060 aaKnown RBP12.27□□□□□ -0.45
AC012409.1-202ENST00000558449 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
AC012409.1-202ENST00000558449 ZSWIM6Q9HCJ5 1215 aa12.26□□□□□ -0.45
AC012409.1-202ENST00000558449 FAM217BQ9NTX9 383 aaPredicted RBP12.26□□□□□ -0.45
AC012409.1-202ENST00000558449 PRSS12P56730 875 aa12.24□□□□□ -0.45
AC012409.1-202ENST00000558449 POTEB2H3BUK9 544 aa12.23□□□□□ -0.45
AC012409.1-202ENST00000558449 SKIV2LQ15477 1246 aaKnown RBP12.23□□□□□ -0.45
AC012409.1-202ENST00000558449 CDCA7LQ96GN5 454 aa12.23□□□□□ -0.45
AC012409.1-202ENST00000558449 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
AC012409.1-202ENST00000558449 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.45
AC012409.1-202ENST00000558449 LHX6Q9UPM6 363 aa12.21□□□□□ -0.45
AC012409.1-202ENST00000558449 RBM46Q8TBY0 533 aaKnown RBP12.2□□□□□ -0.46
AC012409.1-202ENST00000558449 PROCA1Q8NCQ7 364 aaPredicted RBP12.18□□□□□ -0.46
AC012409.1-202ENST00000558449 SCUBE2Q9NQ36 999 aa12.18□□□□□ -0.46
AC012409.1-202ENST00000558449 PPP4R3BQ5MIZ7 849 aa12.17□□□□□ -0.46
AC012409.1-202ENST00000558449 POLR3EQ9NVU0 708 aa12.17□□□□□ -0.46
AC012409.1-202ENST00000558449 FAM198AQ9UFP1 575 aa12.17□□□□□ -0.46
AC012409.1-202ENST00000558449 ATP1B4Q9UN42 357 aaPredicted RBP12.17□□□□□ -0.46
AC012409.1-202ENST00000558449 COL9A1P20849 921 aa12.16□□□□□ -0.46
AC012409.1-202ENST00000558449 MAMSTRQ6ZN01 415 aa12.15□□□□□ -0.46
AC012409.1-202ENST00000558449 BCL2L12Q9HB09 334 aa12.15□□□□□ -0.46
AC012409.1-202ENST00000558449 PSDA5PKW4 1024 aaPredicted RBP12.14□□□□□ -0.47
AC012409.1-202ENST00000558449 MYSM1Q5VVJ2 828 aa12.14□□□□□ -0.47
AC012409.1-202ENST00000558449 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
AC012409.1-202ENST00000558449 EYA1Q99502 592 aa12.13□□□□□ -0.47
AC012409.1-202ENST00000558449 RCCD1A6NED2 376 aa12.12□□□□□ -0.47
AC012409.1-202ENST00000558449 TBC1D2Q9BYX2 928 aa12.12□□□□□ -0.47
AC012409.1-202ENST00000558449 PTPREP23469 700 aa12.11□□□□□ -0.47
AC012409.1-202ENST00000558449 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
AC012409.1-202ENST00000558449 PPP1R3GB7ZBB8 358 aa12.1□□□□□ -0.47
AC012409.1-202ENST00000558449 DIXDC1Q155Q3 683 aa12.1□□□□□ -0.47
AC012409.1-202ENST00000558449 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.1□□□□□ -0.47
AC012409.1-202ENST00000558449 CLK2P49760 499 aaKnown RBP12.09□□□□□ -0.47
AC012409.1-202ENST00000558449 MCM6Q14566 821 aa12.09□□□□□ -0.47
AC012409.1-202ENST00000558449 NUDT18Q6ZVK8 323 aa12.09□□□□□ -0.47
AC012409.1-202ENST00000558449 CLUAP1Q96AJ1 413 aa12.09□□□□□ -0.47
AC012409.1-202ENST00000558449 A6NJR5 290 aa12.08□□□□□ -0.48
AC012409.1-202ENST00000558449 UBTFP17480 764 aaKnown RBP12.08□□□□□ -0.48
AC012409.1-202ENST00000558449 C3orf80F5H4A9 247 aa12.07□□□□□ -0.48
AC012409.1-202ENST00000558449 C1orf115Q9H7X2 142 aa12.07□□□□□ -0.48
AC012409.1-202ENST00000558449 SNPHO15079 494 aa12.06□□□□□ -0.48
AC012409.1-202ENST00000558449 HOXB1P14653 301 aaPredicted RBP12.06□□□□□ -0.48
AC012409.1-202ENST00000558449 TATDN2Q93075 761 aa12.06□□□□□ -0.48
AC012409.1-202ENST00000558449 PNMA3Q9UL41 463 aa12.06□□□□□ -0.48
AC012409.1-202ENST00000558449 ARID3CA6NKF2 412 aa12.05□□□□□ -0.48
AC012409.1-202ENST00000558449 TRIM6-TRIM34B2RNG4 842 aa12.05□□□□□ -0.48
AC012409.1-202ENST00000558449 APBB1O00213 710 aa12.05□□□□□ -0.48
AC012409.1-202ENST00000558449 CD46P15529 392 aa12.05□□□□□ -0.48
AC012409.1-202ENST00000558449 DNAJB2P25686 324 aa12.05□□□□□ -0.48
AC012409.1-202ENST00000558449 PACS2Q86VP3 889 aa12.05□□□□□ -0.48
AC012409.1-202ENST00000558449 SPIRE2Q8WWL2 714 aa12.05□□□□□ -0.48
AC012409.1-202ENST00000558449 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
AC012409.1-202ENST00000558449 TRAK2O60296 914 aa12.03□□□□□ -0.48
AC012409.1-202ENST00000558449 SULF1Q8IWU6 871 aa12.03□□□□□ -0.48
AC012409.1-202ENST00000558449 ARID3AQ99856 593 aa12.03□□□□□ -0.48
AC012409.1-202ENST00000558449 LIMD1Q9UGP4 676 aa12.03□□□□□ -0.48
AC012409.1-202ENST00000558449 DDX11L8A8MPP1 907 aa12.02□□□□□ -0.49
AC012409.1-202ENST00000558449 RIC3Q7Z5B4 369 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms