RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 STK11IPQ8N1F8 1099 aa4.56□□□□□ -1.68
ATXN3-248ENST00000558190 SF3A1Q15459 793 aaKnown RBP4.56□□□□□ -1.68
ATXN3-248ENST00000558190 TPM4P67936 248 aa4.55□□□□□ -1.68
ATXN3-248ENST00000558190 LETM1O95202 739 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-248ENST00000558190 PDILTQ8N807 584 aa4.55□□□□□ -1.68
ATXN3-248ENST00000558190 CDCA7LQ96GN5 454 aa4.55□□□□□ -1.68
ATXN3-248ENST00000558190 PHF14O94880 888 aa4.55□□□□□ -1.68
ATXN3-248ENST00000558190 GTPBP4Q9BZE4 634 aaKnown RBP4.55□□□□□ -1.68
ATXN3-248ENST00000558190 GORABQ5T7V8 394 aa4.55□□□□□ -1.68
ATXN3-248ENST00000558190 GRPEL1Q9HAV7 217 aa4.55□□□□□ -1.68
ATXN3-248ENST00000558190 CDCA8Q53HL2 280 aa4.55□□□□□ -1.68
ATXN3-248ENST00000558190 IFT57Q9NWB7 429 aa4.55□□□□□ -1.68
ATXN3-248ENST00000558190 STAG3Q9UJ98 1225 aa4.55□□□□□ -1.68
ATXN3-248ENST00000558190 CWC15Q9P013 229 aaKnown RBP4.54□□□□□ -1.68
ATXN3-248ENST00000558190 COG6Q9Y2V7 657 aa4.54□□□□□ -1.68
ATXN3-248ENST00000558190 ELL2O00472 640 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-248ENST00000558190 ITPRIPQ8IWB1 547 aa4.54□□□□□ -1.68
ATXN3-248ENST00000558190 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-248ENST00000558190 ZFP91Q96JP5 570 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-248ENST00000558190 BECN2A8MW95 431 aa4.54□□□□□ -1.68
ATXN3-248ENST00000558190 TRIM5Q9C035 493 aa4.54□□□□□ -1.68
ATXN3-248ENST00000558190 ERICH4A6NGS2 130 aa4.54□□□□□ -1.68
ATXN3-248ENST00000558190 U2AF1L5P0DN76 240 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-248ENST00000558190 U2AF1Q01081 240 aaKnown RBP eCLIP4.54□□□□□ -1.68
ATXN3-248ENST00000558190 KIF3AQ9Y496 699 aa4.54□□□□□ -1.68
ATXN3-248ENST00000558190 TRIM6-TRIM34B2RNG4 842 aa4.54□□□□□ -1.68
ATXN3-248ENST00000558190 POGKQ9P215 609 aa4.54□□□□□ -1.68
ATXN3-248ENST00000558190 PDCL2Q8N4E4 241 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 SDF4Q9BRK5 362 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 FOXD1Q16676 465 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 DCAF11Q8TEB1 546 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 RDXP35241 583 aaKnown RBP4.53□□□□□ -1.68
ATXN3-248ENST00000558190 XPCQ01831 940 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-248ENST00000558190 CFAP44Q96MT7 982 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 CCDC66A2RUB6 948 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 SPC24Q8NBT2 197 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 ZSCAN30Q86W11 494 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 ZNF526Q8TF50 670 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-248ENST00000558190 CGNQ9P2M7 1197 aaKnown RBP4.53□□□□□ -1.68
ATXN3-248ENST00000558190 DHX37Q8IY37 1157 aaKnown RBP4.53□□□□□ -1.68
ATXN3-248ENST00000558190 UQCRHLA0A096LP55 91 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 GOLGA6L19H0YKK7 550 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 UQCRHP07919 91 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 CCDC146Q8IYE0 955 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 CCDC173Q0VFZ6 552 aa4.53□□□□□ -1.68
ATXN3-248ENST00000558190 ZNF830Q96NB3 372 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-248ENST00000558190 RRP7AQ9Y3A4 280 aaKnown RBP4.52□□□□□ -1.69
ATXN3-248ENST00000558190 AK7Q96M32 723 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 TICAM2Q86XR7 235 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 CERS3Q8IU89 383 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 PANK1Q8TE04 598 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 NOL10Q9BSC4 688 aaKnown RBP4.52□□□□□ -1.69
ATXN3-248ENST00000558190 ST18O60284 1047 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 OFD1O75665 1012 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 CWC22Q9HCG8 908 aaKnown RBP4.52□□□□□ -1.69
ATXN3-248ENST00000558190 FMNL2Q96PY5 1086 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 TSPY26PQ9H489 355 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 L3MBTL2Q969R5 705 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 TIGD1Q96MW7 591 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 CCDC112Q8NEF3 446 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 HSP90B2PQ58FF3 399 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 APAF1O14727 1248 aa4.52□□□□□ -1.69
ATXN3-248ENST00000558190 RSPH4AQ5TD94 716 aa4.51□□□□□ -1.69
ATXN3-248ENST00000558190 MNS1Q8NEH6 495 aa4.51□□□□□ -1.69
ATXN3-248ENST00000558190 SASS6Q6UVJ0 657 aa4.51□□□□□ -1.69
ATXN3-248ENST00000558190 AEBP1Q8IUX7 1158 aa4.51□□□□□ -1.69
ATXN3-248ENST00000558190 PDZRN3Q9UPQ7 1066 aa4.51□□□□□ -1.69
ATXN3-248ENST00000558190 CLGNO14967 610 aa4.51□□□□□ -1.69
ATXN3-248ENST00000558190 ADAMTS8Q9UP79 889 aa4.51□□□□□ -1.69
ATXN3-248ENST00000558190 RBM25P49756 843 aaKnown RBP4.51□□□□□ -1.69
ATXN3-248ENST00000558190 LMOD3Q0VAK6 560 aa4.51□□□□□ -1.69
ATXN3-248ENST00000558190 CCDC70Q6NSX1 233 aa4.51□□□□□ -1.69
ATXN3-248ENST00000558190 MPHOSPH9Q99550 1183 aa4.5□□□□□ -1.69
ATXN3-248ENST00000558190 GTF2F1P35269 517 aaKnown RBP eCLIP4.5□□□□□ -1.69
ATXN3-248ENST00000558190 NAP1L1P55209 391 aaKnown RBP4.5□□□□□ -1.69
ATXN3-248ENST00000558190 NOLC1Q14978 699 aaKnown RBP eCLIP4.5□□□□□ -1.69
ATXN3-248ENST00000558190 CAVIN1Q6NZI2 390 aaKnown RBP4.5□□□□□ -1.69
ATXN3-248ENST00000558190 ERCC4Q92889 916 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-248ENST00000558190 NEK4P51957 841 aa4.5□□□□□ -1.69
ATXN3-248ENST00000558190 KANK4Q5T7N3 995 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-248ENST00000558190 H0YHG0 523 aa4.5□□□□□ -1.69
ATXN3-248ENST00000558190 H3BQV1 296 aa4.5□□□□□ -1.69
ATXN3-248ENST00000558190 IFFO2Q5TF58 517 aa4.5□□□□□ -1.69
ATXN3-248ENST00000558190 VGLL3A8MV65 326 aa4.5□□□□□ -1.69
ATXN3-248ENST00000558190 TPM1P09493 284 aa4.49□□□□□ -1.69
ATXN3-248ENST00000558190 PABPN1Q86U42 306 aaKnown RBP eCLIP4.49□□□□□ -1.69
ATXN3-248ENST00000558190 RILPL2Q969X0 211 aa4.49□□□□□ -1.69
ATXN3-248ENST00000558190 ATP6V1DQ9Y5K8 247 aa4.49□□□□□ -1.69
ATXN3-248ENST00000558190 UBXN4Q92575 508 aa4.49□□□□□ -1.69
ATXN3-248ENST00000558190 DNAJC2Q99543 621 aaKnown RBP4.49□□□□□ -1.69
ATXN3-248ENST00000558190 IRX3P78415 501 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-248ENST00000558190 ARGLU1Q9NWB6 273 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-248ENST00000558190 CENPHQ9H3R5 247 aa4.49□□□□□ -1.69
ATXN3-248ENST00000558190 CALCOCO1Q9P1Z2 691 aa4.49□□□□□ -1.69
ATXN3-248ENST00000558190 PLPPR3Q6T4P5 718 aa4.49□□□□□ -1.69
ATXN3-248ENST00000558190 DYNC1I1O14576 645 aa4.49□□□□□ -1.69
ATXN3-248ENST00000558190 OGFRQ9NZT2 677 aa4.48□□□□□ -1.69
ATXN3-248ENST00000558190 BAZ1BQ9UIG0 1483 aaKnown RBP4.48□□□□□ -1.69
ATXN3-248ENST00000558190 TRMT1Q9NXH9 659 aaKnown RBP4.48□□□□□ -1.69
ATXN3-248ENST00000558190 PNISRQ8TF01 805 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms