RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SIN3AQ96ST3 1273 aa10.47□□□□□ -0.73
CHD8-213ENST00000557364 NBR1Q14596 966 aa10.47□□□□□ -0.73
CHD8-213ENST00000557364 CHMP3Q9Y3E7 222 aa10.47□□□□□ -0.73
CHD8-213ENST00000557364 FRAT2O75474 233 aaPredicted RBP10.47□□□□□ -0.73
CHD8-213ENST00000557364 HSP90B1P14625 803 aaKnown RBP10.46□□□□□ -0.73
CHD8-213ENST00000557364 RGS3P49796 1198 aa10.46□□□□□ -0.73
CHD8-213ENST00000557364 USP35Q9P2H5 1018 aa10.46□□□□□ -0.74
CHD8-213ENST00000557364 ATF3P18847 181 aa10.46□□□□□ -0.74
CHD8-213ENST00000557364 PDE3BQ13370 1112 aa10.46□□□□□ -0.74
CHD8-213ENST00000557364 NEXNQ0ZGT2 675 aa10.45□□□□□ -0.74
CHD8-213ENST00000557364 MIA2Q96PC5 1412 aa10.45□□□□□ -0.74
CHD8-213ENST00000557364 TTC5Q8N0Z6 440 aa10.45□□□□□ -0.74
CHD8-213ENST00000557364 FHOD3Q2V2M9 1422 aa10.44□□□□□ -0.74
CHD8-213ENST00000557364 SUPT16HQ9Y5B9 1047 aaKnown RBP10.44□□□□□ -0.74
CHD8-213ENST00000557364 IRX6P78412 446 aaPredicted RBP10.44□□□□□ -0.74
CHD8-213ENST00000557364 MYOM3Q5VTT5 1437 aa10.44□□□□□ -0.74
CHD8-213ENST00000557364 SMC4Q9NTJ3 1288 aa10.44□□□□□ -0.74
CHD8-213ENST00000557364 NLRP13Q86W25 1043 aa10.44□□□□□ -0.74
CHD8-213ENST00000557364 TRIM34Q9BYJ4 488 aa10.43□□□□□ -0.74
CHD8-213ENST00000557364 ITPRIPQ8IWB1 547 aa10.43□□□□□ -0.74
CHD8-213ENST00000557364 GBP4Q96PP9 640 aa10.43□□□□□ -0.74
CHD8-213ENST00000557364 HSPA5P11021 654 aaKnown RBP10.43□□□□□ -0.74
CHD8-213ENST00000557364 FAM69CQ0P6D2 419 aa10.43□□□□□ -0.74
CHD8-213ENST00000557364 TEFQ10587 303 aa10.43□□□□□ -0.74
CHD8-213ENST00000557364 RAB3GAP2Q9H2M9 1393 aa10.42□□□□□ -0.74
CHD8-213ENST00000557364 KIF15Q9NS87 1388 aa10.42□□□□□ -0.74
CHD8-213ENST00000557364 PSME1Q06323 249 aa10.42□□□□□ -0.74
CHD8-213ENST00000557364 POGZQ7Z3K3 1410 aa10.42□□□□□ -0.74
CHD8-213ENST00000557364 PLEKHH2Q8IVE3 1493 aa10.42□□□□□ -0.74
CHD8-213ENST00000557364 ROCK1Q13464 1354 aa10.41□□□□□ -0.74
CHD8-213ENST00000557364 DDX58O95786 925 aaKnown RBP10.41□□□□□ -0.74
CHD8-213ENST00000557364 GRIN2BQ13224 1484 aa10.41□□□□□ -0.74
CHD8-213ENST00000557364 PLCB2Q00722 1185 aa10.41□□□□□ -0.74
CHD8-213ENST00000557364 TAOK2Q9UL54 1235 aa10.4□□□□□ -0.74
CHD8-213ENST00000557364 DHX57Q6P158 1386 aaKnown RBP10.4□□□□□ -0.74
CHD8-213ENST00000557364 CTDP1Q9Y5B0 961 aaPredicted RBP10.4□□□□□ -0.74
CHD8-213ENST00000557364 SYNJ2O15056 1496 aa10.4□□□□□ -0.75
CHD8-213ENST00000557364 DRC7Q8IY82 874 aa10.39□□□□□ -0.75
CHD8-213ENST00000557364 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
CHD8-213ENST00000557364 NCAPD3P42695 1498 aa10.39□□□□□ -0.75
CHD8-213ENST00000557364 TCERG1O14776 1098 aaKnown RBP10.38□□□□□ -0.75
CHD8-213ENST00000557364 TCEAL9Q9UHQ7 104 aa10.38□□□□□ -0.75
CHD8-213ENST00000557364 RASSF8Q8NHQ8 419 aa10.38□□□□□ -0.75
CHD8-213ENST00000557364 CEP89Q96ST8 783 aa10.38□□□□□ -0.75
CHD8-213ENST00000557364 RCAN3Q9UKA8 241 aa10.38□□□□□ -0.75
CHD8-213ENST00000557364 CPLX2Q6PUV4 134 aaKnown RBP10.38□□□□□ -0.75
CHD8-213ENST00000557364 MARCH6O60337 910 aa10.38□□□□□ -0.75
CHD8-213ENST00000557364 SCAPERQ9BY12 1400 aa10.38□□□□□ -0.75
CHD8-213ENST00000557364 RRBP1Q9P2E9 1410 aaKnown RBP10.37□□□□□ -0.75
CHD8-213ENST00000557364 CENPJQ9HC77 1338 aaPredicted RBP10.37□□□□□ -0.75
CHD8-213ENST00000557364 AKAP17AQ02040 695 aaKnown RBP10.37□□□□□ -0.75
CHD8-213ENST00000557364 MSH5O43196 834 aa10.37□□□□□ -0.75
CHD8-213ENST00000557364 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
CHD8-213ENST00000557364 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.37□□□□□ -0.757e-6■■■■□ 19.6
CHD8-213ENST00000557364 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
CHD8-213ENST00000557364 PHF14O94880 888 aa10.37□□□□□ -0.75
CHD8-213ENST00000557364 GPRASP1Q5JY77 1395 aa10.37□□□□□ -0.75
CHD8-213ENST00000557364 IFT140Q96RY7 1462 aa10.37□□□□□ -0.75
CHD8-213ENST00000557364 SYNE3Q6ZMZ3 975 aa10.36□□□□□ -0.75
CHD8-213ENST00000557364 KIF16BQ96L93 1317 aa10.36□□□□□ -0.75
CHD8-213ENST00000557364 TRAK1Q9UPV9 953 aa10.35□□□□□ -0.75
CHD8-213ENST00000557364 KIF21BO75037 1637 aa10.35□□□□□ -0.75
CHD8-213ENST00000557364 LTV1Q96GA3 475 aaPredicted RBP10.35□□□□□ -0.75
CHD8-213ENST00000557364 ST18O60284 1047 aa10.35□□□□□ -0.75
CHD8-213ENST00000557364 SF3B2Q13435 895 aaKnown RBP10.35□□□□□ -0.75
CHD8-213ENST00000557364 NOC3LQ8WTT2 800 aaKnown RBP10.35□□□□□ -0.75
CHD8-213ENST00000557364 FYCO1Q9BQS8 1478 aa10.35□□□□□ -0.75
CHD8-213ENST00000557364 ARHGAP5Q13017 1502 aa10.35□□□□□ -0.75
CHD8-213ENST00000557364 RUFY2Q8WXA3 655 aa10.35□□□□□ -0.75
CHD8-213ENST00000557364 ATP6V1DQ9Y5K8 247 aa10.35□□□□□ -0.75
CHD8-213ENST00000557364 RAPGEF4Q8WZA2 1011 aa10.34□□□□□ -0.75
CHD8-213ENST00000557364 MSNP26038 577 aaKnown RBP10.34□□□□□ -0.75
CHD8-213ENST00000557364 VPS37DQ86XT2 251 aa10.34□□□□□ -0.75
CHD8-213ENST00000557364 SMG6Q86US8 1419 aaKnown RBP10.34□□□□□ -0.75
CHD8-213ENST00000557364 TPRNQ4KMQ1 711 aa10.34□□□□□ -0.75
CHD8-213ENST00000557364 SLC4A10Q6U841 1118 aa10.34□□□□□ -0.75
CHD8-213ENST00000557364 MYBBP1AQ9BQG0 1328 aaKnown RBP10.34□□□□□ -0.75
CHD8-213ENST00000557364 TPM2P07951 284 aa10.33□□□□□ -0.76
CHD8-213ENST00000557364 THEMISQ8N1K5 641 aaPredicted RBP10.33□□□□□ -0.76
CHD8-213ENST00000557364 HSP90AB4PQ58FF6 505 aa10.33□□□□□ -0.76
CHD8-213ENST00000557364 VPS53Q5VIR6 699 aa10.32□□□□□ -0.76
CHD8-213ENST00000557364 CWC22Q9HCG8 908 aaKnown RBP10.32□□□□□ -0.76
CHD8-213ENST00000557364 APBB1O00213 710 aa10.32□□□□□ -0.76
CHD8-213ENST00000557364 C9orf78Q9NZ63 289 aaPredicted RBP10.32□□□□□ -0.76
CHD8-213ENST00000557364 KANK4Q5T7N3 995 aaPredicted RBP10.32□□□□□ -0.76
CHD8-213ENST00000557364 TOMM22Q9NS69 142 aa10.32□□□□□ -0.76
CHD8-213ENST00000557364 EFCAB5A4FU69 1503 aa10.32□□□□□ -0.76
CHD8-213ENST00000557364 E9PSI1 815 aa10.31□□□□□ -0.76
CHD8-213ENST00000557364 L3MBTL2Q969R5 705 aa10.31□□□□□ -0.76
CHD8-213ENST00000557364 NOP58Q9Y2X3 529 aaKnown RBP10.31□□□□□ -0.76
CHD8-213ENST00000557364 CCDC47Q96A33 483 aaKnown RBP10.31□□□□□ -0.76
CHD8-213ENST00000557364 AAMPQ13685 434 aa10.31□□□□□ -0.76
CHD8-213ENST00000557364 RBM33Q96EV2 1170 aaKnown RBP10.31□□□□□ -0.76
CHD8-213ENST00000557364 TSR1Q2NL82 804 aaKnown RBP10.3□□□□□ -0.76
CHD8-213ENST00000557364 HMGXB3Q12766 1538 aa10.3□□□□□ -0.76
CHD8-213ENST00000557364 PHF23Q9BUL5 403 aaPredicted RBP10.3□□□□□ -0.76
CHD8-213ENST00000557364 KRI1Q8N9T8 703 aaKnown RBP10.29□□□□□ -0.76
CHD8-213ENST00000557364 API5Q9BZZ5 524 aaKnown RBP10.29□□□□□ -0.76
CHD8-213ENST00000557364 DIAPH1O60610 1272 aaKnown RBP10.29□□□□□ -0.76
CHD8-213ENST00000557364 NCBP3Q53F19 620 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms