RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
FOXN3-213ENST00000556916 CFAP44Q96MT7 982 aa9.11□□□□□ -0.95
FOXN3-213ENST00000556916 NBPF3Q9H094 633 aa9.11□□□□□ -0.95
FOXN3-213ENST00000556916 PTPN5P54829 565 aa9.1□□□□□ -0.95
FOXN3-213ENST00000556916 GOLGA8CPA6NN73 597 aa9.09□□□□□ -0.95
FOXN3-213ENST00000556916 THSD4Q6ZMP0 1018 aa9.09□□□□□ -0.95
FOXN3-213ENST00000556916 DDX12PQ92771 950 aa9.09□□□□□ -0.95
FOXN3-213ENST00000556916 EPAS1Q99814 870 aa9.08□□□□□ -0.96
FOXN3-213ENST00000556916 PDIA6Q15084 440 aa9.07□□□□□ -0.96
FOXN3-213ENST00000556916 WNT2BQ93097 391 aa9.07□□□□□ -0.96
FOXN3-213ENST00000556916 RBM33Q96EV2 1170 aaKnown RBP9.06□□□□□ -0.96
FOXN3-213ENST00000556916 NBR1Q14596 966 aa9.05□□□□□ -0.96
FOXN3-213ENST00000556916 C6orf132Q5T0Z8 1188 aa9.05□□□□□ -0.96
FOXN3-213ENST00000556916 RABGEF1Q9UJ41 708 aa9.05□□□□□ -0.96
FOXN3-213ENST00000556916 E2F4Q16254 413 aa9.03□□□□□ -0.96
FOXN3-213ENST00000556916 EN1Q05925 392 aaPredicted RBP9.02□□□□□ -0.97
FOXN3-213ENST00000556916 ANKK1Q8NFD2 765 aa9.01□□□□□ -0.97
FOXN3-213ENST00000556916 WDR70Q9NW82 654 aa9.01□□□□□ -0.97
FOXN3-213ENST00000556916 KIAA1468Q9P260 1216 aa9.01□□□□□ -0.97
FOXN3-213ENST00000556916 SPDYE16A6NNV3 312 aaPredicted RBP9□□□□□ -0.97
FOXN3-213ENST00000556916 MAP3K7O43318 606 aa9□□□□□ -0.97
FOXN3-213ENST00000556916 TSR1Q2NL82 804 aaKnown RBP9□□□□□ -0.97
FOXN3-213ENST00000556916 SEPT9Q9UHD8 586 aaPredicted RBP9□□□□□ -0.97
FOXN3-213ENST00000556916 TRIM6-TRIM34B2RNG4 842 aa8.99□□□□□ -0.97
FOXN3-213ENST00000556916 BCAMP50895 628 aa8.98□□□□□ -0.97
FOXN3-213ENST00000556916 LAPTM4BQ86VI4 370 aa8.98□□□□□ -0.97
FOXN3-213ENST00000556916 ARIH1Q9Y4X5 557 aaPredicted RBP8.97□□□□□ -0.97
FOXN3-213ENST00000556916 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.98
FOXN3-213ENST00000556916 ZFRQ96KR1 1074 aaKnown RBP8.96□□□□□ -0.98
FOXN3-213ENST00000556916 ONECUT3O60422 494 aaPredicted RBP8.95□□□□□ -0.98
FOXN3-213ENST00000556916 PRIM1P49642 420 aaKnown RBP8.95□□□□□ -0.98
FOXN3-213ENST00000556916 SOWAHBA6NEL2 793 aa8.94□□□□□ -0.98
FOXN3-213ENST00000556916 FAM98CQ17RN3 349 aaKnown RBP8.93□□□□□ -0.98
FOXN3-213ENST00000556916 TSKSQ9UJT2 592 aa8.93□□□□□ -0.98
FOXN3-213ENST00000556916 CDHR5Q9HBB8 845 aa8.91□□□□□ -0.98
FOXN3-213ENST00000556916 IFFO2Q5TF58 517 aa8.9□□□□□ -0.98
FOXN3-213ENST00000556916 PACS2Q86VP3 889 aa8.9□□□□□ -0.98
FOXN3-213ENST00000556916 TSHZ2Q9NRE2 1034 aa8.9□□□□□ -0.98
FOXN3-213ENST00000556916 A0A0G2JS52 829 aa8.89□□□□□ -0.99
FOXN3-213ENST00000556916 CDCA7LQ96GN5 454 aa8.89□□□□□ -0.99
FOXN3-213ENST00000556916 LRCH3Q96II8 777 aa8.89□□□□□ -0.99
FOXN3-213ENST00000556916 WBP1LQ9NX94 342 aa8.89□□□□□ -0.99
FOXN3-213ENST00000556916 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.89□□□□□ -0.99
FOXN3-213ENST00000556916 OSBPP22059 807 aa8.88□□□□□ -0.99
FOXN3-213ENST00000556916 PRSS12P56730 875 aa8.88□□□□□ -0.99
FOXN3-213ENST00000556916 FAM198AQ9UFP1 575 aa8.88□□□□□ -0.99
FOXN3-213ENST00000556916 SMAPO00193 183 aa8.87□□□□□ -0.99
FOXN3-213ENST00000556916 CERKQ8TCT0 537 aa8.87□□□□□ -0.99
FOXN3-213ENST00000556916 HPS5Q9UPZ3 1129 aa8.87□□□□□ -0.99
FOXN3-213ENST00000556916 NYAP1Q6ZVC0 841 aa8.86□□□□□ -0.99
FOXN3-213ENST00000556916 NBPF26B4DH59 902 aa8.85□□□□□ -0.99
FOXN3-213ENST00000556916 C3orf80F5H4A9 247 aa8.85□□□□□ -0.99
FOXN3-213ENST00000556916 ITGBL1O95965 494 aaPredicted RBP8.85□□□□□ -0.99
FOXN3-213ENST00000556916 KCNV2Q8TDN2 545 aa8.85□□□□□ -0.99
FOXN3-213ENST00000556916 TSR3Q9UJK0 312 aaKnown RBP8.85□□□□□ -0.99
FOXN3-213ENST00000556916 PNMA3Q9UL41 463 aa8.84□□□□□ -0.99
FOXN3-213ENST00000556916 SAMD7Q7Z3H4 446 aa8.82□□□□□ -1
FOXN3-213ENST00000556916 TATDN2Q93075 761 aa8.82□□□□□ -1
FOXN3-213ENST00000556916 RBM27Q9P2N5 1060 aaKnown RBP8.82□□□□□ -1
FOXN3-213ENST00000556916 MLLT3P42568 568 aaPredicted RBP8.8□□□□□ -1
FOXN3-213ENST00000556916 PADI6Q6TGC4 694 aa8.8□□□□□ -1
FOXN3-213ENST00000556916 RGS20O76081 388 aa8.79□□□□□ -1
FOXN3-213ENST00000556916 PPP4CP60510 307 aa8.79□□□□□ -1
FOXN3-213ENST00000556916 KCNC4Q03721 635 aa8.79□□□□□ -1
FOXN3-213ENST00000556916 NUDT18Q6ZVK8 323 aa8.79□□□□□ -1
FOXN3-213ENST00000556916 ARHGEF1Q92888 912 aaKnown RBP8.79□□□□□ -1
FOXN3-213ENST00000556916 RNF40O75150 1001 aa8.78□□□□□ -1
FOXN3-213ENST00000556916 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
FOXN3-213ENST00000556916 TTC13Q8NBP0 860 aa8.76□□□□□ -1.01
FOXN3-213ENST00000556916 P3H3Q8IVL6 736 aa8.74□□□□□ -1.01
FOXN3-213ENST00000556916 SWT1Q5T5J6 900 aaKnown RBP8.72□□□□□ -1.01
FOXN3-213ENST00000556916 IRX2Q9BZI1 471 aaPredicted RBP8.72□□□□□ -1.01
FOXN3-213ENST00000556916 HDGFP51858 240 aaKnown RBP8.71□□□□□ -1.02
FOXN3-213ENST00000556916 TJAP1Q5JTD0 557 aa8.7□□□□□ -1.02
FOXN3-213ENST00000556916 MTRQ99707 1265 aa8.7□□□□□ -1.02
FOXN3-213ENST00000556916 APLP1P51693 650 aa8.69□□□□□ -1.02
FOXN3-213ENST00000556916 PTGDRQ13258 359 aa8.69□□□□□ -1.02
FOXN3-213ENST00000556916 NUTM2FA1L443 756 aa8.68□□□□□ -1.02
FOXN3-213ENST00000556916 PLCB2Q00722 1185 aa8.68□□□□□ -1.02
FOXN3-213ENST00000556916 SLF2Q8IX21 1173 aa8.68□□□□□ -1.02
FOXN3-213ENST00000556916 IL21Q9HBE4 155 aa8.68□□□□□ -1.02
FOXN3-213ENST00000556916 SEMA3EO15041 775 aa8.67□□□□□ -1.02
FOXN3-213ENST00000556916 EYA1Q99502 592 aa8.67□□□□□ -1.02
FOXN3-213ENST00000556916 NECTIN2Q92692 538 aa8.66□□□□□ -1.02
FOXN3-213ENST00000556916 DNAJB2P25686 324 aa8.64□□□□□ -1.03
FOXN3-213ENST00000556916 SLC4A3P48751 1232 aa8.64□□□□□ -1.03
FOXN3-213ENST00000556916 ZNF516Q92618 1163 aa8.64□□□□□ -1.03
FOXN3-213ENST00000556916 ADGRG1Q9Y653 693 aa8.64□□□□□ -1.03
FOXN3-213ENST00000556916 COPS2P61201 443 aa8.63□□□□□ -1.03
FOXN3-213ENST00000556916 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
FOXN3-213ENST00000556916 RBM46Q8TBY0 533 aaKnown RBP8.63□□□□□ -1.03
FOXN3-213ENST00000556916 FCHSD2O94868 740 aa8.61□□□□□ -1.03
FOXN3-213ENST00000556916 TMEM134Q9H6X4 195 aa8.61□□□□□ -1.03
FOXN3-213ENST00000556916 PPP1R18Q6NYC8 613 aa8.6□□□□□ -1.03
FOXN3-213ENST00000556916 RCCD1A6NED2 376 aa8.59□□□□□ -1.03
FOXN3-213ENST00000556916 NKX2-3Q8TAU0 364 aa8.59□□□□□ -1.03
FOXN3-213ENST00000556916 PRR14Q9BWN1 585 aa8.59□□□□□ -1.03
FOXN3-213ENST00000556916 PCDHB3Q9Y5E6 796 aa8.59□□□□□ -1.03
FOXN3-213ENST00000556916 TESPA1A2RU30 521 aaPredicted RBP8.58□□□□□ -1.04
FOXN3-213ENST00000556916 RBM26Q5T8P6 1007 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms